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World J Gastrointest Pharmacol Ther. Dec 5, 2025; 16(4): 110271
Published online Dec 5, 2025. doi: 10.4292/wjgpt.v16.i4.110271
Targeting gut microbiota in liver disease: A pharmacological approach for hepatic encephalopathy and beyond
Andres Manuel Vargas-Beltran, Stuart Javier Mialma-Omana, Diego Omar Vivanco-Tellez
Andres Manuel Vargas-Beltran, Department of Hepatology, General Hospital Dr. Manuel Gea Gonzalez, Mexico City 14080, Ciudad de México, Mexico
Andres Manuel Vargas-Beltran, Stuart Javier Mialma-Omana, Diego Omar Vivanco-Tellez, Faculty of Medicine, Meritorious Autonomous University of Puebla, Puebla 72420, Puebla, Mexico
Stuart Javier Mialma-Omana, Department of Surgery, National Institute of Medical Sciences and Nutrition Salvador Zubiran, Mexico City 14080, Ciudad de México, Mexico
Author contributions: Vargas-Beltran AM, Mialma-Omana SJ, and Vivanco-Tellez DO wrote the manuscript and prepared the figures; Vargas-Beltran AM revised and polished the manuscript as a co-corresponding author and was responsible for the submission of the current version of the manuscript; All authors read and approved the final manuscript.
Conflict-of-interest statement: All authors have no conflicts of interest to declare for this article.
Open Access: This article is an open-access article that was selected by an in-house editor and fully peer-reviewed by external reviewers. It is distributed in accordance with the Creative Commons Attribution NonCommercial (CC BY-NC 4.0) license, which permits others to distribute, remix, adapt, build upon this work non-commercially, and license their derivative works on different terms, provided the original work is properly cited and the use is non-commercial. See: https://creativecommons.org/Licenses/by-nc/4.0/
Corresponding author: Andres Manuel Vargas-Beltran, MD, Department of Hepatology, General Hospital Dr. Manuel Gea Gonzalez, Calz. de Tlalpan 4800, Belisario Domínguez Secc 16, Mexico City 14080, Ciudad de México, Mexico. andresman.vargas@gmail.com
Received: June 4, 2025
Revised: July 4, 2025
Accepted: September 28, 2025
Published online: December 5, 2025
Processing time: 184 Days and 19.5 Hours
Abstract

The gut microbiota plays a pivotal role in the pathogenesis of liver diseases, particularly hepatic encephalopathy (HE), in which dysbiosis contributes to ammonia production, systemic inflammation, and neurocognitive dysfunction. Emerging evidence suggests that targeting the gut-liver axis through pharmacological and microbiota-based interventions can mitigate liver disease progression and HE severity. This review explored the latest therapeutic strategies aimed at modulating gut microbiota in liver disease, focusing on traditional approaches such as non-absorbable disaccharides (lactulose, lactitol), antibiotics (rifaximin), and probiotics as well as novel interventions, including postbiotics, synbiotics, and fecal microbiota transplantation. Additionally, bile acid modulators, short-chain fatty acid derivatives, and microbiome-targeted small molecules are being investigated for their potential to restore gut-liver homeostasis. We also discussed the implications of gut microbiota modulation in conditions beyond HE, such as metabolic dysfunction-associated steatotic liver disease and cirrhosis. By integrating gut microbiota-targeted therapies into liver disease management, we may develop more effective, personalized approaches to improve patient outcomes and reduce complications.

Keywords: Gut microbiota; Hepatic encephalopathy; Gut-liver axis; Probiotics; Fecal microbiota transplantation; Cirrhosis; Fatty liver

Core Tip: The gut microbiota is a key player in the progression of liver diseases, especially hepatic encephalopathy, by influencing ammonia levels, inflammation, and neurocognitive function. This review discussed current and emerging therapies that target the gut-liver axis, including non-absorbable disaccharides, antibiotics, probiotics, synbiotics, postbiotics, and fecal microbiota transplantation. Novel agents such as bile acid modulators and microbiome-targeted molecules were also explored. Modulating gut microbiota may not only alleviate hepatic encephalopathy but also benefit conditions like metabolic dysfunction-associated steatotic liver disease and cirrhosis, facilitating the way for more personalized and effective liver disease management strategies.