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Jin S, Qin D, Wang C, Liang B, Zhang L, Gao W, Wang X, Jiang B, Rao B, Shi H, Liu L, Lu Q. Development, validation, and clinical utility of risk prediction models for cancer-associated venous thromboembolism: A retrospective and prospective cohort study. Asia Pac J Oncol Nurs 2025; 12:100691. [PMID: 40291141 PMCID: PMC12032184 DOI: 10.1016/j.apjon.2025.100691] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/18/2024] [Accepted: 03/17/2025] [Indexed: 04/30/2025] Open
Abstract
Objectives This study aims to develop cancer-associated venous thromboembolism (CA-VTE) risk prediction models using survival machine learning (ML) algorithms. Methods This study employed a double-cohort study design (retrospective and prospective). The retrospective cohort (n = 1036) was used as training set (70.0%, n = 725) and internal validation set (30.0%, n = 311); while the prospective cohort (n = 321) was used as external validation set. Seven survival ML algorithms, including COX regression, classification, regression and survival tree, random survival forest, gradient boosting survival machine tree, extreme gradient boosting survival tree, survival support vector analysis, and survival artificial neural network, were applied to train CA-VTE models. Results Univariate analysis and LASSO-COX regression both selected five predictors: age, previous VTE history, ICU/CCU, CCI, and D-dimer. The seven survival ML models (C-index: 0.709-0.760; Brier Score: 0.212-0.243) all outperformed Khorana Score (C-index: 0.632; Brier Score: 0.260) in external validation set. Among all models, the COX_DD model (COX regression + D-dimer) performed best. However, ML models and Khorana Score predicted CA-VTE risk on ≥ 7 days of hospitalization with an increase in Brier Score ≥ 0.25, showing poor calibration. Conclusions In this study, the CA-VTE risk prediction models developed in seven survival ML algorithms outperformed Khorana Score. Combining with D-dimer can improve model performance. Applying the nomogram based on the optimal COX_DD model allows oncology nurse to reassess CA-VTE risk once a week. The prediction models developed using survival ML algorithms in this study may contribute to the dynamic and accurate risk assessment of CA-VTE for cancer survivors.
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Affiliation(s)
- Shuai Jin
- Department of Adult Care, School of Nursing, Capital Medical University, Beijing, China
| | - Dan Qin
- Division of Medical & Surgical Nursing, School of Nursing, Peking University, Beijing, China
| | - Chong Wang
- Department of Gastrointestinal Oncology Surgery, Beijing Shijitan Hospital, Capital Medical University, Beijing, China
| | - Baosheng Liang
- Department of Biostatistics, School of Public Health, Peking University, Beijing, China
| | - Lichuan Zhang
- Division of Medical & Surgical Nursing, School of Nursing, Peking University, Beijing, China
| | - Weiyin Gao
- Operating Room, Second Hospital of Shanxi Medical University, Taiyuan, Shanxi, China
| | - Xiao Wang
- Division of Medical & Surgical Nursing, School of Nursing, Peking University, Beijing, China
| | - Bo Jiang
- Department of Medical Oncology, Beijing Tiantan Hospital, Capital Medical University, Beijing, China
| | - Benqiang Rao
- Department of Gastrointestinal Surgery, Beijing Shijitan Hospital, Capital Medical University, Beijing, China
| | - Hanping Shi
- Department of Gastrointestinal Surgery, Beijing Shijitan Hospital, Capital Medical University, Beijing, China
| | - Lihui Liu
- Department of Nursing, Beijing Shijitan Hospital, Capital Medical University, Beijing, China
| | - Qian Lu
- Division of Medical & Surgical Nursing, School of Nursing, Peking University, Beijing, China
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Wang Y, Zhao Q, Zheng X, Zhang K. Association between renal function and memory-related disease: evidence from the China Health and Retirement Longitudinal Study. Ren Fail 2025; 47:2473668. [PMID: 40038268 PMCID: PMC11884092 DOI: 10.1080/0886022x.2025.2473668] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/18/2024] [Revised: 02/21/2025] [Accepted: 02/22/2025] [Indexed: 03/06/2025] Open
Abstract
BACKGROUND Previous studies have reported that renal function is associated brain structure and cognitive dysfunction. However, the association between renal function and memory-related disease was not well characterized. METHODS Altogether, 5,282 individuals were included in this study based on China Longitudinal Study of Health and Retirement. Four estimated glomerular filtration rate indicators (eGFR), including CG, CKD-EPIscr, CKD-EPIscr-cys, and CKD-EPIcys were used to evaluate the association between renal function and memory-related disease. RESULTS The multivariable-adjusted HRs (95% CIs) of the memory-related disease in the low eGFR group (eGFR < 90 mL/min/1.73m2) were 1.56 (1.13-2.16) for CG, 1.56 (1.19-2.06) for CKD-EPIscr, 1.45 (1.06-1.99) for CKD-EPIscr-cys and 1.27 (0.91-1.77) for CKD-EPIcys, respectively. Similarly, each SD increase of eGFR was associated with reduced risk of memory-related disease on continuous analyses. Subgroup analyses further confirmed these associations. Moreover, the addition of eGFR to conventional risk factors improved the predictive power for memory-related disease (net reclassification improvement: 13.90% for CG, 19.83% for CKD-EPIscr and 30.65% for CKD-EPIscr-cys). CONCLUSIONS In conclusion, impaired renal function was associated with the increasing risk of memory-related disease, indicating that renal function may be a potential indicator for memory-related disease. Further studies from other races and populations are needed to replicate our findings and to clarify the potential mechanisms.
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Affiliation(s)
- Yu Wang
- Department of Tuberculosis Control and Prevention, Suzou Center for Disease Control and Prevention, Suzhou, Jiangsu, China
| | - Qian Zhao
- Department of Preventive Medicine, School of Public Health, Suzhou Vocational Health College, Suzhou, Jiangsu, China
| | - Xiaowei Zheng
- Public Health Research Center and Department of Public Health and Preventive Medicine, Wuxi School of Medicine, Jiangnan University, Wuxi, Jiangsu, China
| | - Kaixin Zhang
- Department of Clinical Research Center, Wuxi No.2 People’s Hospital (Jiangnan University Medical Center), Wuxi, Jiangsu, China
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Laribi H, Raymond N, Taseen R, Poenaru D, Vallières M. Leveraging patients' longitudinal data to improve the Hospital One-year Mortality Risk. Health Inf Sci Syst 2025; 13:23. [PMID: 40051409 PMCID: PMC11880507 DOI: 10.1007/s13755-024-00332-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/18/2024] [Accepted: 12/18/2024] [Indexed: 03/09/2025] Open
Abstract
Purpose Predicting medium-term survival after admission is necessary for identifying end-of-life patients who may benefit from goals of care (GOC) discussions. Considering that several patients have multiple hospital admissions, this study leverages patients' longitudinal data and information collected routinely at admission to predict the Hospital One-year Mortality Risk. Methods We propose the Ensemble Longitudinal Network (ELN) to predict one-year mortality using patients' longitudinal records. The model was evaluated: (i) with only predictors reported upon admission (AdmDemo); and (ii) also with diagnoses available later during patients' stay (AdmDemoDx). Using records of 123,646 patients with 250,812 hospitalizations from 2011 to 2021, our dataset was split into a learning set (2011-2017) to compare models with and without longitudinal information using nested cross-validation, and a holdout set (2017-2021) to assess clinical utility towards GOC discussions. Results The ELN achieved a significant increase in predictive performance using longitudinal information (p-value < 0.05) for both the AdmDemo and AdmDemoDx predictors. For randomly selected hospitalizations in the holdout set, the ELN showed: (i) AUROCs of 0.83 (AdmDemo) and 0.87 (AdmDemoDx); and (ii) superior decision-making properties, notably with an increase in precision from 0.25 for the standard process to 0.28 (AdmDemo) and 0.36 (AdmDemoDx). Feature importance analysis confirmed that the utility of the longitudinal information increases with the number of patient hospitalizations. Conclusion Integrating patients' longitudinal data provides better insights into the severity of illness and the overall patient condition, in particular when limited information is available during their stay.
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Affiliation(s)
- Hakima Laribi
- Department of Computer Science, Université de Sherbrooke, Sherbrooke, Canada
| | - Nicolas Raymond
- Department of Computer Science, Université de Sherbrooke, Sherbrooke, Canada
| | - Ryeyan Taseen
- Department of Medicine, Cambridge Memorial Hospital, Cambridge, Canada
| | - Dan Poenaru
- Department of Pediatric Surgery, McGill University Health Centre, Montreal, Canada
- Centre for Outcomes Research and Evaluation (CORE), Research Institute of the McGill University Health Centre, Montreal, Canada
| | - Martin Vallières
- Department of Computer Science, Université de Sherbrooke, Sherbrooke, Canada
- Centre de recherche du Centre hospitalier universitaire de Sherbrooke, Sherbrooke, Canada
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Hassanzadeh A, Allahdadi M, Nayebirad S, Namazi N, Nasli-Esfahani E. Implementing novel complete blood count-derived inflammatory indices in the diabetic kidney diseases diagnostic models. J Diabetes Metab Disord 2025; 24:44. [PMID: 39801691 PMCID: PMC11723874 DOI: 10.1007/s40200-024-01523-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 07/23/2024] [Accepted: 10/12/2024] [Indexed: 01/16/2025]
Abstract
Objectives Hemogram inflammatory markers, including neutrophil-to-lymphocyte ratio (NLR), platelet-to-lymphocyte ratio (PLR), red-cell distribution width (RDW), and mean platelet volume (MPV) have been associated with type 2 diabetes mellitus (T2DM) and its complications, namely diabetic kidney diseases (DKD). We aimed to develop and validate logistic regression (LR) and CatBoost diagnostic models and study the role of adding these markers to the models. Methods All individuals who were managed in our secondary care center from March 2020 to December 2023 were identified. After excluding the ineligible patients, train-test splitting, and data preprocessing, two baseline LR and CatBoost-based models were developed using demographic, clinical, and laboratory features. The AUC-ROC of the models with biomarkers (NLR, PLR, RDW, and MPV) was compared to the baseline models. We calculated net reclassification improvement (NRI) and integrated discrimination index (IDI). Results One thousand and eleven T2DM patients were eligible. The AUC-ROC of both LR (0.738) and CatBoost (0.715) models was comparable. Adding target inflammatory markers did not significantly change the AUC-ROC in both LR and CatBoost models. Adding RDW to the baseline LR model reclassified 41.7% of patients without DKD, in the cost of misclassification of 38.4% of DKD cases. This change was absent in CatBoost models, and other markers did not achieve improved NRI or IDI. Conclusion The basic models with demographical and clinical features had acceptable performance. Adding RDW to the basic LR model improved the reclassification of the non-DKD participants. However, adding other hematological indices did not significantly improve the LR and CatBoost models' performance. Supplementary Information The online version contains supplementary material available at 10.1007/s40200-024-01523-2.
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Affiliation(s)
- Ali Hassanzadeh
- Diabetes Research Center, Endocrinology and Metabolism Clinical Sciences Institute, Tehran University of Medical Sciences, Shahrivar Alley, Kargar St., Tehran, 1411713119 Iran
| | - Mehdi Allahdadi
- Faculty of Medicine, Tehran University of Medical Sciences, Tehran, Iran
| | - Sepehr Nayebirad
- Tehran Heart Center, Cardiovascular Diseases Research Institute, Tehran University of Medical Sciences, Tehran, Iran
| | - Nazli Namazi
- Diabetes Research Center, Endocrinology and Metabolism Clinical Sciences Institute, Tehran University of Medical Sciences, Shahrivar Alley, Kargar St., Tehran, 1411713119 Iran
| | - Ensieh Nasli-Esfahani
- Diabetes Research Center, Endocrinology and Metabolism Clinical Sciences Institute, Tehran University of Medical Sciences, Shahrivar Alley, Kargar St., Tehran, 1411713119 Iran
- Endocrinology and Metabolism Research Center, Endocrinology and Metabolism Clinical Sciences Institute, Tehran University of Medical Sciences, Tehran, Iran
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Wen J, Tu J, Tao X, Tang Y, Yang Z, Pan Z, Luo Y, Xiang C, Tang D, Huang L, Xia L. Cardiac magnetic resonance left atrioventricular coupling index as a prognostic tool in hypertrophic cardiomyopathy. ESC Heart Fail 2025; 12:2177-2189. [PMID: 39905775 PMCID: PMC12055398 DOI: 10.1002/ehf2.15237] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/16/2024] [Revised: 01/16/2025] [Accepted: 01/20/2025] [Indexed: 02/06/2025] Open
Abstract
AIMS A novel marker left atrioventricular coupling index (LACI) has been proved to be associated with cardiovascular events in patients without history of cardiovascular disease. However, the studies on cardiac magnetic resonance-derived LACI in hypertrophic cardiomyopathy (HCM) patients are limited, and the prognostic value of LACI has still not been studied thoroughly, so we aimed to explore the association between LACI and adverse clinical outcomes in HCM patients. METHODS A total of 206 HCM patients underwent cardiac magnetic resonance examination were retrospectively enrolled. LACI is defined by the ratio between the left atrial (LA) volume and the left ventricular (LV) volume in LV end-diastolic phase. The composite endpoint was categorized into death-related, heart failure-related, and arrhythmia-related events, reflecting mortality risk, heart failure progression, and arrhythmia burden, respectively. Receiver operating characteristics curve analysis was used to determine the optimal cut-off value for LACI to distinguish HCM patients at high risk of adverse clinical outcome. Multivariable Cox regression models were built including significant clinical variables, LA ejection fraction (LAEF), LA volume index (LAVI), late gadolinium enhancement (LGE) extent and LACI. The improvement of discrimination by adding LACI to a clinical model was assessed using C-statistic, net reclassification improvement (NRI) and integrated discrimination improvement (IDI). RESULTS Thirty-four HCM patients reached the endpoint during a median follow-up time of 60 [interquartile range (50-68)] months. In the multivariate Cox regression analysis, LACI [hazard ratio 1.054, 95% confidence interval (CI): 1.037, 1.071; P < 0.001] was an independent predictor of the composite events after adjustment for age and atrial fibrillation. Then 40.09% was identified as an optimal cut-off for LACI in the risk stratification. Integrating LACI to the clinical model yielded higher C-statistic 0.892 with 95% CI (0.861, 0.922) compared with LA diameter, LAEF, LAVI and LGE extent, providing an improvement in prediction of high-risk patients (NRI = 0.627, 95% CI: 0.112-0.934; IDI = 0.295, 95% CI: 0.016-0.709). CONCLUSIONS LACI is an independent risk factor for clinical adverse outcome and is superior to conventional LA parameters and LGE extent for the identification of high-risk HCM patients.
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Affiliation(s)
- Jinyang Wen
- Department of Radiology, Tongji Hospital, Tongji Medical CollegeHuazhong University of Science and TechnologyWuhanChina
| | - Junhao Tu
- Department of Otorhinolaryngology, Head and Neck Surgery, The First Affiliated Hospital, Jiangxi Medical CollegeNanchang UniversityNanchangChina
| | | | - Yuanyuan Tang
- Department of Radiology, Tongji Hospital, Tongji Medical CollegeHuazhong University of Science and TechnologyWuhanChina
| | - Zhaoxia Yang
- Department of Radiology, Tongji Hospital, Tongji Medical CollegeHuazhong University of Science and TechnologyWuhanChina
| | - Ziyi Pan
- Department of Radiology, Tongji Hospital, Tongji Medical CollegeHuazhong University of Science and TechnologyWuhanChina
| | - Yi Luo
- Department of Radiology, Tongji Hospital, Tongji Medical CollegeHuazhong University of Science and TechnologyWuhanChina
| | - Chunlin Xiang
- Department of Radiology, Tongji Hospital, Tongji Medical CollegeHuazhong University of Science and TechnologyWuhanChina
| | - Dazhong Tang
- Department of Radiology, Tongji Hospital, Tongji Medical CollegeHuazhong University of Science and TechnologyWuhanChina
| | - Lu Huang
- Department of Radiology, Tongji Hospital, Tongji Medical CollegeHuazhong University of Science and TechnologyWuhanChina
| | - Liming Xia
- Department of Radiology, Tongji Hospital, Tongji Medical CollegeHuazhong University of Science and TechnologyWuhanChina
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Nishimura H, Ishii J, Takahashi H, Ishihara Y, Nakamura K, Kitagawa F, Sakaguchi E, Sasaki Y, Kawai H, Muramatsu T, Harada M, Yamada A, Tanizawa-Motoyama S, Naruse H, Sarai M, Yanase M, Ishii H, Watanabe E, Ozaki Y, Izawa H. Prognostic value of combining cardiac myosin-binding protein C and N-terminal pro-B-type natriuretic peptide in patients without acute coronary syndrome treated at medical cardiac intensive care units. Heart Vessels 2025; 40:531-544. [PMID: 39630269 DOI: 10.1007/s00380-024-02492-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 07/28/2024] [Accepted: 11/20/2024] [Indexed: 01/06/2025]
Abstract
We investigated the prognostic value of cardiac myosin-binding protein C (cMyC), a novel cardiospecific marker, both independently and in combination with N-terminal pro-B-type natriuretic peptide (NT-proBNP), for predicting 6-month all-cause mortality in patients without acute coronary syndrome (ACS) treated at medical (nonsurgical) cardiac intensive care units (CICUs). Admission levels of cMyC, high-sensitivity cardiac troponin T (hs-cTnT), and NT-proBNP were measured in 1032 consecutive patients (mean age; 70 years) without ACS hospitalized acutely in medical CICUs for the treatment of cardiovascular disease. Serum cMyC was closely correlated with hs-cTnT and moderately with NT-proBNP (r = 0.92 and r = 0.49, respectively, p < 0.0001). During the 6-month follow-up period after admission, there were 109 (10.6%) all-cause deaths, including 72 cardiovascular deaths. Both cMyC and NT-proBNP were independent predictors of 6-month all-cause mortality (all p < 0.05). Combining cMyC and NT-proBNP with a baseline model of established risk factors improved patient classification and discrimination beyond any single biomarker (all p < 0.05) or the baseline model alone (both p < 0.0001). Moreover, patients were divided into nine groups using cMyC and NT-proBNP tertiles, and the adjusted hazard ratio (95% confidence interval) for 6-month all-cause mortality in patients with both biomarkers in the highest vs. lowest tertile was 9.67 (2.65-35.2). When cMyC was replaced with hs-cTnT, similar results were observed for hs-cTnT. In addition, the C-indices for addition of cMyC or hs-cTnT to the baseline model were similar (0.798 vs. 0.800, p = 0.94). In conclusion, similar to hs-cTnT, cMyC at admission may be a potent, independent predictor of 6-month all-cause mortality in patients without ACS treated at medical CICUs, and their prognostic abilities may be comparable. Combining cMyC or hs-cTnT with NT-proBNP may substantially improve early risk stratification of this population.
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Affiliation(s)
- Hideto Nishimura
- Department of Cardiology, Fujita Health University School of Medicine, 1-98 Kutsukake-cho, Dengakugakubo, Toyoake, 470-1192, Japan
| | - Junnichi Ishii
- Department of Cardiology, Fujita Health University School of Medicine, 1-98 Kutsukake-cho, Dengakugakubo, Toyoake, 470-1192, Japan.
- Toyota Autobody Yoshiwara Clinic, 25 Kamifujiike, Yoshiwara-cho, Toyota, 473-8517, Japan.
| | - Hiroshi Takahashi
- Department of Cardiology, Fujita Health University School of Medicine, 1-98 Kutsukake-cho, Dengakugakubo, Toyoake, 470-1192, Japan
| | - Yuya Ishihara
- Department of Laboratory of Clinical Medicine, Fujita Health University Hospital, Toyoake, Japan
| | - Kazuhiro Nakamura
- Department of Laboratory of Clinical Medicine, Fujita Health University Hospital, Toyoake, Japan
| | - Fumihiko Kitagawa
- Department of Laboratory of Clinical Medicine, Fujita Health University Hospital, Toyoake, Japan
| | - Eirin Sakaguchi
- Faculty of Medical Technology, School of Health Sciences, Fujita Health University, Toyoake, Japan
| | - Yuko Sasaki
- Sysmex R&D Center Europe GmbH, Hamburg, Germany
| | - Hideki Kawai
- Department of Cardiology, Fujita Health University School of Medicine, 1-98 Kutsukake-cho, Dengakugakubo, Toyoake, 470-1192, Japan
| | - Takashi Muramatsu
- Department of Cardiology, Fujita Health University School of Medicine, 1-98 Kutsukake-cho, Dengakugakubo, Toyoake, 470-1192, Japan
| | - Masahide Harada
- Department of Cardiology, Fujita Health University School of Medicine, 1-98 Kutsukake-cho, Dengakugakubo, Toyoake, 470-1192, Japan
| | - Akira Yamada
- Department of Cardiology, Fujita Health University School of Medicine, 1-98 Kutsukake-cho, Dengakugakubo, Toyoake, 470-1192, Japan
| | - Sadako Tanizawa-Motoyama
- Department of Cardiology, Fujita Health University School of Medicine, 1-98 Kutsukake-cho, Dengakugakubo, Toyoake, 470-1192, Japan
| | - Hiroyuki Naruse
- Faculty of Medical Technology, School of Health Sciences, Fujita Health University, Toyoake, Japan
| | - Masayoshi Sarai
- Department of Cardiology, Fujita Health University School of Medicine, 1-98 Kutsukake-cho, Dengakugakubo, Toyoake, 470-1192, Japan
| | - Masanobu Yanase
- Department of Cardiology, Fujita Health University School of Medicine, 1-98 Kutsukake-cho, Dengakugakubo, Toyoake, 470-1192, Japan
| | - Hideki Ishii
- Department of Cardiovascular Medicine, Gunma University Graduate School of Medicine, Maebashi, Japan
| | - Eiichi Watanabe
- Department of Cardiology, Fujita Health University School of Medicine, 1-98 Kutsukake-cho, Dengakugakubo, Toyoake, 470-1192, Japan
| | - Yukio Ozaki
- Department of Cardiology, Fujita Health University School of Medicine, 1-98 Kutsukake-cho, Dengakugakubo, Toyoake, 470-1192, Japan
| | - Hideo Izawa
- Department of Cardiology, Fujita Health University School of Medicine, 1-98 Kutsukake-cho, Dengakugakubo, Toyoake, 470-1192, Japan
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Di Angelantonio E, Pennells L, Abdelhamid M, Aboyans V, Asteggiano R, Čelutkienė J, Grobbee DE, Iung B, Jüni P, McEvoy JW, Rakisheva A, Rossello X, Visseren FLJ, Baigent C, Prescott EB. 2024 Revision of the level of evidence grading system for ESC clinical practice guideline recommendations II: diagnostic tests and prediction models. Eur Heart J 2025; 46:1895-1906. [PMID: 40116738 DOI: 10.1093/eurheartj/ehaf016] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 09/12/2024] [Revised: 11/20/2024] [Accepted: 01/08/2025] [Indexed: 03/23/2025] Open
Abstract
The level of evidence (LOE) grading system for European Society of Cardiology (ESC) Clinical Practice Guidelines (CPG) classifies the quality of the evidence supporting a recommendation. However, the current taxonomy does not fully consider the optimal study design necessary to establish evidence for different types of recommendations in ESC guidelines. Therefore, two separate task forces of clinical and methodological experts were appointed by the CPG Committee, with the first tasked with updating the LOE grading system for therapy and prevention and the second responsible for developing a LOE grading system for diagnosis and prediction. This report from the second of these Task Forces develops a new system for diagnostic tests and prediction models which maintains the three-level grading structure to classify the quality of the evidence but introduces new definitions specific for diagnosis and prediction. For diagnostic tests, LOE A represents conclusive evidence of adequate diagnostic ability from at least two high-quality studies. Level of evidence B represents suggestive evidence from one high-quality or at least two moderate-quality studies. Level of evidence C represents preliminary evidence not classified as A or B, including evidence from less than two moderate-quality studies, or from expert consensus. For prediction models, LOE A represents conclusive evidence of adequate predictive ability from at least one high-quality derivation and two or more external validation studies of at least moderate quality. Level of evidence B represents suggestive evidence in one or more derivation studies and one or more external validation studies of at least moderate quality. Level of evidence C represents preliminary evidence not classified as A or B, including evidence from a derivation study of at least moderate quality, but with low quality or no external validation, or a derivation study of low quality.
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Affiliation(s)
- Emanuele Di Angelantonio
- British Heart Foundation Cardiovascular Epidemiology Unit, Department of Public Health and Primary Care, University of Cambridge, Papworth Road, Cambridge Biomedical Campus, Cambridge CB2 0BB, UK
- Victor Phillip Dahdaleh Heart and Lung Research Institute, University of Cambridge, Papworth Road, Cambridge Biomedical Campus, Cambridge CB2 0BB, UK
- NIHR Blood and Transplant Research Unit in Donor Health and Behaviour, University of Cambridge, Cambridge, UK
- BHF Centre of Research Excellence, School of Clinical Medicine, University of Cambridge, Addenbrooke's Hospital, Cambridge, UK
- Health Data Research UK Cambridge, Wellcome Genome Campus and University of Cambridge, Cambridge, UK
- Health Data Science Centre, Human Technopole, V.le Rita Levi-Montalcini 1, 20157 Milan, Italy
| | - Lisa Pennells
- British Heart Foundation Cardiovascular Epidemiology Unit, Department of Public Health and Primary Care, University of Cambridge, Papworth Road, Cambridge Biomedical Campus, Cambridge CB2 0BB, UK
- Victor Phillip Dahdaleh Heart and Lung Research Institute, University of Cambridge, Papworth Road, Cambridge Biomedical Campus, Cambridge CB2 0BB, UK
| | - Magdy Abdelhamid
- Department of Cardiovascular Medicine at the Faculty of Medicine, Kasr El Ainy, Cairo University, Cairo, Egypt
| | - Victor Aboyans
- Department of Cardiology at the Dupuytren University Hospital, Limoges, France
| | - Riccardo Asteggiano
- Faculty of Medicine, Insubria University, Varese, and Laboratorio Analisi e Ricerca Clinica, Turin, Italy
| | - Jelena Čelutkienė
- Clinic of Cardiac and Vascular Diseases, Vilnius University, Vilnius, Lithuania
| | - Diederick E Grobbee
- University Medical Center Utrecht, Utrecht University, Utrecht, Netherlands
- The Julius Center for Health Sciences and Primary Care, Utrecht, Netherlands
| | - Bernard Iung
- Hospital Bichat-Claude Bernard, Université de Paris, Paris, France
| | - Peter Jüni
- Clinical Trial Service Unit and Epidemiological Studies Unit, Nuffield Department of Population Health, University of Oxford, Oxford, UK
| | - John William McEvoy
- Department of Cardiology, University of Galway, School of Medicine, Galway, Ireland
- National Institute for Prevention and Cardiovascular Health, Galway, Ireland
| | - Amina Rakisheva
- Cardiology Department, City Cardiology Center, Almaty, Kazakhstan
| | - Xavier Rossello
- Cardiology Department, Hospital Universitari Son Espases, Health Research Institute of the Balearic Islands (IdiSBa), Palma de Mallorca, Spain
- Facultad de Medicina, Universitat Illes Balears (UIB), Palma de Mallorca, Spain
| | - Frank L J Visseren
- Department of Vascular Medicine, University Medical Center Utrecht, Utrecht, Netherlands
| | - Colin Baigent
- Clinical Trial Service Unit and Epidemiological Studies Unit, Nuffield Department of Population Health, University of Oxford, Oxford, UK
| | - Eva B Prescott
- Department of Cardiology, Bispebjerg University Hospital, Copenhagen, Denmark
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8
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Qiu X, Han Y, Cao C, Liao Y, Hu H. Association between atherogenicity indices and prediabetes: a 5-year retrospective cohort study in a general Chinese physical examination population. Cardiovasc Diabetol 2025; 24:220. [PMID: 40399916 PMCID: PMC12096774 DOI: 10.1186/s12933-025-02768-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 01/29/2025] [Accepted: 05/01/2025] [Indexed: 05/23/2025] Open
Abstract
BACKGROUND AND OBJECTIVE Atherogenicity indices have emerged as promising markers for cardiometabolic disorders, yet their relationship with prediabetes risk remains unclear. This study aimed to comprehensively evaluate the associations between six atherogenicity indices and prediabetes risk in a Chinese population, and explore the predictive value of these atherosclerotic parameters for prediabetes. METHODS This retrospective cohort study included 97,151 participants from 32 healthcare centers across China, with a median follow-up of 2.99 (2.13, 3.95) years. Six atherogenicity indices were calculated: Castelli's Risk Index-I (CRI-I), Castelli's Risk Index-II (CRI-II), Atherogenic Index of Plasma (AIP), Atherogenic Index (AI), Lipoprotein Combine Index (LCI), and Cholesterol Index (CHOLINDEX). To address the natural relationships between the atherogenicity indices and risk of prediabetes, we applied Cox proportional hazards regression with cubic spline functions and smooth curve fitting, using a recursive algorithm to calculate inflection points. Machine learning approach (XGBoost and Boruta methods) to address the high collinearity among indices and assess their relative importance, combined with time-dependent ROC analysis to evaluate the predictive performance at 3-, 4-, and 5-year follow-up. RESULTS During follow-up, 11,199 participants developed prediabetes (incidence rate: 3.71 per 100 person-years). Significant nonlinear associations were observed between all atherogenicity indices and prediabetes risk. Through Z-score standardization of atherogenicity indices and comprehensive Cox proportional hazards regression and advanced machine learning techniques, we identified AIP as the most significant predictor of prediabetes [HR = 1.057 (95% CI 1.035-1.080, P < 0.0001)], with LCI emerging as a secondary important marker [HR = 1.020 (95% CI 1.002-1.038, P = 0.0267)]. Our innovative XGBoost and Boruta analysis uniquely validated these findings, providing robust evidence of AIP and LCI's critical role in prediabetes risk assessment. Time-dependent ROC analysis further validated these findings, with LCI and AIP demonstrating comparable discrimination, with overlapping AUC ranges of 0.5952-0.6082. Notably, the combined indices model achieved enhanced predictive performance (AUC: 0.6753) compared to individual indices, suggesting the potential benefit of using multiple atherogenicity indices for prediabetes risk prediction. CONCLUSION This study identifies statistically significant associations between atherogenicity indices and prediabetes risk, highlighting their nonlinear relationships and combined effects. While the predictive performance of these indices is modest (AUC 0.55-0.68), these findings may contribute to improved risk stratification when incorporated into comprehensive assessment strategies.
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Affiliation(s)
- Xianli Qiu
- Fuwei Community Health Service Station, Shenzhen Baoan District Fuyong People's Hospital, Shenzhen, 518000, Guangdong, China
| | - Yong Han
- Department of Emergency, Shenzhen Second People's Hospital, Shenzhen, 518000, Guangdong, China
- Department of Emergency, The First Affiliated Hospital of Shenzhen University, Shenzhen, 518000, Guangdong, China
| | - Changchun Cao
- Department of Rehabilitation, Longgang E.N.T Hospital & Shenzhen Key Laboratory of E.N.T, Institute of Ear Nose Throat (E.N.T), Shenzhen, 518000, Guangdong, China
| | - Yuheng Liao
- Department of Nephrology, Shenzhen Second People's Hospital, No.3002 Sungang Road, Futian, Shenzhen, 518000, Guangdong, China
- Department of Nephrology, The First Affiliated Hospital of Shenzhen University, Shenzhen, 518000, Guangdong, China
- Department of Nephrology, Shenzhen University Health Science Center, Shenzhen, 518000, Guangdong, China
| | - Haofei Hu
- Department of Nephrology, Shenzhen Second People's Hospital, No.3002 Sungang Road, Futian, Shenzhen, 518000, Guangdong, China.
- Department of Nephrology, The First Affiliated Hospital of Shenzhen University, Shenzhen, 518000, Guangdong, China.
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Luchsinger JA, Teresi JA, Valdez L, Rosario D, de Miguel M, Taylor D, Singer J, Chang N, Fuller WS, Boquín C, Silver S, Eimicke JP, Kong J, Goldberg TE, Devanand DP. Performance of a smell identification test versus the Mini-Mental Status Exam for the detection of dementia and cognitive impairment among persons with cognitive concerns in primary care. J Alzheimers Dis 2025:13872877251345083. [PMID: 40397401 DOI: 10.1177/13872877251345083] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/22/2025]
Abstract
BackgroundOdor identification deficits predict Alzheimer's disease (AD) in epidemiological studies.ObjectiveTo compare the accuracy of a short odor identification test with a short cognitive screening test for the detection of dementia and cognitive impairment in elderly persons with cognitive concerns.MethodsThis was a cross-sectional study of 600 participants 65 years and older, without known mild cognitive impairment (MCI) or dementia, with cognitive concerns, attending primary care practices in New York City. The odor identification test was the Brief Smell Identification Test (BSIT). The comparator test was the Mini Mental Status Exam II (MMSE). Cognitive diagnoses were made using the National Alzheimer's Coordinating Center Uniform Data set (NACC-UDS) version 3 forms with slight modifications. Test performance was compared using Receiver Operating Characteristic analyses.ResultsThe mean age was 72.65 ± 6.31 years, 73.3% were female, 63.3% were Hispanic, 13.5% non-Hispanic Black, and 20.8% non-Hispanic White; 23.5% were classified as normal cognition, 27.7% as cognitive impairment-not mild cognitive impairment (MCI), 31.2% as amnestic MCI, 5.7% as non-amnestic MCI, and 12% as dementia. The MMSE was superior to the BSIT in detecting dementia and any cognitive impairment. Combining abnormal scores in the BSIT (≤8) to MMSE (≤24) improved the MMSE's specificity and positive predictive value (PPV) in detecting cognitive impairment.ConclusionsThe MMSE was superior to the BSIT in detecting dementia and cognitive impairment in primary care but using both tests improved specificity and PPV for identifying persons with subjective complaints needing further cognitive and biomarker evaluation.
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Affiliation(s)
- José A Luchsinger
- Department of Medicine, College of Physicians and Surgeons, Columbia University Irving Medical Center, New York, NY, USA
- Department of Epidemiology, Joseph P. Mailman School of Public Health, CUIMC, New York, NY, USA
| | - Jeanne A Teresi
- Department of Medicine, College of Physicians and Surgeons, Columbia University Irving Medical Center, New York, NY, USA
- Columbia University Stroud Center at the New York State Psychiatric Institute, New York, NY, USA
| | - Lenfis Valdez
- Department of Medicine, College of Physicians and Surgeons, Columbia University Irving Medical Center, New York, NY, USA
| | - Dahiana Rosario
- Department of Medicine, College of Physicians and Surgeons, Columbia University Irving Medical Center, New York, NY, USA
| | - Maria de Miguel
- Department of Medicine, College of Physicians and Surgeons, Columbia University Irving Medical Center, New York, NY, USA
- Ambulatory Care Network, New York Presbyterian Hospital, New York, NY, USA
| | - Delphine Taylor
- Department of Medicine, College of Physicians and Surgeons, Columbia University Irving Medical Center, New York, NY, USA
- Ambulatory Care Network, New York Presbyterian Hospital, New York, NY, USA
| | - Jessica Singer
- Department of Medicine, College of Physicians and Surgeons, Columbia University Irving Medical Center, New York, NY, USA
- Ambulatory Care Network, New York Presbyterian Hospital, New York, NY, USA
| | - Nancy Chang
- Department of Medicine, College of Physicians and Surgeons, Columbia University Irving Medical Center, New York, NY, USA
- Ambulatory Care Network, New York Presbyterian Hospital, New York, NY, USA
| | - William S Fuller
- Department of Medicine, College of Physicians and Surgeons, Columbia University Irving Medical Center, New York, NY, USA
- Ambulatory Care Network, New York Presbyterian Hospital, New York, NY, USA
| | - Cyrus Boquín
- Department of Medicine, College of Physicians and Surgeons, Columbia University Irving Medical Center, New York, NY, USA
- Ambulatory Care Network, New York Presbyterian Hospital, New York, NY, USA
| | - Stephanie Silver
- Department of Medicine, College of Physicians and Surgeons, Columbia University Irving Medical Center, New York, NY, USA
| | - Joseph P Eimicke
- Department of Medicine, College of Physicians and Surgeons, Columbia University Irving Medical Center, New York, NY, USA
| | - Jian Kong
- Department of Medicine, College of Physicians and Surgeons, Columbia University Irving Medical Center, New York, NY, USA
| | - Terry E Goldberg
- Department of Psychiatry, College of Physicians and Surgeons, CUIMC, New York, NY, USA
- New York State Psychiatric Institute, New York, NY, USA
| | - Davangere P Devanand
- Department of Psychiatry, College of Physicians and Surgeons, CUIMC, New York, NY, USA
- New York State Psychiatric Institute, New York, NY, USA
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Ibtida I, Ma X, Al-Sadawi M, Kosmidou I, Herrmann J, Liu JE, Okin PM, Yu AF. Independent and Incremental Value of ECG Markers for Prediction of Cancer Therapy-Related Cardiac Dysfunction. J Am Heart Assoc 2025; 14:e039203. [PMID: 40240957 DOI: 10.1161/jaha.124.039203] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 10/01/2024] [Accepted: 01/27/2025] [Indexed: 04/18/2025]
Abstract
BACKGROUND Strategies to estimate risk of cancer therapy-related cardiac dysfunction (CTRCD) before initiating cardiotoxic cancer treatment are needed. We hypothesized that baseline ECG markers could identify patients at risk for CTRCD. METHODS AND RESULTS In this retrospective cohort study, 1278 female patients with stage I-III HER2 (human epidermal growth factor receptor 2)-positive breast cancer meeting the following inclusion criteria were included: baseline ECG with QRS <120 milliseconds, baseline echocardiogram, and ≥1 follow-up echocardiogram. Quantitative measurements of ECG waveform parameters were performed using MUSE (GE Healthcare). The primary outcome of interest was CTRCD at 1 year, defined by left ventricular ejection fraction decline (≥10% to <53% or ≥16% from baseline), or clinical heart failure (New York Heart Association class III/IV). Mean age was 51.7±11.1 years, 990 (77%) received anthracyclines, and all received HER2-targeted therapy. CTRCD occurred in 160 (13%) patients. In a multivariable Cox proportional hazards model adjusting for our previously published CTRCD risk score (composed of patient and treatment-specific factors), 4 ECG markers remained independently associated with CTRCD risk: QRS axis, R-wave duration (lead II), ST segment deviation (lead II), and Sokolow-Lyon voltage (all P<0.05). Compared with a model using only clinical CTRCD risk variables, addition of ECG parameters provided incremental value for predicting CTRCD risk (P<0.001, likelihood ratio test) with continuous net reclassification improvement of 34.9% and integrated discrimination improvement of 3.4%. CONCLUSIONS Baseline ECG variables are predictive of subsequent CTRCD and provide incremental value to established clinical risk factors for CTRCD risk classification.
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Affiliation(s)
- Ishmam Ibtida
- Department of Medicine, Cardiology Service Memorial Sloan Kettering Cancer Center New York New York USA
| | - Xiaoyue Ma
- Division of Biostatistics and Epidemiology, Department of Health Care Policy and Research Weill Cornell Medicine New York New York USA
| | - Mohammed Al-Sadawi
- Department of Medicine, Cardiology Service Memorial Sloan Kettering Cancer Center New York New York USA
| | - Ioanna Kosmidou
- Department of Medicine, Cardiology Service Memorial Sloan Kettering Cancer Center New York New York USA
- Department of Medicine Weill Cornell Medical College New York New York USA
| | - Joerg Herrmann
- Department of Cardiovascular Medicine Mayo Clinic Rochester Minnesota USA
| | - Jennifer E Liu
- Department of Medicine, Cardiology Service Memorial Sloan Kettering Cancer Center New York New York USA
- Department of Medicine Weill Cornell Medical College New York New York USA
| | - Peter M Okin
- Greenberg Division of Cardiology, Department of Medicine Weill Cornell Medicine New York New York USA
| | - Anthony F Yu
- Department of Medicine, Cardiology Service Memorial Sloan Kettering Cancer Center New York New York USA
- Department of Medicine Weill Cornell Medical College New York New York USA
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11
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Luo Y, Gu X, Cao W, Dong Q. Proximal Single Subcortical Infarction, Left Ventricular Fractional Shortening, and Risk Prediction Model Development for Neurological Deterioration in Patients With Anterior Circulation Single Subcortical Infarction. J Am Heart Assoc 2025; 14:e040337. [PMID: 40357665 DOI: 10.1161/jaha.124.040337] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 11/27/2024] [Accepted: 04/09/2025] [Indexed: 05/15/2025]
Abstract
BACKGROUND With different infarct morphological characteristics included, the relationship between single subcortical infarction type and neurological deterioration (ND) remains unclear. Similarly, the diagnostic value of the known risk factors is also uncertain. METHODS We conducted a prospective observational study at a tertiary teaching hospital affiliated with Fudan University, enrolling patients with anterior circulation single subcortical infarction within 24 hours of symptom onset from 2017 to 2018. Clinical data, magnetic resonance imaging infarct characteristics, and echocardiographic indices were analyzed using a multivariable logistic regression model to identify independent ND predictors. The receiver operating characteristic curve with multiple testing corrections was performed to assess the discriminatory abilities of different models and the calibration curve for the accuracy of the optimal model. RESULTS The study included 298 patients, with 80 (26.85%) experiencing ND. Multivariate analysis identified admission National Institutes of Health Stroke Scale score (odds ratio [OR], 1.197 [95% CI, 1.067-1.343], P=0.002), proximal single subcortical infarction (OR, 3.311 [95% CI, 1.608-6.817], P=0.001), maximal diameter on axial DWI (OR, 1.651 [95% CI, 1.042-2.617], P=0.033), and left ventricular fractional shortening (OR, 0.001 [95% CI, 0.000-0.282], P=0.021) as independent predictors of ND. The optimal model, including the independent predictors and parent artery disease, demonstrated improved discrimination (area under the curve=0.762) and good calibration (Hosmer-Lemeshow P=0.51). left ventricular fractional shortening contributed positively to this model's performance (net reclassification improvement: 24.8%, P=0.051; integrated discrimination index: 2.1%, P=0.018). CONCLUSIONS When considering different infarct morphological characteristics simultaneously, SSI type remains an independent predictor of ND in patients with anterior circulation SSI. Furthermore, our research indicated left ventricular fractional shortening as a novel predictor, which can improve the discriminative ability of the prediction model.
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Affiliation(s)
- Yunhe Luo
- Department of Neurology, Minhang Hospital Fudan University Shanghai China
- Department of Neurology, Huashan Hospital Fudan University Shanghai China
| | - Xin Gu
- Department of Neurology, Minhang Hospital Fudan University Shanghai China
| | - Wenjie Cao
- Department of Neurology, Huashan Hospital Fudan University Shanghai China
| | - Qiang Dong
- Department of Neurology, Huashan Hospital Fudan University Shanghai China
- State Key Laboratory of Medical Neurobiology Fudan University Shanghai China
- National Clinical Research Center for Aging and Medicine, Huashan Hospital Fudan University Shanghai China
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12
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Cailes B, Huber EL, Brick C, Farouque O, Majumdar A, Al-Fiadh A, Theuerle J, Rodrigues TS, Lancefield T, Yudi MB, Yeoh J, Testro A, Sinclair M, Koshy AN. Blunted Cardiac Reserve as a Marker of Cirrhotic Cardiomyopathy - Cardiac Outcomes Following Liver Transplantation and Comparison to the Existing Guidelines. Am J Transplant 2025:S1600-6135(25)00279-5. [PMID: 40398563 DOI: 10.1016/j.ajt.2025.05.022] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/01/2025] [Revised: 05/14/2025] [Accepted: 05/15/2025] [Indexed: 05/23/2025]
Abstract
Cirrhotic cardiomyopathy (CCM) is an underrecognized risk factor for cardiac events in patients undergoing liver transplantation (LT). Blunted cardiac reserve (BCR) is an emerging indicator of CCM, although it has not been integrated into diagnostic guidelines. This study assesses post-transplant cardiac outcomes and mortality in patients with BCR compared to current CCM diagnostic guidelines, focusing on diastolic indices. Consecutive patients undergoing liver transplant assessment were included. Of 978 patients screened with dobutamine stress echocardiography between 2010-2023, 481 (58.0%) progressed to LT, with 183 (38.0%) meeting BCR criteria and 117 (24.3%) meeting existing CCM diagnostic criteria. Thirty (6.2%) patients suffered a 30-day major adverse cardiovascular event (MACE), and 92 patients (19.1%) died on long-term follow-up. Following multivariate regression analysis, BCR was the strongest independent risk factor for post-operative MACE (HR 2.57 (1.13-5.85), p=0.024), heart failure exacerbations (HR 6.93 (1.46-33.01), p=0.015), and 30-day mortality (HR 9.69 (1.04-92.33), p=0.049). Addition of BCR to the existing guidelines improved MACE prediction (HR 5.81 (1.71-19.76) vs 2.59 (1.15-5.87), p=0.006), with a net reclassification improvement index of 41.9% (p=0.004) compared to existing guidelines alone. These results support the integration of a cardiac reserve assessment into CCM diagnostic criteria, and use in risk stratification of patients undergoing LT.
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Affiliation(s)
- Benjamin Cailes
- The University of Melbourne Clinical School, Austin Health, Department of Cardiology, Melbourne, Victoria, Australia
| | - Eva-Louise Huber
- The University of Melbourne Clinical School, Austin Health, Department of Cardiology, Melbourne, Victoria, Australia
| | - Claudia Brick
- The University of Melbourne Clinical School, Austin Health, Department of Cardiology, Melbourne, Victoria, Australia
| | - Omar Farouque
- The University of Melbourne Clinical School, Austin Health, Department of Cardiology, Melbourne, Victoria, Australia
| | - Avik Majumdar
- Victorian Liver Transplant Unit, Austin Health, Melbourne, Victoria, Australia
| | - Ali Al-Fiadh
- The University of Melbourne Clinical School, Austin Health, Department of Cardiology, Melbourne, Victoria, Australia
| | - James Theuerle
- The University of Melbourne Clinical School, Austin Health, Department of Cardiology, Melbourne, Victoria, Australia
| | - Thalys S Rodrigues
- The University of Melbourne Clinical School, Austin Health, Department of Cardiology, Melbourne, Victoria, Australia
| | - Terase Lancefield
- The University of Melbourne Clinical School, Austin Health, Department of Cardiology, Melbourne, Victoria, Australia
| | - Matias B Yudi
- The University of Melbourne Clinical School, Austin Health, Department of Cardiology, Melbourne, Victoria, Australia
| | - Julian Yeoh
- The University of Melbourne Clinical School, Austin Health, Department of Cardiology, Melbourne, Victoria, Australia
| | - Adam Testro
- Victorian Liver Transplant Unit, Austin Health, Melbourne, Victoria, Australia
| | - Marie Sinclair
- Victorian Liver Transplant Unit, Austin Health, Melbourne, Victoria, Australia
| | - Anoop N Koshy
- The University of Melbourne Clinical School, Austin Health, Department of Cardiology, Melbourne, Victoria, Australia.
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Qin Y, Zhang LG, Zhou X, Song C, Wu Y, Tang M, Ling Z, Wang J, Cai H, Peng Z, Feng ST. Explainable Fusion Model for Predicting Postoperative Early Recurrence in Hepatocellular Carcinoma Using Gadoxetic Acid-Enhanced MRI Habitat Imaging. Acad Radiol 2025:S1076-6332(25)00317-4. [PMID: 40379586 DOI: 10.1016/j.acra.2025.04.018] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/04/2025] [Revised: 03/17/2025] [Accepted: 04/07/2025] [Indexed: 05/19/2025]
Abstract
RATIONALE AND OBJECTIVES To develop an explainable fusion model that combines clinical, radiomic, and habitat features to predict postoperative early recurrence in hepatocellular carcinoma (HCC). METHODS The bicentric retrospective study included 370 patients with surgically confirmed early-stage HCC who underwent gadoxetic acid-enhanced MRI. The patients were stratified into a training cohort (n=296) and an external validation cohort (n=74). From the hepatobiliary phase images, habitat and radiomics features were extracted across the entire tumor and used to construct radiomics and habitat models. Additionally, a clinical model was established utilizing relevant clinical features. Subsequently, all previously mentioned features were merged to construct the fusion model (HabRad_FB). Diagnostic performance of these models was assessed and compared using the area under the receiver operating characteristic curve (AUC), net reclassification index (NRI), and integrated discrimination improvement (IDI). The fusion model was then interpreted using SHapley Additive exPlanations (SHAP) analysis. RESULTS Tumor recurrence was observed in 73 out of 370 patients (19.7%; 55.2±11.3 years; male=333). Among all study cohorts, the HabRad_FB model showed the highest AUC (0.820-0.959), outperforming the clinical (0.517-0.729), radiomics (0.707-0.815), and habitat (0.729-0.861) models. The HabRad_FB model also demonstrated significant improvement in IDI in the training cohort and NRI in the validation cohort. SHAP force plots provided valuable insights into the interpretation of HabRad_FB model's predictions for early recurrence. CONCLUSION The HabRad_FB, an explainable fusion model, aids clinicians in accurately and non-invasively predicting the early recurrence of HCC preoperatively. This model might provide great potential in prognostic prediction and clinical management.
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Affiliation(s)
- Yanjin Qin
- Department of Radiology, The First Affiliated Hospital, Sun Yat-Sen University, 58 Zhongshan Road 2nd, Guangzhou 510080, China
| | - Lie-Guang Zhang
- Department of Radiology, Guangzhou Eighth People's Hospital, Guangzhou, Medical University, Guangzhou 510060, China
| | - Xiaoqi Zhou
- Department of Radiology, The First Affiliated Hospital, Sun Yat-Sen University, 58 Zhongshan Road 2nd, Guangzhou 510080, China
| | - Chenyu Song
- Department of Radiology, The First Affiliated Hospital, Sun Yat-Sen University, 58 Zhongshan Road 2nd, Guangzhou 510080, China
| | - Yuxin Wu
- Department of Radiology, The First Affiliated Hospital, Sun Yat-Sen University, 58 Zhongshan Road 2nd, Guangzhou 510080, China
| | - Mimi Tang
- Department of Radiology, The First Affiliated Hospital, Sun Yat-Sen University, 58 Zhongshan Road 2nd, Guangzhou 510080, China
| | - Zhoukun Ling
- Department of Radiology, Guangzhou Eighth People's Hospital, Guangzhou, Medical University, Guangzhou 510060, China
| | - Jifei Wang
- Department of Radiology, The First Affiliated Hospital, Sun Yat-Sen University, 58 Zhongshan Road 2nd, Guangzhou 510080, China
| | - Huasong Cai
- Department of Radiology, The First Affiliated Hospital, Sun Yat-Sen University, 58 Zhongshan Road 2nd, Guangzhou 510080, China
| | - Zhenpeng Peng
- Department of Radiology, The First Affiliated Hospital, Sun Yat-Sen University, 58 Zhongshan Road 2nd, Guangzhou 510080, China
| | - Shi-Ting Feng
- Department of Radiology, The First Affiliated Hospital, Sun Yat-Sen University, 58 Zhongshan Road 2nd, Guangzhou 510080, China.
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Luo H, Li G, Chen Y, Shen Y, Shen W. Association of platelet-to-high-density lipoprotein cholesterol ratio and its cumulative exposure with cardiovascular disease risk: a prospective cohort study in Chinese population. Front Cardiovasc Med 2025; 12:1580359. [PMID: 40416811 PMCID: PMC12098545 DOI: 10.3389/fcvm.2025.1580359] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/20/2025] [Accepted: 04/25/2025] [Indexed: 05/27/2025] Open
Abstract
Objective This study aimed to investigate the association of platelet-to-high-density lipoprotein cholesterol ratio (PHR) and its cumulative exposure with cardiovascular disease (CVD) risk. Methods The investigation utilized data from the China Health and Retirement Longitudinal Study (CHARLS). Platelet-to-high-density lipoprotein cholesterol ratio was calculated as platelet count (×10⁹/L)/high-density lipoprotein cholesterol (mmol/L), and a cumulative platelet-to-high-density lipoprotein cholesterol ratio (Cumulative PHR) was derived for longitudinal assessment. Multivariable logistic regression models were used to evaluate the association between PHR, cumulative PHR, and CVD risk across three models with increasing adjustments for confounders. Restricted cubic splines (RCS) regressions were utilized to examine if there were non-linear relationships. Subgroup analyses were conducted to enhance the reliability of the study findings. Furthermore, predictive performance was assessed using concordance index (C-index), net reclassification improvement (NRI), and integrated discrimination improvement (IDI). Results A total of 7,063 participants aged 45 and older were included, of whom 1,433 (20.29%) experienced a cardiovascular disease. Participants with CVD had higher PHR (167.93 vs. 156.84, P < 0.001) and Log PHR (5.12 vs. 5.06, P < 0.001) values compared to non-CVD participants. Multivariable logistic regression revealed that Log PHR was independently associated with CVD risk [Odds ratio (OR) per-unit: 1.30, 95% confidence interval (CI): 1.13-1.49, P < 0.001; OR per- standard deviation (SD): 1.13, 95% CI: 1.06-1.21, P < 0.001]. Log cumulative PHR showed similar associations (OR per-unit: 1.34, 95% CI: 1.05-1.71, P = 0.02). Participants in the highest quartile of Log PHR had a nearly 1.32-fold higher risk of CVD compared to the lowest quartile (OR: 1.32, 95% CI: 1.10-1.57, P = 0.002). Addition of Log PHR and Log cumulative PHR slightly improved predictive performance metrics of baseline model. Conclusion Both Log PHR and Log cumulative PHR are independently associated with increased CVD risk and slightly improved the predictive performance of the baseline risk model. Future research should focus on its clinical implementation and integration into existing risk assessment frameworks.
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Affiliation(s)
- Honglian Luo
- Department of Neurology, Wuhan Fourth Hospital (Wuhan Puai Hospital), Tongji Medical College, Huazhong University of Science and Technology, Wuhan, Hubei, China
| | - Gang Li
- Department of Neurology, Wuhan Fourth Hospital (Wuhan Puai Hospital), Tongji Medical College, Huazhong University of Science and Technology, Wuhan, Hubei, China
| | - Yan Chen
- Department of Neurology, Wuhan Fourth Hospital (Wuhan Puai Hospital), Tongji Medical College, Huazhong University of Science and Technology, Wuhan, Hubei, China
| | - Yun Shen
- Division of Population and Public Health Science, Pennington Biomedical Research Center, Baton Rouge, LA, United States
| | - Wei Shen
- Department of Neurology, Wuhan Fourth Hospital (Wuhan Puai Hospital), Tongji Medical College, Huazhong University of Science and Technology, Wuhan, Hubei, China
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Sun J, Yang L, Ma C, Yang L, Zhao M, Magnussen CG, Xi B. Alteration of gut microbiota associated with hypertension in children. BMC Microbiol 2025; 25:282. [PMID: 40340772 PMCID: PMC12060425 DOI: 10.1186/s12866-025-03999-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/18/2024] [Accepted: 04/25/2025] [Indexed: 05/10/2025] Open
Abstract
BACKGROUND The association of disturbance in gut microbiota with hypertension (HTN) defined on three separate occasions among children and adolescents remains unclear. In this study, we aimed to compare the differences in gut microbiota composition and diversity between children with HTN and those with normal blood pressure (BP). METHODS Data and stool samples were collected from the second follow-up of a childhood cardiovascular health cohort study in 2021. 16 S ribosomal RNA gene sequencing was conducted to determine the relative abundance of microbial taxa in 51 children aged 10-14 years with HTN and 51 children with normal BP. RESULTS Compared with children with normal BP, those with HTN had decreased gut microbiome diversity. At the genus level, after adjusting for the false discovery rate (FDR), the proportions of several gut microbiota such as Blautia (PFDR=0.042), Coprococcus (PFDR=0.042), Eubacterium_ventriosum_group (PFDR=0.027), Christensenellaceae_R-7_group (PFDR=0.027), and norank_f__Lachnospiraceae (PFDR=0.015) significantly decreased in children with HTN compared to those with normal BP. Receiver operating characteristic analysis, net reclassification improvement (NRI) and integrated discrimination improvement (IDI) were performed and showed that the genera norank_f__Lachnospiraceae and Dorea significantly enhanced the ability of body mass index to differentiate between children with HTN and those with normal BP (area under the receiver operating characteristic curve: 0.95, 95% confidence interval 0.91-0.99; NRI > 0; IDI = 0.12, P < 0.05). Phylogenetic Investigation of Communities by Reconstruction of Unobserved States showed that the mean proportions of cofactors and vitamins metabolism pathway and the glycan anabolism pathway were higher in children with HTN. CONCLUSIONS Disturbances in the abundance and diversity of gut microbiota may contribute to the development of HTN in children. Gut microbiota biomarkers may be of significant importance in the early identification and diagnosis of childhood HTN. CLINICAL TRIAL NUMBER Not applicable.
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Affiliation(s)
- Jiahong Sun
- Department of Preventive Medicine, School of Public Health, Guangdong Medical University, Dongguan, Guangdong, China
- Department of Epidemiology, School of Public Health, Cheeloo College of Medicine, Shandong University, 44 Wen Hua Xi Road, Jinan, 250012, Shandong, China
| | - Liu Yang
- Clinical Research Center, Women's Hospital, School of Medicine, Zhejiang University, Hangzhou, Zhejiang, China
| | - Chuanwei Ma
- Department of Epidemiology and Health Statistics, School of Public Health, Guangdong Medical University, Dongguan, Guangdong, China
| | - Lili Yang
- Department of Epidemiology, School of Public Health, Cheeloo College of Medicine, Shandong University, 44 Wen Hua Xi Road, Jinan, 250012, Shandong, China
| | - Min Zhao
- Department of Nutrition and Food Hygiene, School of Public Health, Cheeloo College of Medicine, Shandong University, Jinan, Shandong, China
| | - Costan G Magnussen
- Baker Heart and Diabetes Institute, Melbourne, Australia
- Research Centre of Applied and Preventive Cardiovascular Medicine, University of Turku, Turku, Finland
- Centre for Population Health Research, University of Turku, Turku University Hospital, Turku, Finland
| | - Bo Xi
- Department of Epidemiology, School of Public Health, Cheeloo College of Medicine, Shandong University, 44 Wen Hua Xi Road, Jinan, 250012, Shandong, China.
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Chen M, Miao G, Roman MJ, Devereux RB, Fabsitz RR, Zhang Y, Umans JG, Cole SA, Fiehn O, Zhao J. Longitudinal Lipidomic Profile of Subclinical Peripheral Artery Disease in American Indians: The Strong Heart Family Study. Prev Chronic Dis 2025; 22:E18. [PMID: 40338792 PMCID: PMC12087469 DOI: 10.5888/pcd22.240220] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/10/2025] Open
Abstract
Introduction Peripheral artery disease (PAD) and dyslipidemia are both independent predictors of cardiovascular disease, but the association between individual lipid species and subclinical PAD, assessed by ankle-brachial index (ABI), is lacking in large-scale longitudinal studies. Methods We used liquid chromatography-mass spectrometry to repeatedly measure 1,542 lipid species from 1,886 American Indian adults attending 2 clinical examinations (mean ~5 years apart) in the Strong Heart Family Study. We used generalized estimating equation models to identify baseline lipid species associated with change in ABI and the Cox frailty regression to examine whether lipids associated with change in ABI were also associated with incident coronary heart disease (CHD). We also examined the longitudinal association between change in lipid species and change in ABI and the cross-sectional association of individual lipids with ABI. All models were adjusted for age, sex, body mass index, smoking, alcohol use, hypertension, estimated glomerular filtration rate, diabetes, and lipid-lowering medication. Results Baseline levels of 120 lipid species, including glycerophospholipids, glycerolipids, fatty acids, and sphingomyelins, were associated with change in ABI. Among these, higher baseline levels of 3 known lipids (phosphatidylinositol[16:0/20:4], triacylglycerol[48:2], triacylglycerol[55:1]) were associated with a lower risk of CHD (hazard ratios [95% CIs] ranged from 0.67 [0.46-0.99] to 0.76 [0.58-0.99]), while cholesterol was associated with a higher risk of CHD (hazard ratio [95% CI] = 1.37 [1.00-1.87]). Longitudinal changes in 32 lipids were significantly associated with change in ABI during 5-year follow-up. Plasma levels of glycerophospholipids, triacylglycerols, and glycosylceramides were significantly associated with ABI in the cross-sectional analysis. Conclusion Altered plasma lipidome is significantly associated with subclinical PAD in American Indians beyond traditional risk factors. If validated, the identified lipid species may serve as novel biomarkers for PAD in this high-risk but understudied population.
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Affiliation(s)
- Mingjing Chen
- Department of Epidemiology, College of Public Health & Health Professions, University of Florida, Gainesville
| | - Guanhong Miao
- Department of Epidemiology, College of Public Health & Health Professions, University of Florida, Gainesville
| | - Mary J Roman
- Division of Cardiology, Weill Cornell Medical College, New York, New York
| | - Richard B Devereux
- Division of Cardiology, Weill Cornell Medical College, New York, New York
| | | | - Ying Zhang
- Department of Biostatistics and Epidemiology, University of Oklahoma Health Sciences Center, Oklahoma City
| | - Jason G Umans
- MedStar Health Research Institute, Hyattsville, Maryland
- Georgetown-Howard Universities Center for Clinical and Translational Science, Washington, District of Columbia
| | | | - Oliver Fiehn
- West Coast Metabolomics Center, University of California, Davis
| | - Jinying Zhao
- Department of Epidemiology, College of Public Health & Health Professions, University of Florida, 2004 Mowry Rd, Gainesville, FL 32610
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Kudo M, Sasaki S, Takada T, Fujii K, Yagi Y, Yano T, Sada K, Fukuhara S, Suganuma N. Predicting 30-day mortality in older patients with suspected infections by adding performance status to quick sequential organ failure assessment. J Gen Fam Med 2025; 26:238-245. [PMID: 40291055 PMCID: PMC12022432 DOI: 10.1002/jgf2.764] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/08/2024] [Revised: 10/12/2024] [Accepted: 12/17/2024] [Indexed: 04/30/2025] Open
Abstract
Background Quick Sequential Organ Failure Assessment (qSOFA) is a simple and easy tool for identifying patients with suspected infection, who are at a high risk of poor outcome. However, its predictive performance is still insufficient. The Eastern Cooperative Oncology Group Performance Status (ECOG-PS) score, a tool to evaluate physical function, has been recently reported to be useful in predicting the prognosis of patients with pneumonia. We aimed to evaluate the added value of ECOG-PS to qSOFA in predicting 30-day mortality in older patients admitted with suspected infections. Methods Between 2018 and 2019, we prospectively collected data from adults aged 65 years or older, admitted with suspected infection at two acute care hospitals. Predictive performance was compared between two logistic regression models: one using qSOFA score alone (qSOFA model) and the other in which ECOG-PS was added to qSOFA (extended model). Results Of the 1536 enrolled patients, 135 (8.8%) died within 30 days. The area under the curve of the extended model was significantly higher than that of the qSOFA model (0.67 vs. 0.64, p = 0.008). When the risk groups were categorized as follows: low (<5%), intermediate (5%-10%), and high (≥10%), 5.0% of those who died and 2.1% of those who survived were correctly reclassified by the extended model with an overall categorized net reclassification improvement of 0.03 (95% confidence interval: -0.06 to 0.30). Conclusions Adding the ECOG-PS score could improve the performance of qSOFA in predicting mortality in older patients admitted with suspected infection.
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Affiliation(s)
- Masataka Kudo
- Department of General Internal MedicineIizuka HospitalFukuokaJapan
- Department of Clinical EpidemiologyKochi Medical SchoolNankokuJapan
- Department of Internal MedicineInan HospitalKochiJapan
| | - Sho Sasaki
- Section of Education for Clinical ResearchKyoto University HospitalKyotoJapan
- Clinical Research Support OfficeIizuka HospitalFukuokaJapan
| | - Toshihiko Takada
- Department of General Medicine, Shirakawa Satellite for Teaching and Research (STAR)Fukushima Medical UniversityFukushimaJapan
| | - Kotaro Fujii
- Department of General Medicine, Shirakawa Satellite for Teaching and Research (STAR)Fukushima Medical UniversityFukushimaJapan
- Department of Healthcare Epidemiology, School of Public Health in the Graduate School of MedicineKyoto UniversityKyotoJapan
- Academic and Research CentreHokkaido Centre for Family MedicineSapporoJapan
| | - Yu Yagi
- Department of General Internal MedicineIizuka HospitalFukuokaJapan
| | - Tetsuhiro Yano
- Department of General Medicine, Shirakawa Satellite for Teaching and Research (STAR)Fukushima Medical UniversityFukushimaJapan
| | - Ken‐ei Sada
- Department of Clinical EpidemiologyKochi Medical SchoolNankokuJapan
| | - Shunichi Fukuhara
- Section of Clinical Epidemiology, Department of Community Medicine, Graduate School of MedicineKyoto UniversityKyotoJapan
| | - Narufumi Suganuma
- Medical School, Medical Course, Department of Human Health and Medical SciencesKochi Medical SchoolNankokuJapan
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Wang Z, Zhang K, Zhong C, Zhu Z, Zheng X, Yang P, Che B, Lu Y, Zhang Y, Xu T. Plasma human cartilage glycoprotein-39 and depressive symptoms among acute ischemic stroke patients. Gen Hosp Psychiatry 2025; 94:120-125. [PMID: 40068363 DOI: 10.1016/j.genhosppsych.2025.03.003] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 12/18/2024] [Revised: 03/05/2025] [Accepted: 03/05/2025] [Indexed: 04/12/2025]
Abstract
OBJECTIVE Our study aimed at evaluating the association between plasma human cartilage glycoprotein-39 (YKL-40) and depressive symptoms at 3 months among acute ischemic stroke patients. METHODS Plasma YKL-40 levels were measured in 619 patients with ischemic stroke who participated in the China Antihypertensive Trial in Acute Ischemic Stroke (CATIS). The patients' depressive symptoms at 3 months after stroke were assessed using the Hamilton Rating Scale for Depression (HRSD-24). RESULTS During the 3-month follow-up period, 242 (39.1 %) participants were classified as experiencing depressive symptoms. Patients in the highest quartile of YKL-40 had a 1.98-fold (95 %CI: 1.19-3.30, P for trend = 0.02) risk of depressive symptoms compared with those in the lowest quartile. Per 1-SD increase of logarithm-transformed YKL-40 was associated with a 32 % (95 % CI: 10 %-58 %) increased risk for the depressive symptoms. The multiple-adjusted spline regression model confirmed dose-response relationships between YKL-40 levels and depressive symptoms (P for linearity = 0.02). Adding YKL-40 to a model containing conventional risk factors significantly improved the discriminatory power (area under the receiver operating characteristic curve improved by 0.02, P = 0.04) and reclassification power for depressive symptoms (net reclassification improvement = 18.77 %, P = 0.02; integrated discrimination improvement = 1.30 %, P = 0.005). CONCLUSIONS Elevated YKL-40 levels might be a potential risk marker of depressive symptoms at 3 months among acute ischemic stroke patients. REGISTRATION URL: https://www. CLINICALTRIALS gov; Unique identifier: NCT01840072.
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Affiliation(s)
- Ziyi Wang
- Department of Neurology, Affiliated Hospital of Nantong University, Medical School of Nantong University, Nantong 226001, China
| | - Kaixin Zhang
- Department of Clinical Research Center, Wuxi No.2 People's Hospital (Jiangnan University Medical Center), Wuxi, Jiangsu 214002, China; Department of Epidemiology, School of Public Health and Jiangsu Key Laboratory of Preventive and Translational Medicine for Major Chronic Non-communicable Diseases, MOE Key Laboratory of Geriatric Diseases and Immunology, Suzhou Medical College of Soochow University, Suzhou 215123, China
| | - Chongke Zhong
- Department of Epidemiology, School of Public Health and Jiangsu Key Laboratory of Preventive and Translational Medicine for Major Chronic Non-communicable Diseases, MOE Key Laboratory of Geriatric Diseases and Immunology, Suzhou Medical College of Soochow University, Suzhou 215123, China
| | - Zhengbao Zhu
- Department of Epidemiology, School of Public Health and Jiangsu Key Laboratory of Preventive and Translational Medicine for Major Chronic Non-communicable Diseases, MOE Key Laboratory of Geriatric Diseases and Immunology, Suzhou Medical College of Soochow University, Suzhou 215123, China
| | - Xiaowei Zheng
- Department of Epidemiology, School of Public Health and Jiangsu Key Laboratory of Preventive and Translational Medicine for Major Chronic Non-communicable Diseases, MOE Key Laboratory of Geriatric Diseases and Immunology, Suzhou Medical College of Soochow University, Suzhou 215123, China
| | - Pinni Yang
- Department of Epidemiology, School of Public Health and Jiangsu Key Laboratory of Preventive and Translational Medicine for Major Chronic Non-communicable Diseases, MOE Key Laboratory of Geriatric Diseases and Immunology, Suzhou Medical College of Soochow University, Suzhou 215123, China
| | - Bizhong Che
- Department of Epidemiology, School of Public Health and Jiangsu Key Laboratory of Preventive and Translational Medicine for Major Chronic Non-communicable Diseases, MOE Key Laboratory of Geriatric Diseases and Immunology, Suzhou Medical College of Soochow University, Suzhou 215123, China
| | - Yaling Lu
- Department of Epidemiology, School of Public Health and Jiangsu Key Laboratory of Preventive and Translational Medicine for Major Chronic Non-communicable Diseases, MOE Key Laboratory of Geriatric Diseases and Immunology, Suzhou Medical College of Soochow University, Suzhou 215123, China
| | - Yonghong Zhang
- Department of Epidemiology, School of Public Health and Jiangsu Key Laboratory of Preventive and Translational Medicine for Major Chronic Non-communicable Diseases, MOE Key Laboratory of Geriatric Diseases and Immunology, Suzhou Medical College of Soochow University, Suzhou 215123, China
| | - Tian Xu
- Department of Neurology, Affiliated Hospital of Nantong University, Nantong 226001, China..
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Saeed A, Gin C, Hodgson LAB, Jannaud M, Hadoux X, Glover EK, Gee EE, van Wijngaarden P, Guymer RH, Wu Z. Local OCT Structural Correlates of Deep Visual Sensitivity Defects in Early Atrophic Age-Related Macular Degeneration. Ophthalmol Retina 2025; 9:412-420. [PMID: 39672305 DOI: 10.1016/j.oret.2024.12.007] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/23/2024] [Revised: 11/07/2024] [Accepted: 12/04/2024] [Indexed: 12/15/2024]
Abstract
PURPOSE To determine local OCT structural correlates of deep visual sensitivity defects (threshold of ≤10 decibels on microperimetry) in early atrophic age-related macular degeneration (AMD). DESIGN Prospective observational study. PARTICIPANTS Forty eyes from 40 participants, with at least incomplete retinal pigment epithelium (RPE) and outer retinal atrophy, or more advanced atrophic lesion(s). METHODS Participants underwent ≥2 targeted, high-density microperimetry tests of atrophic lesions of interest in 1 eye, and high-density 3×3-mm volume scans of that region on a swept-source OCT angiography device, all at a single visit. Seven OCT-defined features of atrophy were manually annotated: hypertransmission, RPE attenuation/disruption, complete RPE loss, ellipsoid zone disruption, external limiting membrane (ELM) disruption, subsidence of the outer plexiform layer and inner nuclear layer, and/or hyporeflective wedge-shaped band, and outer nuclear layer (ONL) thickness. MAIN OUTCOME MEASURES Association between OCT-defined features of atrophy and presence of a deep visual sensitivity defect at a local, pointwise level. RESULTS All OCT-defined features of atrophy were individually associated with the presence of a deep visual sensitivity defect at a pointwise level in univariable mixed-effects logistic regression analyses (P < 0.001 for all). However, only hypertransmission, complete RPE loss, ELM disruption, and ONL thickness remained significantly and independently associated with deep visual sensitivity defects in a multivariable analysis (P ≤ 0.011). A prediction model incorporating these 4 OCT features (partial area under the curve [pAUC] at ≥90% specificity = 0.80) outperformed models using any single feature alone in predicting the presence of deep visual sensitivity defects (pAUC = 0.65 to 0.78, respectively; P ≥ 0.040). CONCLUSIONS The study identified hypertransmission, complete RPE loss, ELM disruption, and ONL thickness as key OCT-defined features of atrophy independently associated with deep visual sensitivity defects. These findings are important when considering anatomical outcome measures for evaluating interventions for early atrophic AMD that are most likely to capture beneficial treatment effects that will be accompanied by evidence of functional preservation if measured directly. FINANCIAL DISCLOSURE(S) Proprietary or commercial disclosure may be found in the Footnotes and Disclosures at the end of this article.
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Affiliation(s)
- Abera Saeed
- Centre for Eye Research Australia, Royal Victorian Eye and Ear Hospital, East Melbourne, Australia; Ophthalmology, Department of Surgery, The University of Melbourne, Melbourne, Australia
| | - Callum Gin
- Centre for Eye Research Australia, Royal Victorian Eye and Ear Hospital, East Melbourne, Australia
| | - Lauren A B Hodgson
- Centre for Eye Research Australia, Royal Victorian Eye and Ear Hospital, East Melbourne, Australia
| | - Maxime Jannaud
- Centre for Eye Research Australia, Royal Victorian Eye and Ear Hospital, East Melbourne, Australia
| | - Xavier Hadoux
- Centre for Eye Research Australia, Royal Victorian Eye and Ear Hospital, East Melbourne, Australia; Ophthalmology, Department of Surgery, The University of Melbourne, Melbourne, Australia
| | - Emily K Glover
- Centre for Eye Research Australia, Royal Victorian Eye and Ear Hospital, East Melbourne, Australia
| | - Erin E Gee
- Centre for Eye Research Australia, Royal Victorian Eye and Ear Hospital, East Melbourne, Australia
| | - Peter van Wijngaarden
- Centre for Eye Research Australia, Royal Victorian Eye and Ear Hospital, East Melbourne, Australia; Ophthalmology, Department of Surgery, The University of Melbourne, Melbourne, Australia
| | - Robyn H Guymer
- Centre for Eye Research Australia, Royal Victorian Eye and Ear Hospital, East Melbourne, Australia; Ophthalmology, Department of Surgery, The University of Melbourne, Melbourne, Australia
| | - Zhichao Wu
- Centre for Eye Research Australia, Royal Victorian Eye and Ear Hospital, East Melbourne, Australia; Ophthalmology, Department of Surgery, The University of Melbourne, Melbourne, Australia.
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20
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Malahfji M, Tan X, Kaolawanich Y, Saeed M, Guta A, Reardon MJ, Zoghbi WA, Polsani V, Elliott M, Kim R, Li M, Shah DJ. Machine Learning Identification of Patient Phenoclusters in Aortic Regurgitation. JACC Cardiovasc Imaging 2025; 18:557-568. [PMID: 40146099 PMCID: PMC12058414 DOI: 10.1016/j.jcmg.2025.01.006] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 09/09/2024] [Revised: 12/11/2024] [Accepted: 01/02/2025] [Indexed: 03/28/2025]
Abstract
BACKGROUND Current treatment paradigms assume aortic regurgitation (AR) patients to be a homogenous population, but varied courses of disease progression and outcomes are observed clinically. OBJECTIVES The aim of this study was to first use unsupervised machine learning to identify unique patient phenoclusters in AR, and subsequently evaluate their prognostic relevance. METHODS Clinical and cardiac magnetic resonance (CMR) characterization of moderate or severe AR patients was performed across 4 U.S. CENTERS Data from 2 centers were used for derivation of phenoclusters and validation was performed in the other 2. The outcome was all-cause death. An unsupervised clustering pipeline, Partition Around Medoids, used 23 clinical and CMR variables to derive patient clusters independent of outcomes. RESULTS Included were 972 patients with mean age 62 ± 23.2 years, 754 (78%) male, 680 (70%) trileaflet valve, and 330 (34%) underwent valve surgery. Over a median follow-up of 2.58 years (Q1-Q3: 1.03-5.50 years), the overall mortality rate was 12%. Four clusters were derived: 1) a younger predominantly male phenotype with majority of bicuspid aortic valve and high extent of left ventricular (LV) remodeling (1% mortality); 2) older male patients with predominantly tricuspid valves and intermediate outcomes (10% mortality); 3) older predominantly male patients with the highest burden of comorbidities, LV scarring, and dysfunction (22% mortality); and 4) a phenotype of predominantly female patients with high mortality and relatively higher symptoms burden, relatively lower extent of LV remodeling, and rate of aortic valve replacement (20% mortality). The clustering algorithm was independently associated with survival after adjustment for time-dependent aortic valve replacement and traditional risk markers of prognosis in patients with AR (C statistic 0.77 vs 0.75; P = 0.009 in the validation cohort). CONCLUSIONS Unique patient phenoclusters of AR are described using a machine learning approach leveraging comprehensive CMR and clinical characterization. This approach may be an opportunity for a precision medicine approach to enhance risk stratification of patients with AR. Female patients with AR pose a unique phenotype with high mortality, which deserves greater attention.
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Affiliation(s)
- Maan Malahfji
- Houston Methodist DeBakey Heart and Vascular Center, Houston, Texas, USA
| | - Xin Tan
- Department of Statistics, Rice University, Houston, Texas, USA
| | - Yodying Kaolawanich
- Division of Cardiology, Department of Internal Medicine, Duke University, Durham, North Carolina, USA
| | - Mujtaba Saeed
- Houston Methodist DeBakey Heart and Vascular Center, Houston, Texas, USA
| | - Andrada Guta
- Houston Methodist DeBakey Heart and Vascular Center, Houston, Texas, USA; Division of Cardiology, Department of Medicine, Emergency Clinical Hospital of Bucharest, Bucharest, Romania
| | - Michael J Reardon
- Houston Methodist DeBakey Heart and Vascular Center, Houston, Texas, USA
| | - William A Zoghbi
- Houston Methodist DeBakey Heart and Vascular Center, Houston, Texas, USA
| | | | - Michael Elliott
- Sanger Heart and Vascular Institute, Atrium Health, Charlotte, North Carolina, USA
| | - Raymond Kim
- Division of Cardiology, Department of Internal Medicine, Duke University, Durham, North Carolina, USA
| | - Meng Li
- Department of Statistics, Rice University, Houston, Texas, USA.
| | - Dipan J Shah
- Houston Methodist DeBakey Heart and Vascular Center, Houston, Texas, USA.
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Lord SJ, Horvath AR, Sandberg S, Monaghan PJ, M Cobbaert C, Reim M, Tolios A, Mueller R, Bossuyt PM. Is this test fit-for-purpose? Principles and a checklist for evaluating the clinical performance of a test in the new era of in vitro diagnostic (IVD) regulation. Crit Rev Clin Lab Sci 2025; 62:182-197. [PMID: 39912349 DOI: 10.1080/10408363.2025.2453148] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/17/2024] [Revised: 11/01/2024] [Accepted: 01/09/2025] [Indexed: 02/07/2025]
Abstract
Recent changes in the regulatory assessment of in vitro medical tests reflect a growing recognition of the need for more stringent clinical evidence requirements to protect patient safety and health. Under current regulations in the United States and Europe, when needed for regulatory approval, clinical performance reports must provide clinical evidence tailored to the intended purpose of the test and allow assessment of whether the test will achieve the intended clinical benefit. The quality of evidence must be proportionate to the risk for the patient and/or public health. These requirements now cover both commercial and laboratory developed tests (LDT) and demand a sound understanding of the fundamentals of clinical performance measures and study design to develop and appraise the study plan and interpret the study results. However, there is a lack of harmonized guidance for the laboratory profession, industry, regulatory agencies and notified bodies on how the clinical performance of tests should be measured. The Working Group on Test Evaluation (WG-TE) of the European Federation of Clinical Chemistry and Laboratory Medicine (EFLM) is a multidisciplinary group of laboratory professionals, clinical epidemiologists, health technology assessment experts, and representatives of the in vitro diagnostic (IVD) industry. This guidance paper aims to promote a shared understanding of the principles of clinical performance measures and study design. Measures of classification performance, also referred to as discrimination, such as sensitivity and specificity are firmly established as the primary measures for evaluating the clinical performance for screening and diagnostic tests. We explain these measures are just as relevant for other purposes of testing. We outline the importance of defining the most clinically meaningful classification of disease so the clinical benefits of testing can be explicitly inferred for those correctly classified, and harm for those incorrectly classified. We introduce the key principles and a checklist for formulating the research objective and study design to estimate clinical performance: (1) the purpose of a test e.g. diagnosis, screening, risk stratification, prognosis, prediction of treatment benefit, and corresponding research objective for assessing clinical performance; (2) the target condition for clinically meaningful classification; (3) clinical performance measures to assess whether the test is fit-for-purpose; and (4) study design types. Laboratory professionals, industry, and researchers can use this checklist to help identify relevant published studies and primary datasets, and to liaise with clinicians and methodologists when developing a study plan for evaluating clinical performance, where needed, to apply for regulatory approval.
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Affiliation(s)
- S J Lord
- National Health and Medical Research Council (NHMRC) Clinical Trials Centre, University of Sydney, Sydney, Australia
| | - A R Horvath
- New South Wales Health Pathology Department of Chemical Pathology, Prince of Wales Hospital and School of Medical Sciences, University of New South Wales; School of Public Health, University of Sydney, Australia
| | - S Sandberg
- The Norwegian Quality Improvement of Primary Care Laboratories (NOKLUS), Department of Public Health and Primary Health Care, University of Bergen; and Laboratory of Clinical Biochemistry, Haukeland University Hospital, Norway
| | - P J Monaghan
- Department of Clinical Biochemistry, The Christie NHS Foundation Trust, Manchester, United Kingdom
- Division of Cancer Sciences, The University of Manchester, Manchester, United Kingdom
| | - C M Cobbaert
- Head of Department of Clinical Chemistry and Laboratory Medicine, Leiden University Medical Center, The Netherlands and Chair of EFLM C-European Regulatory Affairs, the Netherlands
| | - M Reim
- Clinical Operations, Roche Diagnostics International, Rotkreuz, Switzerland
| | - A Tolios
- Department of Blood Group Serology and Transfusion Medicine, Medical University of Vienna, Austria
| | - R Mueller
- Medical Affairs, Abbott Core Diagnostics, Wiesbaden, Germany
| | - P M Bossuyt
- Professor of Clinical Epidemiology, Department of Clinical Epidemiology, Biostatistics & Bioinformatics, Academic Medical Center, University of Amsterdam, the Netherlands
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Bais T, Knol MGE, Xue L, Geertsema P, Vart P, Reichel F, Arjune S, Müller RU, Dekker SEI, Salih M, Meijer E, Gansevoort RT, DIPAK Consortium. Predicting Kidney Outcomes in Autosomal Dominant Polycystic Kidney Disease: A Comprehensive Biomarker Analysis. Clin J Am Soc Nephrol 2025; 20:608-618. [PMID: 40067938 PMCID: PMC12097190 DOI: 10.2215/cjn.0000000680] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Collaborators] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/20/2024] [Accepted: 03/04/2025] [Indexed: 04/06/2025]
Abstract
Key Points Risk prognostication in autosomal dominant polycystic kidney disease can be improved by combining clinical, genetic, and volumetric data. Various biomarkers have been explored in autosomal dominant polycystic kidney disease, but it is unclear which biomarkers are most suitable to integrate into risk stratification tools. Urinary albumin/creatinine, monocyte chemotactic protein-1/creatinine, and serum copeptin are independently associated with kidney outcomes, even in early disease and MIC 1C. Background Risk stratification tools for autosomal dominant polycystic kidney disease (ADPKD) predict kidney outcomes on a group level but lack precision in patients. Methods We assessed the value of adding 13 prognostic biomarkers to established risk factors (sex, age, eGFR, systolic BP, Mayo Imaging Classification [MIC], and mutation type) for predicting disease progression. We included 596 patients from the Developing Intervention Strategies to Halt Progression of ADPKD cohort with ≥2 eGFR measurements and ≥1-year follow-up. Results During a mean±SD follow-up of 5.0±2.3 years, the mean±SD eGFR slope was −3.46±2.5 ml/min per 1.73 m2 per year. Rapid disease progression (eGFR loss ≥3 ml/min per 1.73 m2 per year) occurred in 303 patients (50.8%), and 279 patients (46.8%) reached the combined end point of kidney failure or 30% eGFR decline. Urinary albumin/creatinine, urinary monocyte chemotactic protein-1/creatinine, and serum copeptin consistently and independently predicted eGFR slope (all P < 0.001), rapid disease progression (area under the curve increasing from 0.79 [95% confidence interval (CI), 0.76 to 0.85] for a baseline model to 0.83 [95% CI, 0.81 to 0.88] when monocyte chemotactic protein-1/creatinine and copeptin were included, P = 0.006), and reaching the combined kidney end point (C-index improving from 0.806 [95% CI, 0.78 to 0.84] for a baseline model to 0.82 [95% CI, 0.79 to 0.85] for a model also containing albumin/creatinine and copeptin, P < 0.001). These results were confirmed in an independent external validation cohort (N =144) and were robust in early disease stages and in patients with moderately increased kidney volumes (MIC 1C). Conclusions Our findings suggest that incorporating these biomarkers into ADPKD risk stratification tools will improve risk prediction, even in subgroups where prognostication is most challenging and relevant.
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Affiliation(s)
- Thomas Bais
- Division of Nephrology, Department of Internal Medicine, University Medical Center, University of Groningen, Groningen, The Netherlands
| | - Martine G E Knol
- Division of Nephrology, Department of Internal Medicine, University Medical Center, University of Groningen, Groningen, The Netherlands
| | - Laixi Xue
- Division of Nephrology and Transplantation, Department of Internal Medicine, Erasmus University Medical Center, Rotterdam, The Netherlands
| | - Paul Geertsema
- Division of Nephrology, Department of Internal Medicine, University Medical Center, University of Groningen, Groningen, The Netherlands
| | - Priya Vart
- Department of Clinical Pharmacy and Pharmacology, University Medical Center Groningen, Groningen, The Netherlands
| | - Franz Reichel
- Department II of Internal Medicine, Faculty of Medicine and University Hospital Cologne, University of Cologne, Cologne, Germany
| | - Sita Arjune
- Department II of Internal Medicine, Faculty of Medicine and University Hospital Cologne, University of Cologne, Cologne, Germany
| | - Roman-Ulrich Müller
- Department II of Internal Medicine, Faculty of Medicine and University Hospital Cologne, University of Cologne, Cologne, Germany
| | - Shosha E I Dekker
- Department of Nephrology, Leiden University Medical Center, Leiden, The Netherlands
| | - Mahdi Salih
- Division of Nephrology and Transplantation, Department of Internal Medicine, Erasmus University Medical Center, Rotterdam, The Netherlands
| | - Esther Meijer
- Division of Nephrology, Department of Internal Medicine, University Medical Center, University of Groningen, Groningen, The Netherlands
| | - Ron T Gansevoort
- Division of Nephrology, Department of Internal Medicine, University Medical Center, University of Groningen, Groningen, The Netherlands
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Collaborators
R T Gansevoort, J P H Drenth, D J M Peters, R Zietse, M Salih, S Spijker, M D A van Gastel, T Nijenhuis, O Mayboroda, E Meijer,
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Zhou P, Yang Z, Hao Y, Fan F, Zhao W, Wang Z, Deng Q, Hao Y, Yang N, Han L, Jia P, Qi Y, Zhang Y, Liu J. A hybrid algorithm-based ECG risk prediction model for cardiovascular disease. EUROPEAN HEART JOURNAL. DIGITAL HEALTH 2025; 6:466-475. [PMID: 40395411 PMCID: PMC12088724 DOI: 10.1093/ehjdh/ztaf023] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/04/2024] [Revised: 02/08/2025] [Accepted: 02/21/2025] [Indexed: 05/22/2025]
Abstract
Aims Little is known about the role of electrocardiography (ECG) in the community population independent of physical and laboratory examinations. Thus, this study developed and validated several ECG-based models for cardiovascular disease (CVD) risk assessment, with or without simple questionnaire-based variables. Methods and results Using a derivation cohort of 3734 Chinese participants aged ≥40 years, we developed the ECG-based models to predict the risk of developing CVD (comprising fatal and non-fatal coronary heart disease, unstable angina, stroke, and heart failure). Candidate predictors associated with CVD were screened from hundreds of ECG characteristics using a hybrid algorithm. By incorporating the questionnaire-based predictors, we constructed the ECG-questionnaire model. All models were tested in an external validation cohort (n = 1224) to determine their discrimination and calibration. Over a maximum follow-up of 7 years, 433 CVD events occurred in the derivation cohort. The ECG model with 37 selected features achieved comparable performance concerning the clinical model using traditional cardiovascular risk factors (C-statistic: 0.690, 95% confidence interval [CI]: 0.638-0.743) in the external validation cohort. Such performance significantly improved when the questionnaire-based predictors were added (C-statistic: 0.734, 95% CI: 0.685-0.784; calibration χ2: 3.334, P = 0.950). Compared with the clinical model, 17.4% of the participants were correctly assigned to the corresponding risk groups, with an absolute integrated discrimination index of 0.048 (95% CI: 0.016-0.080). Conclusion The ECG model with/without questionnaire-based variables can accurately predict future CVD risk independent of physical and laboratory examinations, suggesting its great potential in routine clinical practice.
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Affiliation(s)
- Pan Zhou
- Center for Clinical and Epidemiologic Research, Beijing Anzhen Hospital, Capital Medical University, Beijing, China
- Beijing Institute of Heart, Lung and Blood Vessel Diseases, Beijing, China
- National Clinical Research Center for Cardiovascular Diseases, Beijing, China
- The Key Laboratory of Remodeling-Related Cardiovascular Diseases, Ministry of Education, Beijing, China
- The Beijing Municipal Key Laboratory of Clinical Epidemiology, Beijing, China
| | - Zhao Yang
- Center for Clinical and Epidemiologic Research, Beijing Anzhen Hospital, Capital Medical University, Beijing, China
- Beijing Institute of Heart, Lung and Blood Vessel Diseases, Beijing, China
- National Clinical Research Center for Cardiovascular Diseases, Beijing, China
- The Key Laboratory of Remodeling-Related Cardiovascular Diseases, Ministry of Education, Beijing, China
- The Beijing Municipal Key Laboratory of Clinical Epidemiology, Beijing, China
| | - Yiming Hao
- Center for Clinical and Epidemiologic Research, Beijing Anzhen Hospital, Capital Medical University, Beijing, China
- Beijing Institute of Heart, Lung and Blood Vessel Diseases, Beijing, China
- National Clinical Research Center for Cardiovascular Diseases, Beijing, China
- The Key Laboratory of Remodeling-Related Cardiovascular Diseases, Ministry of Education, Beijing, China
- The Beijing Municipal Key Laboratory of Clinical Epidemiology, Beijing, China
| | - Fangfang Fan
- Institute of Cardiovascular Disease, Peking University First Hospital, No.8 Xishiku Road, Xicheng District, Beijing 100034, China
- Department of Cardiology, Peking University First Hospital, No.8 Xishiku Road, Xicheng District, Beijing 100034, China
| | - Wenlang Zhao
- Center for Clinical and Epidemiologic Research, Beijing Anzhen Hospital, Capital Medical University, Beijing, China
- Beijing Institute of Heart, Lung and Blood Vessel Diseases, Beijing, China
- National Clinical Research Center for Cardiovascular Diseases, Beijing, China
- The Key Laboratory of Remodeling-Related Cardiovascular Diseases, Ministry of Education, Beijing, China
- The Beijing Municipal Key Laboratory of Clinical Epidemiology, Beijing, China
| | - Ziyu Wang
- Center for Clinical and Epidemiologic Research, Beijing Anzhen Hospital, Capital Medical University, Beijing, China
- Beijing Institute of Heart, Lung and Blood Vessel Diseases, Beijing, China
- National Clinical Research Center for Cardiovascular Diseases, Beijing, China
- The Key Laboratory of Remodeling-Related Cardiovascular Diseases, Ministry of Education, Beijing, China
- The Beijing Municipal Key Laboratory of Clinical Epidemiology, Beijing, China
| | - Qiuju Deng
- Center for Clinical and Epidemiologic Research, Beijing Anzhen Hospital, Capital Medical University, Beijing, China
- Beijing Institute of Heart, Lung and Blood Vessel Diseases, Beijing, China
- National Clinical Research Center for Cardiovascular Diseases, Beijing, China
- The Key Laboratory of Remodeling-Related Cardiovascular Diseases, Ministry of Education, Beijing, China
- The Beijing Municipal Key Laboratory of Clinical Epidemiology, Beijing, China
| | - Yongchen Hao
- Center for Clinical and Epidemiologic Research, Beijing Anzhen Hospital, Capital Medical University, Beijing, China
- Beijing Institute of Heart, Lung and Blood Vessel Diseases, Beijing, China
- National Clinical Research Center for Cardiovascular Diseases, Beijing, China
- The Key Laboratory of Remodeling-Related Cardiovascular Diseases, Ministry of Education, Beijing, China
- The Beijing Municipal Key Laboratory of Clinical Epidemiology, Beijing, China
| | - Na Yang
- Center for Clinical and Epidemiologic Research, Beijing Anzhen Hospital, Capital Medical University, Beijing, China
- Beijing Institute of Heart, Lung and Blood Vessel Diseases, Beijing, China
- National Clinical Research Center for Cardiovascular Diseases, Beijing, China
- The Key Laboratory of Remodeling-Related Cardiovascular Diseases, Ministry of Education, Beijing, China
- The Beijing Municipal Key Laboratory of Clinical Epidemiology, Beijing, China
| | - Lizhen Han
- Center for Clinical and Epidemiologic Research, Beijing Anzhen Hospital, Capital Medical University, Beijing, China
- Beijing Institute of Heart, Lung and Blood Vessel Diseases, Beijing, China
- National Clinical Research Center for Cardiovascular Diseases, Beijing, China
- The Key Laboratory of Remodeling-Related Cardiovascular Diseases, Ministry of Education, Beijing, China
- The Beijing Municipal Key Laboratory of Clinical Epidemiology, Beijing, China
| | - Pingping Jia
- Center for Clinical and Epidemiologic Research, Beijing Anzhen Hospital, Capital Medical University, Beijing, China
- Beijing Institute of Heart, Lung and Blood Vessel Diseases, Beijing, China
- National Clinical Research Center for Cardiovascular Diseases, Beijing, China
- The Key Laboratory of Remodeling-Related Cardiovascular Diseases, Ministry of Education, Beijing, China
- The Beijing Municipal Key Laboratory of Clinical Epidemiology, Beijing, China
| | - Yue Qi
- Center for Clinical and Epidemiologic Research, Beijing Anzhen Hospital, Capital Medical University, Beijing, China
- Beijing Institute of Heart, Lung and Blood Vessel Diseases, Beijing, China
- National Clinical Research Center for Cardiovascular Diseases, Beijing, China
- The Key Laboratory of Remodeling-Related Cardiovascular Diseases, Ministry of Education, Beijing, China
- The Beijing Municipal Key Laboratory of Clinical Epidemiology, Beijing, China
| | - Yan Zhang
- Institute of Cardiovascular Disease, Peking University First Hospital, No.8 Xishiku Road, Xicheng District, Beijing 100034, China
- Department of Cardiology, Peking University First Hospital, No.8 Xishiku Road, Xicheng District, Beijing 100034, China
| | - Jing Liu
- Center for Clinical and Epidemiologic Research, Beijing Anzhen Hospital, Capital Medical University, Beijing, China
- Beijing Institute of Heart, Lung and Blood Vessel Diseases, Beijing, China
- National Clinical Research Center for Cardiovascular Diseases, Beijing, China
- The Key Laboratory of Remodeling-Related Cardiovascular Diseases, Ministry of Education, Beijing, China
- The Beijing Municipal Key Laboratory of Clinical Epidemiology, Beijing, China
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Araújo CGS, Kunutsor SK, Eijsvogels TMH, Myers J, Laukkanen JA, Hamar D, Niebauer J, Bhattacharjee A, de Souza E Silva CG, Franca JF, Castro CLB. Muscle Power Versus Strength as a Predictor of Mortality in Middle-Aged and Older Men and Women. Mayo Clin Proc 2025:S0025-6196(25)00100-4. [PMID: 40304660 DOI: 10.1016/j.mayocp.2025.02.015] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 12/20/2024] [Revised: 01/21/2025] [Accepted: 02/11/2025] [Indexed: 05/02/2025]
Abstract
OBJECTIVE To assess whether muscle power (force times velocity) outperforms strength as a risk indicator and predictor of mortality. PARTICIPANTS AND METHODS Anthropometric, clinical and vital status, muscle power, and strength data were assessed in 3889 individuals aged 46 to 75 years (2636 [67.8%] men) who were participants in the CLINIMEX Exercise prospective cohort between February 13, 2001, and October 31, 2022. Study participants were stratified by sex and categorized into 4 groups according to the distribution of the results of relative muscle power and strength (adjusted for body weight) measured, respectively, by handgrip and upper row movement tests. RESULTS Death rates were 14.2% (373 of 2636) and 8.9% (111 of 1253) for men and women, respectively, during a median (IQR) follow-up of 10.8 years (6.7 to 15.5 years). In multivariable Cox proportional hazards regression analyses, the hazard ratios (95% CIs) for mortality comparing the lowest vs highest categories of relative muscle power were 5.88 (2.28 to 15.17; P<.001) and 6.90 (1.61 to 29.58; P=.009) for men and women, respectively. The corresponding hazard ratios (95% CIs) for relative strength were 1.62 (0.89 to 2.96; P=.11) and 1.71 (0.61 to 4.80; P=.31), respectively. Sex-specific results of risk prediction analyses revealed that improvements in C index provided by relative power over relative strength were 0.0110 (95% CI, 0.0039 to 0.0182) in men and 0.0112 (95% CI, -0.0040 to 0.0265) in women. CONCLUSION In this large prospective study, relative muscle power was a stronger predictor of mortality than relative strength in middle-aged and older men and women. Evaluating and training muscle power could be of clinical and practical relevance.
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Affiliation(s)
| | - Setor K Kunutsor
- Diabetes Research Centre, University of Leicester, Leicester General Hospital, Leicester, United Kingdom; Section of Cardiology, Department of Internal Medicine, Max Rady College of Medicine, Rady Faculty of Health Sciences, University of Manitoba, Saint Boniface Hospital, Winnipeg, Manitoba, Canada
| | - Thijs M H Eijsvogels
- Department of Medical BioSciences, Exercise Physiology Research Group, Radboud University Medical Center, Nijmegen, The Netherlands
| | - Jonathan Myers
- Division of Cardiology, VA Palo Alto Health Care System and Stanford University, Palo Alto, CA
| | - Jari A Laukkanen
- Institute of Clinical Medicine, Department of Medicine, University of Eastern Finland, Kuopio, Finland; Wellbeing Services County of Central Finland, Department of Medicine, Jyväskylä, Finland
| | | | - Josef Niebauer
- University Institute of Sports Medicine, Prevention and Rehabilitation, Paracelsus University, Salzburg, Austria
| | - Atanu Bhattacharjee
- Division of Population Health and Genomics, School of Medicine, University of Dundee, Dundee, United Kingdom
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25
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Menzaghi C, Marucci A, Mastroianno M, Di Ciaccia G, Armillotta MP, Prehn C, Salvemini L, Mangiacotti D, Adamski J, Fontana A, De Cosmo S, Lamacchia O, Copetti M, Trischitta V. Inflammation and Prediction of Death in Type 2 Diabetes. Evidence of an Intertwined Link With Tryptophan Metabolism. J Clin Endocrinol Metab 2025; 110:e1323-e1333. [PMID: 39193712 PMCID: PMC12012783 DOI: 10.1210/clinem/dgae593] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 05/23/2024] [Revised: 08/06/2024] [Accepted: 08/27/2024] [Indexed: 08/29/2024]
Abstract
CONTEXT The role of inflammation in shaping death risk in diabetes is still unclear. OBJECTIVE To study whether inflammation is associated with and helps predict mortality risk in patients with type 2 diabetes. To explore the intertwined link between inflammation and tryptophan metabolism on death risk. METHODS There were 2 prospective cohorts: the aggregate Gargano Mortality Study (1731 individuals; 872 all-cause deaths) as the discovery sample, and the Foggia Mortality Study (490 individuals; 256 deaths) as validation sample. Twenty-seven inflammatory markers were measured. Causal mediation analysis and in vitro studies were carried out to explore the link between inflammatory markers and the kynurenine to tryptophan ratio (KTR) in shaping mortality risk. RESULTS Using multivariable stepwise Cox regression analysis, interleukin (IL)-4, IL-6, IL-8, IL-13, RANTES, and interferon gamma-induced protein-10 (IP-10) were independently associated with death. An inflammation score (I score) comprising these 6 molecules is strongly associated with death in both the discovery and the validation cohorts HR (95% CI) 2.13 (1.91-2.37) and 2.20 (1.79-2.72), respectively. The I score improved discrimination and reclassification measures (all P < .01) of 2 mortality prediction models based on clinical variables. The causal mediation analysis showed that 28% of the KTR effect on mortality was mediated by IP-10. Studies in cultured endothelial cells showed that 5-methoxy-tryptophan, an anti-inflammatory metabolite derived from tryptophan, reduces the expression of IP-10, thus providing a functional basis for the observed causal mediation. CONCLUSION Adding the I score to clinical prediction models may help identify individuals who are at greater risk of death. Deeply addressing the intertwined relationship between low-grade inflammation and imbalanced tryptophan metabolism in shaping mortality risk may help discover new therapies targeting patients characterized by these abnormalities.
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Affiliation(s)
- Claudia Menzaghi
- Research Unit of Diabetes and Endocrine Diseases, Fondazione Istituto di Ricovero e Cura a Carattere Scientifico “Casa Sollievo della Sofferenza,”71013 San Giovanni Rotondo, Italy
| | - Antonella Marucci
- Research Unit of Diabetes and Endocrine Diseases, Fondazione Istituto di Ricovero e Cura a Carattere Scientifico “Casa Sollievo della Sofferenza,”71013 San Giovanni Rotondo, Italy
| | - Mario Mastroianno
- Scientific Direction, Fondazione Istituto di Ricovero e Cura a Carattere Scientifico “Casa Sollievo della Sofferenza,”71013 San Giovanni Rotondo, Italy
| | - Giulio Di Ciaccia
- Research Unit of Diabetes and Endocrine Diseases, Fondazione Istituto di Ricovero e Cura a Carattere Scientifico “Casa Sollievo della Sofferenza,”71013 San Giovanni Rotondo, Italy
| | - Maria Pia Armillotta
- Research Unit of Diabetes and Endocrine Diseases, Fondazione Istituto di Ricovero e Cura a Carattere Scientifico “Casa Sollievo della Sofferenza,”71013 San Giovanni Rotondo, Italy
| | - Cornelia Prehn
- Metabolomics and Proteomics Core, Helmholtz Zentrum München, German Research Center for Environmental Health, 85764 Neuherberg, Germany
| | - Lucia Salvemini
- Research Unit of Diabetes and Endocrine Diseases, Fondazione Istituto di Ricovero e Cura a Carattere Scientifico “Casa Sollievo della Sofferenza,”71013 San Giovanni Rotondo, Italy
| | - Davide Mangiacotti
- Research Unit of Diabetes and Endocrine Diseases, Fondazione Istituto di Ricovero e Cura a Carattere Scientifico “Casa Sollievo della Sofferenza,”71013 San Giovanni Rotondo, Italy
| | - Jerzy Adamski
- Institute of Experimental Genetics, Helmholtz Zentrum München, German Research Center for Environmental Health, 85764 Neuherberg, Germany
- Department of Biochemistry, Yong Loo Lin School of Medicine, National University of Singapore, Singapore 117597, Singapore
- Institute of Biochemistry, Faculty of Medicine, University of Ljubljana, 1000 Ljubljana, Slovenia
| | - Andrea Fontana
- Biostatistics Unit, Fondazione Istituto di Ricovero e Cura a Carattere Scientifico “Casa Sollievo della Sofferenza,”71013 San Giovanni Rotondo, Italy
| | - Salvatore De Cosmo
- Unit of Internal Medicine, Fondazione Istituto di Ricovero e Cura a Carattere Scientifico “Casa Sollievo della Sofferenza,”71013 San Giovanni Rotondo, Italy
| | - Olga Lamacchia
- Endocrinology Unit, Department of Medical and Surgical Sciences, University of Foggia, 71122 Foggia, Italy
| | - Massimiliano Copetti
- Biostatistics Unit, Fondazione Istituto di Ricovero e Cura a Carattere Scientifico “Casa Sollievo della Sofferenza,”71013 San Giovanni Rotondo, Italy
| | - Vincenzo Trischitta
- Research Unit of Diabetes and Endocrine Diseases, Fondazione Istituto di Ricovero e Cura a Carattere Scientifico “Casa Sollievo della Sofferenza,”71013 San Giovanni Rotondo, Italy
- Department of Experimental Medicine, Sapienza University of Rome, 00185 Rome, Italy
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26
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Kagase A, Yamamoto M, Tokuda T, Kawahata R, Nishio H, Shimura T, Yamaguchi R, Sago M, Izumi Y, Saji M, Asami M, Enta Y, Nakashima M, Shirai S, Izumo M, Mizuno S, Watanabe Y, Amaki M, Kodama K, Yamaguchi J, Naganuma T, Bouta H, Ohno Y, Yamawaki M, Ueno H, Mizutani K, Hachinohe D, Otsuka T, Kubo S, Hayashida K. Plasma volume status predicting clinical outcomes in patients undergoing transcatheter edge-to-edge mitral valve repair. ESC Heart Fail 2025. [PMID: 40241569 DOI: 10.1002/ehf2.15295] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/23/2024] [Revised: 03/05/2025] [Accepted: 03/25/2025] [Indexed: 04/18/2025] Open
Abstract
AIMS Plasma volume status (PVS) is recognized as a marker of systemic congestion, but its clinical utility in patients with mitral regurgitation (MR) undergoing transcatheter edge-to-edge mitral valve repair (M-TEER) has not been well established. This study aimed to evaluate the prognostic significance of PVS in these patients. METHODS AND RESULTS Data from 3763 patients who underwent M-TEER were analysed from a Japanese multicentre registry. Patients were classified into functional MR (FMR) and degenerative MR (DMR) according to MR aetiology, and the median PVS values for each were calculated (FMR 12.7, DMR 14.4). The median value was used as the cut-off, stratifying the cohort into a high PVS group (n = 1882) and a low PVS group (n = 1881). All-cause mortality, cardiovascular death, and heart failure (HF) hospitalization between these two groups were compared up to 3 years in the overall, FMR, and DMR populations. The cumulative incidence rates of all-cause mortality, cardiovascular death, and HF hospitalization were higher in the high PVS group than in the low PVS group (47.0% vs. 22.2%, P < 0.001, 31.6% vs. 13.6%, P < 0.001, and 35.9% vs. 24.7%, P < 0.001, respectively). Similar trends in terms of all-cause mortality, cardiovascular death, and HF hospitalization were observed in the FMR and DMR cohorts (all P < 0.05). In the multivariate Cox regression analysis, the high PVS compared with the low PVS group was independently associated with the increased risk of all-cause death (hazard ratio [HR], 1.02; 95% confidence interval [CI], 1.01-1.03; P < 0.001), cardiovascular death (HR, 1.02; 95% CI, 1.01-1.03, P < 0.001) and HF hospitalization (HR, 1.02; 95% CI, 1.01-1.02, P < 0.001). An independent association between a high PVS and all-cause death, cardiovascular death, and HF hospitalization was also found in FMR and DMR sub-groups (all P < 0.05) while reducing MR severity to moderate or less after M-TEER was associated with improved outcomes in both the high and low PVS groups. CONCLUSIONS Preoperative PVS is a strong independent prognostic marker in patients undergoing M-TEER, correlating with increased risk of mortality and HF hospitalization. PVS may provide valuable clinical insights for patient stratification and management strategies in M-TEER patients.
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Affiliation(s)
- Ai Kagase
- Department of Cardiology, Nagoya Heart Center, Nagoya, Japan
| | - Masanori Yamamoto
- Department of Cardiology, Nagoya Heart Center, Nagoya, Japan
- Department of Cardiology, Toyohashi Heart Center, Toyohashi, Japan
- Department of Cardiology, Gifu Heart Center, Gifu, Japan
| | - Takahiro Tokuda
- Department of Cardiology, Nagoya Heart Center, Nagoya, Japan
| | | | - Hiroto Nishio
- Department of Cardiology, Nagoya Heart Center, Nagoya, Japan
| | | | - Ryo Yamaguchi
- Department of Cardiology, Toyohashi Heart Center, Toyohashi, Japan
| | - Mitsuru Sago
- Department of Cardiology, Toyohashi Heart Center, Toyohashi, Japan
| | - Yuki Izumi
- Department of Cardiology, Sakakibara Heart Institute, Fuchu, Japan
| | - Mike Saji
- Department of Cardiology, Sakakibara Heart Institute, Fuchu, Japan
- Division of Cardiovascular Medicine, Faculty of Medicine, Toho University, Tokyo, Japan
| | - Masahiko Asami
- Division of Cardiology, Mitsui Memorial Hospital, Tokyo, Japan
| | - Yusuke Enta
- Department of Cardiology, Sendai Kosei Hospital, Sendai, Japan
| | | | - Shinichi Shirai
- Division of Cardiology, Kokura Memorial Hospital, Kitakyushu, Japan
| | - Masaki Izumo
- Division of Cardiology, St. Marianna University School of Medicine Hospital, Kawasaki, Japan
| | - Shingo Mizuno
- Department of Cardiology, Shonan Kamakura General Hospital, Kamakura, Japan
| | - Yusuke Watanabe
- Department of Cardiology, School of Medicine, Teikyo University, Tokyo, Japan
| | - Makoto Amaki
- Department of Cardiology, National Cerebral and Cardiovascular Center, Suita, Japan
| | - Kazuhisa Kodama
- Division of Cardiology, Saiseikai Kumamoto Hospital Cardiovascular Center, Kumamoto, Japan
| | - Junichi Yamaguchi
- Department of Cardiology, Tokyo Woman's Medical University, Tokyo, Japan
| | - Toru Naganuma
- Department of Cardiology, New Tokyo Hospital, Chiba, Japan
| | - Hiroki Bouta
- Department of Cardiology, Sapporo Higashi Tokushukai Hospital, Sapporo, Japan
| | - Yohei Ohno
- Department of Cardiology, Tokai University School of Medicine, Isehara, Japan
| | - Masahiro Yamawaki
- Department of Cardiology, Saiseikai Yokohama City Eastern Hospital, Yokohama, Japan
| | - Hiroshi Ueno
- Second Department of Internal Medicine, Toyama University Hospital, Toyama, Japan
| | - Kazuki Mizutani
- Division of Cardiology, Department of Medicine, Faculty of Medicine, Kinki University, Osaka, Japan
| | - Daisuke Hachinohe
- Department of Cardiology, Sapporo Cardiovascular Clinic, Sapporo, Japan
| | - Toshiaki Otsuka
- Department of Hygiene and Public Health, Nippon Medical School, Tokyo, Japan
| | - Shunsuke Kubo
- Department of Cardiology, Kurashiki Central Hospital, Kurashiki, Japan
| | - Kentaro Hayashida
- Department of Cardiology, Keio University School of Medicine, Tokyo, Japan
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27
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Miller HA, Valdes R. Rigorous validation of machine learning in laboratory medicine: guidance toward quality improvement. Crit Rev Clin Lab Sci 2025:1-20. [PMID: 40247648 DOI: 10.1080/10408363.2025.2488842] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/08/2024] [Revised: 01/20/2025] [Accepted: 03/31/2025] [Indexed: 04/19/2025]
Abstract
The application of artificial intelligence (AI) in laboratory medicine will revolutionize predictive modeling using clinical laboratory information. Machine learning (ML), a sub-discipline of AI, involves fitting algorithms to datasets and is broadly used for data-driven predictive modeling in various disciplines. The majority of ML studies reported in systematic reviews lack key aspects of quality assurance. In clinical laboratory medicine, it is important to consider how differences in analytical methodologies, assay calibration, harmonization, pre-analytical errors, interferences, and physiological factors affecting measured analyte concentrations may also affect the downstream robustness and reliability of ML models. In this article, we address the need for quality improvement and proper validation of ML classification models, with the goal of bringing attention to key concepts pertinent to researchers, manuscript reviewers, and journal editors within the field of pathology and laboratory medicine. Several existing predictive modeling guidelines and recommendations can be readily adapted to the development of ML models in laboratory medicine. We summarize a basic overview of ML and key points from current guidelines including advantages and pitfalls of applied ML. In addition, we draw a parallel between validation of clinical assays and ML models in the context of current regulatory frameworks. The importance of classification performance metrics, model explainability, and data quality along with recommendations for strengthening journal submission requirements are also discussed. Although the focus of this article is on the application of ML in laboratory medicine, many of these concepts extend into other areas of medicine and biomedical science as well.
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Affiliation(s)
- Hunter A Miller
- Department of Pathology and Laboratory Medicine, University of Louisville, Louisville, KY, USA
| | - Roland Valdes
- Department of Pathology and Laboratory Medicine, University of Louisville, Louisville, KY, USA
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28
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Ried I, Krinke I, Adolf R, Krönke M, Moosavi SM, Hendrich E, Will A, Bressem K, Hadamitzky M. Incremental diagnostic value of coronary computed tomography angiography derived fractional flow reserve to detect ischemia. Sci Rep 2025; 15:12817. [PMID: 40229396 PMCID: PMC11997107 DOI: 10.1038/s41598-025-95597-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/29/2024] [Accepted: 03/21/2025] [Indexed: 04/16/2025] Open
Abstract
Over the past decade, coronary computed tomographic angiography (CCTA) has been the most robust non-invasive method for evaluating significant coronary stenosis. Thanks to new technologies, it is now possible to determine the fractional flow reserve (FFR) non-invasively using computed tomographic (CT) images. The aim of this work was to evaluate the incremental diagnostic value of CT-derived FFR for ischemia detection. In this retrospective monocentric study, we investigated 421 patients who underwent CCTA and subsequent ischemia testing between 04/2009 and 06/2020. Endpoint was ischemia on a coronary vessel level assessed by CMR (n = 20), SPECT (n = 225), invasive angiography (stenosis ≥ 90%; n = 80) or invasive FFR (positive if ≤ 0.8; n = 96). CT-FFR was derived from CCTA images by a machine learning (ML) based software prototype. Patients averaged 66.5 [58.2-73.6] years of age and 72.7% (n = 306) were male. Overall, 52.5% (n = 221) had hypertension and 67.9% (n = 286) had hypercholesteremia. Logistic regression analysis on a per vessel base showed that the diagnostic model with CT-FFR plus CCTA had significantly better-fit criteria than the diagnostic model with CCTA alone (log-likelihood χ2 230.21 vs. 192.17; p for difference < 0.001). In particular, the area under curve (AUC) by receiver operating characteristics curve (ROC) analysis for CT-FFR plus CCTA (0.87) demonstrated greater discrimination of hemodynamic ischemia compared to CCTA alone (0.83; p for difference < 0.0001). Combined CCTA and CT-FFR have improved diagnostic accuracy compared to CCTA alone in detecting ischemia on the coronary vessel level and thus could reduce the use of invasive coronary angiography in the future.
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Affiliation(s)
- Isabelle Ried
- School of Medicine and Health, Department of Cardiovascular Radiology and Nuclear Medicine, Technical University of Munich, TUM University Hospital, German Heart Center, Lazarettstrasse 36, 80636, Munich, Germany
| | - Insa Krinke
- School of Medicine and Health, Department of Cardiovascular Radiology and Nuclear Medicine, Technical University of Munich, TUM University Hospital, German Heart Center, Lazarettstrasse 36, 80636, Munich, Germany
| | - Rafael Adolf
- School of Medicine and Health, Department of Cardiovascular Radiology and Nuclear Medicine, Technical University of Munich, TUM University Hospital, German Heart Center, Lazarettstrasse 36, 80636, Munich, Germany
| | - Markus Krönke
- School of Medicine and Health, Department of Cardiovascular Radiology and Nuclear Medicine, Technical University of Munich, TUM University Hospital, German Heart Center, Lazarettstrasse 36, 80636, Munich, Germany
| | - Seyed Mahdi Moosavi
- School of Medicine and Health, Department of Cardiovascular Radiology and Nuclear Medicine, Technical University of Munich, TUM University Hospital, German Heart Center, Lazarettstrasse 36, 80636, Munich, Germany
| | - Eva Hendrich
- School of Medicine and Health, Department of Cardiovascular Radiology and Nuclear Medicine, Technical University of Munich, TUM University Hospital, German Heart Center, Lazarettstrasse 36, 80636, Munich, Germany
| | - Albrecht Will
- School of Medicine and Health, Department of Cardiovascular Radiology and Nuclear Medicine, Technical University of Munich, TUM University Hospital, German Heart Center, Lazarettstrasse 36, 80636, Munich, Germany
| | - Keno Bressem
- School of Medicine and Health, Department of Cardiovascular Radiology and Nuclear Medicine, Technical University of Munich, TUM University Hospital, German Heart Center, Lazarettstrasse 36, 80636, Munich, Germany
| | - Martin Hadamitzky
- School of Medicine and Health, Department of Cardiovascular Radiology and Nuclear Medicine, Technical University of Munich, TUM University Hospital, German Heart Center, Lazarettstrasse 36, 80636, Munich, Germany.
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Cao X, Jiang M, Guan Y, Li S, Duan C, Gong Y, Kong Y, Shao Z, Wu H, Yao X, Li B, Wang M, Xu H, Hao X. Trans-ancestry GWAS identifies 59 loci and improves risk prediction and fine-mapping for kidney stone disease. Nat Commun 2025; 16:3473. [PMID: 40216741 PMCID: PMC11992175 DOI: 10.1038/s41467-025-58782-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/31/2024] [Accepted: 03/27/2025] [Indexed: 04/14/2025] Open
Abstract
Kidney stone disease is a multifactorial disease with increasing incidence worldwide. Trans-ancestry GWAS has become a popular strategy to dissect genetic structure of complex traits. Here, we conduct a large trans-ancestry GWAS meta-analysis on kidney stone disease with 31,715 cases and 943,655 controls in European and East Asian populations. We identify 59 kidney stone disease susceptibility loci, including 13 novel loci and show similar effects across populations. Using fine-mapping, we detect 1612 variants at these loci, and pinpoint 25 causal signals with a posterior inclusion probability >0.5 among them. At a novel locus, we pinpoint TRIOBP gene and discuss its potential link to kidney stone disease. We show that a cross-population polygenic risk score, PRS-CSxEAS&EUR, exhibits superior predictive performance for kidney stone disease than other polygenic risk scores constructed in our study. Relative to individuals in the third quintile of PRS-CSxEAS&EUR, those in the lowest and highest quintiles exhibit distinct kidney stone disease risks with odds ratios of 0.57 (0.51-0.63) and 1.83 (1.68-1.98), respectively. Our results suggest that kidney stone disease patients with higher polygenic risk scores are younger at onset. In summary, our study advances the understanding of kidney stone disease genetic architecture and improves its genetic predictability.
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Affiliation(s)
- Xi Cao
- Department of Epidemiology and Biostatistics, School of Public Health, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, Hubei, China
| | - Minghui Jiang
- Department of Neurology; Center of excellence for Omics Research (CORe), Beijing Tiantan Hospital, Capital Medical University; China National Clinical Research Center for Neurological Diseases, Beijing, China
| | - Yunlong Guan
- Department of Epidemiology and Biostatistics, School of Public Health, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, Hubei, China
| | - Si Li
- Department of Epidemiology and Biostatistics, School of Public Health, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, Hubei, China
| | - Chen Duan
- Department of Urology, Tumor Precision Diagnosis and Treatment Technology and Translational Medicine, Hubei Engineering Research Center, Zhongnan Hospital of Wuhan University, Wuhan, China
| | - Yan Gong
- Department of Urology, Tumor Precision Diagnosis and Treatment Technology and Translational Medicine, Hubei Engineering Research Center, Zhongnan Hospital of Wuhan University, Wuhan, China
| | - Yifan Kong
- Department of Epidemiology and Biostatistics, School of Public Health, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, Hubei, China
| | - Zhonghe Shao
- Department of Epidemiology and Biostatistics, School of Public Health, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, Hubei, China
| | - Hongji Wu
- Department of Epidemiology and Biostatistics, School of Public Health, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, Hubei, China
| | - Xiangyang Yao
- Department of Urology, Tumor Precision Diagnosis and Treatment Technology and Translational Medicine, Hubei Engineering Research Center, Zhongnan Hospital of Wuhan University, Wuhan, China
| | - Bo Li
- Department of Urology, Tumor Precision Diagnosis and Treatment Technology and Translational Medicine, Hubei Engineering Research Center, Zhongnan Hospital of Wuhan University, Wuhan, China
| | - Miao Wang
- Department of Urology, Union Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, China.
| | - Hua Xu
- Department of Urology, Tumor Precision Diagnosis and Treatment Technology and Translational Medicine, Hubei Engineering Research Center, Zhongnan Hospital of Wuhan University, Wuhan, China.
- Taikang Center for Life and Medical Sciences, Wuhan University, Wuhan, Hubei, China.
| | - Xingjie Hao
- Department of Epidemiology and Biostatistics, School of Public Health, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, Hubei, China.
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Wang Z, Kedhi E, Liu X, Li C, Huang J, Zhong J, Qu X, Wijns W, Tu S. Prognostic Implications of Angiographically Derived Coronary Radial Wall Strain in Diabetic Patients and Non-Flow-Limiting Stenosis. JACC Cardiovasc Interv 2025:S1936-8798(25)00791-5. [PMID: 40347200 DOI: 10.1016/j.jcin.2025.02.009] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 10/03/2024] [Revised: 02/07/2025] [Accepted: 02/19/2025] [Indexed: 05/12/2025]
Abstract
BACKGROUND Coronary radial wall strain (RWS) represents a novel approach enabling discrimination of vulnerable plaques with prognostic significance. OBJECTIVES This study sought to evaluate the prognostic impact of RWS in diabetic patients with non-flow-limiting coronary stenosis when compared with optical coherence tomography-detected vulnerability features (OCT-VFs). METHODS This was a post hoc analysis of the COMBINE OCT-FFR dataset. The primary endpoint was lesion-oriented composite endpoint (LOCE), a composite of cardiac death, target vessel-related myocardial infarction, and clinically driven target lesion revascularization. RESULTS RWS was assessed in 435 eligible non-flow-limiting lesions from 366 patients. Lesion-level maximal RWS was predictive of lesions with any OCT-VFs (area under the curve: 0.630 [95% CI: 0.571-0.688]; P < 0.001). The median follow-up was 3.2 years (Q1-Q3: 2.2-4.1 years). With a prespecified cutoff of ≥13.0%, the incidence of LOCE was 17.0% (15/88; 95% CI: 9.0%-25.1%) in RWS-positive vs 6.8% (19/278; 95% CI: 3.8%-9.8%) in RWS-negative patients (HR: 2.70; 95% CI: 1.37-5.32; P = 0.004). Positive RWS predicted LOCE independently from any OCT-VFs (direct effect β = 0.099 [95% CI: 0.029-0.168]; P = 0.006; indirect effect β = 0.004 [95% CI: -0.008 to 0.015]; P = 0.555; mediation proportion 3.9% [95% CI: -5.0% to 20.3%]). Adding RWS to any OCT-VFs mainly improved the reclassification for LOCE in the lower-risk strata (positive continuous net reclassification improvement [cNRI] -0.060 [95% CI: -0.420 to 0.318]; P = 0.749; negative cNRI 0.583 [95% CI: 0.474-0.681]; P < 0.001; integrated discrimination improvement 0.066 [95% CI: 0.013-0.182]; P = 0.010). CONCLUSIONS In diabetic patients with non-flow-limiting stenosis, RWS can help to localize stenoses with OCT-VFs. RWS predicts increased risk for LOCE, both independently from-and incrementally beyond-OCT-VFs. (Combined Optical Coherence Tomography Morphologic and Fractional Flow Reserve Hemodynamic Assessment of Non-Culprit Lesions to Better Predict Adverse Event Outcomes in Diabetes Mellitus Patients [COMBINE OCT-FFR]; NCT02989740).
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Affiliation(s)
- Zhiqing Wang
- Department of Cardiology, Huadong Hospital, Fudan University, Shanghai, China; Biomedical Instrument Institute, School of Biomedical Engineering, Shanghai Jiao Tong University, Shanghai, China
| | - Elvin Kedhi
- Division of Cardiology and Structural Heart Diseases, Medical University of Silesia, Katowice, Poland; Department of Interventional Cardiology, Royal Victoria Hospital, McGill University Health Center, McGill University, Montreal, Quebec, Canada
| | - Xun Liu
- Biomedical Instrument Institute, School of Biomedical Engineering, Shanghai Jiao Tong University, Shanghai, China
| | - Chunming Li
- Biomedical Instrument Institute, School of Biomedical Engineering, Shanghai Jiao Tong University, Shanghai, China
| | - Jiayue Huang
- Biomedical Instrument Institute, School of Biomedical Engineering, Shanghai Jiao Tong University, Shanghai, China
| | - Jiaxin Zhong
- Department of Cardiology, Fujian Medical University Union Hospital, Fuzhou, China
| | - Xinkai Qu
- Department of Cardiology, Huadong Hospital, Fudan University, Shanghai, China.
| | - William Wijns
- The Lambe Institute for Translational Medicine and Curam, University of Galway, Galway, Ireland
| | - Shengxian Tu
- Department of Cardiology, Huadong Hospital, Fudan University, Shanghai, China; Biomedical Instrument Institute, School of Biomedical Engineering, Shanghai Jiao Tong University, Shanghai, China.
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Sánchez-Bacaicoa C, Rico-Martin S, Costo-Muriel C, Ortega-Collazos E, Sánchez-Lozano M, Sánchez-Bacaicoa M, Galán-González J, Calderón-García JF, Muñoz-Torrero JFS. Carotid Plaque-Burden scale and outcomes: A real-life study. Med Clin (Barc) 2025; 164:325-333. [PMID: 39617687 DOI: 10.1016/j.medcli.2024.10.009] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/04/2024] [Revised: 10/10/2024] [Accepted: 10/14/2024] [Indexed: 04/06/2025]
Abstract
BACKGROUND The value of carotid ultrasound in real-world practice remains controversial. We investigated the outcomes of people with vascular risk factors according to an easy carotid-plaque burden scale (CPB-scale). Predictive yield of the addition CPB-scale to ESC-SCORE2 (CPB-SCORE2 table) was assessed. METHODS A cohort of participants without preexisting cardiovascular disease (CVD) was evaluated for clinical outcomes according to the number of plaques by segment. The usefulness of the CPB-SCORE2 table was investigated. RESULTS A total of 1004 patients were followed for a mean of 12.5 years for major adverse cardiovascular events (MACEs) and death. The CPB-scale was independently associated with MACEs; compared to those in the low-risk group, the corresponding adjusted hazard ratios (95% confidence intervals) for MACEs among the intermediate and high-risk groups were 13.1 (4.87-35.5) and 19.4 (7.27-51.9), respectively. Similarly, the risk of death was greater for participants stratified as high-risk than for those in the low-risk group (adjusted HR 3.36 [1.58-7.15]). According to our CPB-SCORE2 table, 149 of 178 (84%) CV events were detected in the high-risk group and exhibited greater sensitivity than did the SCORE2 Table, 84%; vs. 62%; but slightly less specificity, 62%; vs. 68%. Our table shows the improved performance of SCORE2; c-statistics: 0.74 vs. 0.68; p<0.001 for net reclassification index and integrated discrimination index. CONCLUSIONS A simple prognostic CPB-scale was strongly associated with the long-term risk of developing a first MACE and all-cause death. Adding the CPB-scale to the SCORE2 may improve risk prediction with easy applicability in clinical practice.
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Affiliation(s)
| | - Sergio Rico-Martin
- Department of Nursing, Nursing and Occupational Therapy College, University of Extremadura, Cáceres, Spain.
| | - Clara Costo-Muriel
- Internal Medicine Department Hospital de La Axarquía, Velez-Malaga, Spain
| | | | - Marta Sánchez-Lozano
- Internal Medicine Department Interna, Hospital San Pedro de Alcántara de Cáceres, Spain
| | | | - Javier Galán-González
- Internal Medicine Department Interna, Hospital San Pedro de Alcántara de Cáceres, Spain
| | - Julián F Calderón-García
- Department of Nursing, Nursing and Occupational Therapy College, University of Extremadura, Cáceres, Spain
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Więckowska B, Kubiak KB, Guzik P. Evaluating the three-level approach of the U-smile method for imbalanced binary classification. PLoS One 2025; 20:e0321661. [PMID: 40208902 PMCID: PMC11984743 DOI: 10.1371/journal.pone.0321661] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/05/2024] [Accepted: 03/09/2025] [Indexed: 04/12/2025] Open
Abstract
Real-life binary classification problems often involve imbalanced datasets, where the majority class outnumbers the minority class. We previously developed the U-smile method, which comprises the U-smile plot and the BA, RB and I coefficients, to assess the usefulness of a new variable added to a reference prediction model and validated it under class balance. In this study, we evaluated the U-smile method under class imbalance, proposed a three-level approach of the U-smile method, and used the I coefficients as a weighting factor for point size in the U-smile plots of the BA and RB coefficients. Using real data from the Heart Disease dataset and generated random variables, we built logistic regression models to assess four new variables added to the reference model (nested setting). These models were evaluated at seven pre-defined imbalance levels of 1%, 10%, 30%, 50%, 70%, 90% and 99% of the event class. The results of the U-smile method were compared to those of certain traditional measures: Brier skill score, net reclassification index, difference in F1-score, difference in Matthews correlation coefficient, difference in the area under the receiver operating characteristic curve of the new and reference models, and the likelihood-ratio test. The reference model overfitted to the majority class at higher imbalance levels. The BA-RB-I coefficients of the U-smile method identified informative variables across the entire imbalance range. At higher imbalance levels, the U-smile method indicated both prediction improvement in the minority class (positive BA and I coefficients) and reduction in overfitting to the majority class (negative RB coefficients). The U-smile method outperformed traditional evaluation measures across most of the imbalance range. It proved highly effective in variable selection for imbalanced binary classification, making it a useful tool for real-life problems, where imbalanced datasets are prevalent.
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Affiliation(s)
- Barbara Więckowska
- Department of Computer Science and Statistics, Poznan University of Medical Sciences, Poznan, Poland
| | - Katarzyna B. Kubiak
- Department of Computer Science and Statistics, Poznan University of Medical Sciences, Poznan, Poland
| | - Przemysław Guzik
- Department of Cardiology - Intensive Therapy and Internal Medicine, Poznan University of Medical Sciences, Poznan, Poland
- University Centre for Sports and Medical Studies, Poznan University of Medical Sciences, Poznan, Poland
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Zhou Y, Hu J. The association between pan-immune-inflammation value with mortality in critically ill patients with sepsis-associated acute kidney injury. BMC Infect Dis 2025; 25:486. [PMID: 40205347 PMCID: PMC11980289 DOI: 10.1186/s12879-025-10880-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2025] [Accepted: 04/01/2025] [Indexed: 04/11/2025] Open
Abstract
BACKGROUND Sepsis-associated acute kidney injury (SA-AKI) significantly impacts global health. Early identification of SA-AKI patients at inflammatory and immune risk, followed by timely interventions, is critical for improving outcomes. The pan-immune-inflammation value (PIV) reflects systemic inflammation and immune status. However, its prognostic value in SA-AKI remains unexplored. METHODS This retrospective cohort study analyzed SA-AKI patients in the MIMIC-IV database. Cox regression assessed the association between PIV and mortality, while restricted cubic spline (RCS) regression explored the relationship between PIV and 30-day and 365-day mortality. RESULTS A total of 2,473 SA-AKI patients in our study were categorized into PIV quartiles: T1 (≤ 214), T2 (214-679), T3 (679-2,039), and T4 (> 2,039). PIV showed a nonlinear association with mortality. Higher PIV quartiles were linked to increased mortality, with 30-day rates of 26%, 22%, 35%, and 41% (P < 0.001) and 365-day mortality rates of 34%, 31%, 46%, and 54% (P < 0.001). Adjusted hazard ratios (HR) for 30-day mortality across quartiles were 1.00 (reference), 1.04(0.82, 1.31), 1.54 (1.25, 1.9), and 1.62 (1.32, 1.98), respectively. For 365-day mortality, the HR and 95% CI were 1.00 (reference), 1.06 (0.87, 1.30), 1.58 (1.32, 1.90), and 1.70 (1.42, 2.03). After adding PIV to SOFA score, the integrated discrimination improvement (IDI) for 30-day mortality was 0.005, and the net reclassification improvement (NRI) was 0.103. For 365-day mortality, the IDI was 0.009, and the NRI was 0.124. Regarding the APACHE II score, the IDI for 30-day mortality was 0.003, and the NRI was 0.081. For 365-day mortality, the IDI was 0.006, and the NRI was 0.107. CONCLUSION Elevated PIV independently predicts both short- and long-term adverse outcomes in SA-AKI patients. Incorporating PIV into established critical illness prediction models, such as SOFA and APACHE II, enhances their prognostic accuracy.
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Affiliation(s)
- Yidan Zhou
- Department of Emergency Medicine, Hangzhou Third People's Hospital, Hangzhou, China
| | - Jingjing Hu
- Department of Emergency Medicine, Hangzhou Third People's Hospital, Hangzhou, China.
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Enserro DM, Miller A. Improving the Estimation of Prediction Increment Measures in Logistic and Survival Analysis. Cancers (Basel) 2025; 17:1259. [PMID: 40282435 PMCID: PMC12025450 DOI: 10.3390/cancers17081259] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/11/2025] [Revised: 04/02/2025] [Accepted: 04/07/2025] [Indexed: 04/29/2025] Open
Abstract
Background/Objectives: Proper confidence interval estimation of the area under the receiver operating characteristic curve (AUC), the net reclassification index (NRI), and the integrated discrimination improvement (IDI) is an area of ongoing research. The most common confidence interval estimation methods employ asymptotic theory. However, developments demonstrate that degeneration of the normal distribution assumption under the null hypothesis exists for measures such as the change in AUC (ΔAUC) and IDI, and confidence intervals estimated under the normal distribution assumption may be invalid. We aim to study the performance of confidence intervals derived assuming asymptotic theory and those derived with non-parametric bootstrapping methods. Methods: We examine the performance of ΔAUC, NRI, and IDI in both the logistic and survival regression context. We explore empirical distributions and compare coverage probabilities of asymptotic confidence intervals with those produced from bootstrapping methods through simulation. Results: The primary finding in both the logistic framework and the survival analysis framework is that the percentile CIs performed well regarding coverage, without compromise to their width; this finding was robust in most scenarios. Conclusions: Our results suggest that the asymptotic intervals are only appropriate when a strong effect size of the added parameter exists, and that the percentile bootstrap interval exhibits at least a reasonable coverage while maintaining the shortest width in nearly all simulated scenarios, making this interval the most reliable choice. The intent is that these recommendations improve the accuracy in the estimation and the overall assessment of discrimination improvement.
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Affiliation(s)
- Danielle M. Enserro
- Department of Biostatistics and Bioinformatics, Roswell Park Comprehensive Cancer Center, Buffalo, NY 14263, USA;
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Menzaghi C, Copetti M, Mantzoros CS, Trischitta V. Prediction models for the implementation of precision medicine in the real world. Some critical issues. Metabolism 2025:156257. [PMID: 40187402 DOI: 10.1016/j.metabol.2025.156257] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 03/31/2025] [Accepted: 03/31/2025] [Indexed: 04/07/2025]
Affiliation(s)
- Claudia Menzaghi
- Research Unit of Diabetes and Endocrine Diseases, Fondazione Istituto di Ricovero e Cura a Carattere Scientifico "Casa Sollievo della Sofferenza", 71013 San Giovanni Rotondo, Italy
| | - Massimiliano Copetti
- Unit of Biostatistics, Fondazione Istituto di Ricovero e Cura a Carattere Scientifico "Casa Sollievo della Sofferenza", 71013 San Giovanni Rotondo, Italy
| | - Christos S Mantzoros
- Department of Medicine, Beth Israel Deaconess Medical Center, Harvard Medical School, Boston, MA 02215, USA
| | - Vincenzo Trischitta
- Research Unit of Diabetes and Endocrine Diseases, Fondazione Istituto di Ricovero e Cura a Carattere Scientifico "Casa Sollievo della Sofferenza", 71013 San Giovanni Rotondo, Italy.
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Sun Y, Wen L, Xiang W, Luo X, Chen L, Yang X, Yang Y, Zhang Y, Yu S, Xiao H, Yu X. Added value of pretreatment CT-based Node-RADS score for predicting survival outcome of locally advanced gastric cancer: compared with clinical N stage. BMC Cancer 2025; 25:598. [PMID: 40175964 PMCID: PMC11966910 DOI: 10.1186/s12885-025-14032-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/13/2025] [Accepted: 03/27/2025] [Indexed: 04/04/2025] Open
Abstract
OBJECTIVES The Node Reporting and Data System (Node-RADS) offers a reliable framework for lymph node assessment, but its prognostic significance remains unexplored. This study aims to investigate the added prognostic value of Node-RADS in patients with locally advanced gastric cancer (LAGC) undergoing neoadjuvant chemotherapy (NAC) followed by gastrectomy. MATERIALS AND METHODS This single-center retrospective study included 118 patients with LAGC underwent NAC and gastrectomy. The maximum Node-RADS score and the number of metastatic lymph node stations (defined as LNM-Station) were evaluated on pretreatment CT. The pretreatment Node-RADS-CT and Node-RADS-integrated models were developed using Cox regression to predict overall survival (OS) and disease-free survival (DFS). The pretreatment cN-CT models, cN-integrated models, as well as post-NAC pathological models were also developed in comparison. The performance of the models was assessed in terms of discrimination, calibration and clinical applicability. RESULTS The LNM-Station was significantly associated with OS and DFS (all p < 0.05). The Node-RADS-CT model showed higher Harrell's consistency index (C-index) than cN-CT model (0.755 vs. 0.693 for OS, p = 0.017; 0.759 vs. 0.706 for DFS, p = 0.018). The Node-RADS-integrated model also achieved higher C-index than cN-integrated model (0.771 vs. 0.731 for OS, p = 0.091; 0.773 vs. 0.733 for DFS, p = 0.053). The net reclassification improvement (NRI) of the Node-RADS-integrated model at 5 years was 0.379 for OS and 0.364 for DFS (all p < 0.05). The integrated discrimination improvement (IDI) of the Node-RADS-integrated model was 0.103 for OS and 0.107 for DFS (all p < 0.05). The C-indices (OS: 0.745; DFS: 0.746) of pathological models were slightly lower than those of Node-RADS-based models (all p > 0.05). CONCLUSION The baseline Node-RADS score and LNM-Station were effective prognostic indicators for LAGC. The pretreatment CT Node-RADS-based models can offer added prognostic value for LAGC, compared with clinical N stage.
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Affiliation(s)
- Yan Sun
- Department of Diagnostic Radiology, The Affiliated Cancer Hospital of Xiangya School of Medicine, Central South University/Hunan Cancer Hospital, Changsha, China
- Graduate Collaborative Training Base of Hunan Cancer Hospital, Hengyang Medical School, University of South China, Changsha, China
| | - Lu Wen
- Department of Diagnostic Radiology, The Affiliated Cancer Hospital of Xiangya School of Medicine, Central South University/Hunan Cancer Hospital, Changsha, China
| | - Wang Xiang
- Department of Diagnostic Radiology, The Affiliated Cancer Hospital of Xiangya School of Medicine, Central South University/Hunan Cancer Hospital, Changsha, China
| | - Xiangtong Luo
- Department of Radiotherapy Technology, The Affiliated Cancer Hospital of Xiangya School of Medicine, Central South University/Hunan Cancer Hospital, Changsha, China
| | - Lian Chen
- Department of Diagnostic Radiology, The Affiliated Cancer Hospital of Xiangya School of Medicine, Central South University/Hunan Cancer Hospital, Changsha, China
| | - Xiaohuang Yang
- Department of Diagnostic Radiology, The Affiliated Cancer Hospital of Xiangya School of Medicine, Central South University/Hunan Cancer Hospital, Changsha, China
| | - Yanhui Yang
- Department of Diagnostic Radiology, The Affiliated Cancer Hospital of Xiangya School of Medicine, Central South University/Hunan Cancer Hospital, Changsha, China
- Graduate Collaborative Training Base of Hunan Cancer Hospital, Hengyang Medical School, University of South China, Changsha, China
| | - Yi Zhang
- Department of Diagnostic Radiology, The Affiliated Cancer Hospital of Xiangya School of Medicine, Central South University/Hunan Cancer Hospital, Changsha, China
- Graduate Collaborative Training Base of Hunan Cancer Hospital, Hengyang Medical School, University of South China, Changsha, China
| | - Sanqiang Yu
- Norman Bethune Health Science Center of Jilin University, Changsha, China
| | - Hua Xiao
- Department of Hepatobiliary and Intestinal Surgery, The Affiliated Cancer Hospital of Xiangya School of Medicine, Central South University/Hunan Cancer Hospital, Changsha, China.
- Department of Gastroduodenal and Pancreatic Surgery, The Affiliated Cancer Hospital of Xiangya School of Medicine, Central South University/Hunan Cancer Hospital, Changsha, China.
| | - Xiaoping Yu
- Department of Diagnostic Radiology, The Affiliated Cancer Hospital of Xiangya School of Medicine, Central South University/Hunan Cancer Hospital, Changsha, China.
- Graduate Collaborative Training Base of Hunan Cancer Hospital, Hengyang Medical School, University of South China, Changsha, China.
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Huang Z, Buddhiraju A, Chen TLW, RezazadehSaatlou M, Chen SF, Bacevich BM, Xiao P, Kwon YM. Machine learning models based on a national-scale cohort accurately identify patients at high risk of deep vein thrombosis following primary total hip arthroplasty. Orthop Traumatol Surg Res 2025:104238. [PMID: 40185200 DOI: 10.1016/j.otsr.2025.104238] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 10/17/2024] [Revised: 02/20/2025] [Accepted: 04/01/2025] [Indexed: 04/07/2025]
Abstract
BACKGROUND The occurrence of deep venous thrombosis (DVT) following total hip arthroplasty (THA) poses a substantial risk of morbidity and mortality, highlighting the need for preoperative risk stratification and prophylaxis initiatives. However, there exists a paucity of big-data-driven predictive models for DVT risk following elective hip arthroplasty. Therefore, this study aimed to develop and assess machine learning (ML) models in predicting DVT risk following THA using a national patient cohort. HYPOTHESIS We hypothesized that machine learning models would accurately predict patient-specific DVT risk in patients undergoing elective total hip arthroplasty. PATIENTS AND METHODS The ACS-NSQIP national database was queried to identify 70,733 THA patients from 2013 to 2020, including 317 patients (0.45%) with DVT. Artificial neural network, random forest, histogram-based gradient boosting, k-nearest neighbor, and support vector machine algorithms were trained and utilized to predict the risk of DVT following THA. Model performance was assessed using discrimination, calibration, and potential clinical utility. RESULTS Histogram-based gradient boosting demonstrated the best prediction performance with an area under the receiver operating curve of 0.93 (discrimination), a slope of 0.92 (closely aligned with actual outcomes), an intercept of 0.18 (minimal prediction bias), and a Brier score of 0.010 (high accuracy). The model also demonstrated clinical utility with greater net benefit than alternative decision criteria in the decision curve analysis. Length of stay, international normalized ratio, age, and partial thromboplastin time were the strongest predictors of DVT after primary THA. DISCUSSION Machine learning models demonstrated excellent predictive performance in terms of discrimination, calibration, and decision curve analysis. Further research is warranted in terms of external validation to realize the potential of these algorithms as a valuable adjunct tool for risk stratification in patients undergoing THA. LEVEL OF EVIDENCE III; Retrospective study.
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Affiliation(s)
- Ziwei Huang
- Bioengineering Laboratory, Department of Orthopaedic Surgery, Massachusetts General Hospital, Harvard Medical School, Boston, MA, United States
| | - Anirudh Buddhiraju
- Bioengineering Laboratory, Department of Orthopaedic Surgery, Massachusetts General Hospital, Harvard Medical School, Boston, MA, United States
| | - Tony Lin-Wei Chen
- Bioengineering Laboratory, Department of Orthopaedic Surgery, Massachusetts General Hospital, Harvard Medical School, Boston, MA, United States
| | - MohammadAmin RezazadehSaatlou
- Bioengineering Laboratory, Department of Orthopaedic Surgery, Massachusetts General Hospital, Harvard Medical School, Boston, MA, United States
| | - Shane Fei Chen
- Bioengineering Laboratory, Department of Orthopaedic Surgery, Massachusetts General Hospital, Harvard Medical School, Boston, MA, United States
| | - Blake M Bacevich
- Bioengineering Laboratory, Department of Orthopaedic Surgery, Massachusetts General Hospital, Harvard Medical School, Boston, MA, United States
| | - Pengwei Xiao
- Bioengineering Laboratory, Department of Orthopaedic Surgery, Massachusetts General Hospital, Harvard Medical School, Boston, MA, United States
| | - Young-Min Kwon
- Bioengineering Laboratory, Department of Orthopaedic Surgery, Massachusetts General Hospital, Harvard Medical School, Boston, MA, United States.
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Ding G, Li K. A CT-Based Clinical-Radiomics Nomogram for Predicting the Overall Survival to TACE Combined with Camrelizumab and Apatinib in Patients with Advanced Hepatocellular Carcinoma. Acad Radiol 2025; 32:1993-2004. [PMID: 39578199 DOI: 10.1016/j.acra.2024.10.052] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/23/2024] [Revised: 10/16/2024] [Accepted: 10/30/2024] [Indexed: 11/24/2024]
Abstract
RATIONALE AND OBJECTIVES To construct a computed tomography (CT)-based clinical-radiomics nomogram for estimating overall survival (OS) in advanced hepatocellular carcinoma (HCC) patients receiving transcatheter arterial chemoembolization (TACE) in combination with camrelizumab and apatinib. METHODS A retrospective recruitment of 150 patients with clinically or pathologically confirmed HCC was conducted, followed by their division into training cohort (n = 105) and test cohort (n = 45). To generate the radiomics score (Rad-score), a series of analyses were performed, including Pearson correlation analysis, univariate Cox analysis, and least absolute shrinkage and selection operator Cox regression analysis. Subsequently, a clinical-radiomics nomogram was constructed using the Rad-score combined with independent clinical prognostic factors, followed by assessments of its calibration, discrimination, reclassification, and clinical utility. RESULTS Five CT radiomics features were selected. The Rad-score showed a significant correlation with OS (P < 0.001). The clinical-radiomics nomogram demonstrated superior performance in estimating OS, with a concordance index (C-index) of 0.840, compared to the radiomics nomogram (C-index: 0.817) and the clinical nomogram (C-index: 0.661). It also exhibited high 1-year and 2-year area under the curves of 0.936 and 0.946, respectively. Additionally, the clinical-radiomics nomogram markedly enhanced classification accuracy for OS outcomes, as evidenced by net reclassification improvement and integrated discrimination improvement. Decision curve analysis confirmed its clinical utility. CONCLUSION A CT-based clinical-radiomics nomogram exhibits strong potential for predicting OS in advanced HCC patients undergoing TACE combined with camrelizumab and apatinib.
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Affiliation(s)
- Guangyao Ding
- Department of General Surgery, Hefei BOE Hospital, Hefei, Anhui, China
| | - Kailang Li
- Department of General Surgery, Hefei BOE Hospital, Hefei, Anhui, China.
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He Y, Chang X, Liu Y, Fei J, Qin X, Song B, Yu Q, Yang P, Shi M, Guo D, Peng Y, Chen J, Wang A, Xu T, He J, Zhang Y, Zhu Z. Plasma polyamines levels and post-stroke depression in ischemic stroke patients: A multicenter prospective study. Atherosclerosis 2025; 403:119150. [PMID: 40043446 DOI: 10.1016/j.atherosclerosis.2025.119150] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 09/30/2024] [Revised: 02/17/2025] [Accepted: 02/19/2025] [Indexed: 04/20/2025]
Abstract
BACKGROUND AND AIMS Polyamines have been suggested to implicated in inflammation, ischemic stroke, and mental disorders, but the associations of polyamines with post-stroke depression (PSD) remain unclear. We aimed to prospectively investigate the associations of plasma putrescine, spermidine and spermine with PSD among ischemic stroke patients in a multicenter cohort study. METHODS We measured plasma putrescine, spermidine and spermine levels at baseline among 635 ischemic stroke patients from a preplanned ancillary study of the CATIS (China Antihypertensive Trial in Acute Ischemic Stroke). The study outcome was depression (Hamilton Depression Rating Scale score ≥8) at 3-month follow-up after ischemic stroke. RESULTS Plasma putrescine and spermidine were positively associated with the risk of PSD. The adjusted odds ratios of PSD for the highest versus lowest tertile of putrescine and spermidine were 1.77 (95 % CI, 1.13-2.78; ptrend = 0.014) and 1.77 (95 % CI, 1.11-2.82; ptrend = 0.013), respectively. Multivariable-adjusted spline regression analyses showed linear associations of plasma putrescine (p = 0.002 for linearity) and spermidine (p = 0.008 for linearity) with PSD. In addition, plasma putrescine (continuous net reclassification improvement [NRI]: 26.33 %, p = 0.002; integrated discrimination improvement [IDI]: 1.06 %, p = 0.009) and spermidine (continuous NRI: 20.72 %, p = 0.013; IDI: 1.04 %, p = 0.010) could significantly improve the risk reclassification of PSD beyond the established risk factors. CONCLUSIONS High plasma putrescine and spermidine levels were associated with increased risk of PSD among ischemic stroke patients. Our findings suggest that plasma polyamines should be implicated in the pathophysiologic processes of PSD and may be the potential intervention targets for PSD.
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Affiliation(s)
- Yu He
- Department of Epidemiology, School of Public Health, Jiangsu Key Laboratory of Preventive and Translational Medicine for Major Chronic Non-communicable Diseases, MOE Key Laboratory of Geriatric Diseases and Immunology, Suzhou Medical College of Soochow University, Suzhou, Jiangsu Province, 215123, China
| | - Xinyue Chang
- Department of Epidemiology, School of Public Health, Jiangsu Key Laboratory of Preventive and Translational Medicine for Major Chronic Non-communicable Diseases, MOE Key Laboratory of Geriatric Diseases and Immunology, Suzhou Medical College of Soochow University, Suzhou, Jiangsu Province, 215123, China
| | - Yi Liu
- Department of Epidemiology, School of Public Health, Jiangsu Key Laboratory of Preventive and Translational Medicine for Major Chronic Non-communicable Diseases, MOE Key Laboratory of Geriatric Diseases and Immunology, Suzhou Medical College of Soochow University, Suzhou, Jiangsu Province, 215123, China
| | - Jiawen Fei
- Department of Epidemiology, School of Public Health, Jiangsu Key Laboratory of Preventive and Translational Medicine for Major Chronic Non-communicable Diseases, MOE Key Laboratory of Geriatric Diseases and Immunology, Suzhou Medical College of Soochow University, Suzhou, Jiangsu Province, 215123, China
| | - Xiaoli Qin
- Department of Epidemiology, School of Public Health, Jiangsu Key Laboratory of Preventive and Translational Medicine for Major Chronic Non-communicable Diseases, MOE Key Laboratory of Geriatric Diseases and Immunology, Suzhou Medical College of Soochow University, Suzhou, Jiangsu Province, 215123, China
| | - Beiping Song
- Department of Epidemiology, School of Public Health, Jiangsu Key Laboratory of Preventive and Translational Medicine for Major Chronic Non-communicable Diseases, MOE Key Laboratory of Geriatric Diseases and Immunology, Suzhou Medical College of Soochow University, Suzhou, Jiangsu Province, 215123, China
| | - Quan Yu
- Department of Epidemiology, School of Public Health, Jiangsu Key Laboratory of Preventive and Translational Medicine for Major Chronic Non-communicable Diseases, MOE Key Laboratory of Geriatric Diseases and Immunology, Suzhou Medical College of Soochow University, Suzhou, Jiangsu Province, 215123, China
| | - Pinni Yang
- Department of Epidemiology, School of Public Health, Jiangsu Key Laboratory of Preventive and Translational Medicine for Major Chronic Non-communicable Diseases, MOE Key Laboratory of Geriatric Diseases and Immunology, Suzhou Medical College of Soochow University, Suzhou, Jiangsu Province, 215123, China
| | - Mengyao Shi
- Department of Epidemiology, School of Public Health, Jiangsu Key Laboratory of Preventive and Translational Medicine for Major Chronic Non-communicable Diseases, MOE Key Laboratory of Geriatric Diseases and Immunology, Suzhou Medical College of Soochow University, Suzhou, Jiangsu Province, 215123, China; Department of Epidemiology, Tulane University School of Public Health and Tropical Medicine, 1430 Tulane Ave, SL 18, New Orleans, LA, 70112, USA
| | - Daoxia Guo
- Department of Epidemiology, School of Public Health, Jiangsu Key Laboratory of Preventive and Translational Medicine for Major Chronic Non-communicable Diseases, MOE Key Laboratory of Geriatric Diseases and Immunology, Suzhou Medical College of Soochow University, Suzhou, Jiangsu Province, 215123, China
| | - Yanbo Peng
- Department of Neurology, Affiliated Hospital of North China University of Science and Technology, Tangshan, 063000, Hebei Province, China
| | - Jing Chen
- Department of Epidemiology, Tulane University School of Public Health and Tropical Medicine, 1430 Tulane Ave, SL 18, New Orleans, LA, 70112, USA; Department of Medicine, Tulane University School of Medicine, New Orleans, LA, 70112, USA
| | - Aili Wang
- Department of Epidemiology, School of Public Health, Jiangsu Key Laboratory of Preventive and Translational Medicine for Major Chronic Non-communicable Diseases, MOE Key Laboratory of Geriatric Diseases and Immunology, Suzhou Medical College of Soochow University, Suzhou, Jiangsu Province, 215123, China
| | - Tan Xu
- Department of Epidemiology, School of Public Health, Jiangsu Key Laboratory of Preventive and Translational Medicine for Major Chronic Non-communicable Diseases, MOE Key Laboratory of Geriatric Diseases and Immunology, Suzhou Medical College of Soochow University, Suzhou, Jiangsu Province, 215123, China
| | - Jiang He
- Department of Epidemiology, Tulane University School of Public Health and Tropical Medicine, 1430 Tulane Ave, SL 18, New Orleans, LA, 70112, USA; Department of Medicine, Tulane University School of Medicine, New Orleans, LA, 70112, USA
| | - Yonghong Zhang
- Department of Epidemiology, School of Public Health, Jiangsu Key Laboratory of Preventive and Translational Medicine for Major Chronic Non-communicable Diseases, MOE Key Laboratory of Geriatric Diseases and Immunology, Suzhou Medical College of Soochow University, Suzhou, Jiangsu Province, 215123, China
| | - Zhengbao Zhu
- Department of Epidemiology, School of Public Health, Jiangsu Key Laboratory of Preventive and Translational Medicine for Major Chronic Non-communicable Diseases, MOE Key Laboratory of Geriatric Diseases and Immunology, Suzhou Medical College of Soochow University, Suzhou, Jiangsu Province, 215123, China; Department of Epidemiology, Tulane University School of Public Health and Tropical Medicine, 1430 Tulane Ave, SL 18, New Orleans, LA, 70112, USA.
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Hou W, Liu Y, Hao X, Qi J, Jiang Y, Huang S, Zeng P. Relatively independent and complementary roles of family history and polygenic risk score in age at onset and incident cases of 12 common diseases. Soc Sci Med 2025; 371:117942. [PMID: 40073521 DOI: 10.1016/j.socscimed.2025.117942] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/11/2024] [Revised: 02/15/2025] [Accepted: 03/07/2025] [Indexed: 03/14/2025]
Abstract
Few studies have systematically compared the overlap and complementarity of family history (FH) and polygenic risk score (PRS) in terms of disease risk. We here investigated the impacts of FH and PRS on the risk of incident diseases or age at disease onset, as well as their clinical value in risk prediction. We analyzed 12 diseases in the prospective cohort study of UK Biobank (N = 461,220). First, restricted mean survival time analysis was performed to evaluate the influences of FH and PRS on age at onset. Then, Cox proportional hazards model was employed to estimate the effects of FH and PRS on the incident risk. Finally, prediction models were constructed to examine the clinical value of FH and PRS in the incident disease risk. Compared to negative FH, positive FH led to an earlier onset, with an average of 2.29 years earlier between the top and bottom 2.5% PRSs and high blood pressure showing the greatest difference of 6.01 years earlier. Both FH and PRS were related to higher incident risk; but they only exhibited weak interactions on high blood pressure and Alzheimer's disease/dementia, and provided relatively independent and partially complementary information on disease susceptibility, with PRS explaining 7.0% of the FH effect but FH accounting for only 1.1% of the PRS effect for incident cases. Further, FH and PRS showed additional predictive value in risk evaluation, with breast cancer showing the greatest improvement (31.3%). FH and PRS significantly affect a variety of diseases, and they are not interchangeable measures of genetic susceptibility, but instead offer largely independent and partially complementary information. Incorporating FH, PRS, and clinical risk factors simultaneously leads to the greatest predictive value for disease risk assessment.
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Affiliation(s)
- Wenyan Hou
- Department of Biostatistics, School of Public Health, Xuzhou Medical University, Xuzhou, Jiangsu, 221004, China
| | - Yuxin Liu
- Department of Biostatistics, School of Public Health, Xuzhou Medical University, Xuzhou, Jiangsu, 221004, China
| | - Xingjie Hao
- Department of Epidemiology and Biostatistics, School of Public Health, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, 430074, China
| | - Jike Qi
- Department of Biostatistics, School of Public Health, Xuzhou Medical University, Xuzhou, Jiangsu, 221004, China
| | - Yuchen Jiang
- Department of Biostatistics, School of Public Health, Xuzhou Medical University, Xuzhou, Jiangsu, 221004, China
| | - Shuiping Huang
- Department of Biostatistics, School of Public Health, Xuzhou Medical University, Xuzhou, Jiangsu, 221004, China; Jiangsu Engineering Research Center of Biological Data Mining and Healthcare Transformation, Xuzhou Medical University, Xuzhou, Jiangsu, 221004, China
| | - Ping Zeng
- Department of Biostatistics, School of Public Health, Xuzhou Medical University, Xuzhou, Jiangsu, 221004, China; Jiangsu Engineering Research Center of Biological Data Mining and Healthcare Transformation, Xuzhou Medical University, Xuzhou, Jiangsu, 221004, China.
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Shibata K, Yamamoto M, Kagase A, Tokuda T, Tsunamoto H, Shimura T, Kurita A, Yamaguchi R, Saji M, Asami M, Enta Y, Nakashima M, Shirai S, Izumo M, Mizuno S, Watanabe Y, Amaki M, Kodama K, Yamaguchi J, Naganuma T, Bota H, Ohno Y, Yamawaki M, Hachinohe D, Ueno H, Mizutani K, Otsuka T, Kubo S, Hayashida K. Geriatric Nutritional Risk Index Assessment in Patients Undergoing Transcatheter Edge-to-Edge Repair. JACC. ADVANCES 2025; 4:101631. [PMID: 40010112 PMCID: PMC11907445 DOI: 10.1016/j.jacadv.2025.101631] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/12/2024] [Revised: 01/17/2025] [Accepted: 01/19/2025] [Indexed: 02/28/2025]
Abstract
BACKGROUND Transcatheter edge-to-edge repair (TEER) is used to treat patients with mitral regurgitation (MR). The Geriatric Nutritional Risk Index (GNRI) is a well-known nutritional marker that predicts mortality risk. OBJECTIVES The objectives of this study were to elucidate the clinical association between the degree of GNRI and different etiologies of MR and to clarify the patient samples for whom GNRI is more relevant to clinical outcomes following TEER. METHODS Data from 3,554 patients with MR who underwent TEER were analyzed using a Japanese multicenter registry. The patients were classified into 4 groups: GNRI <82, GNRI 82 to 92, GNRI 92 to 98, and GNRI >98. Procedural and clinical outcomes were compared between GNRI groups. Short- and long-term all-cause mortality were explored using Cox regression analysis. RESULTS Among the 3,554 patients, the median GNRI was 92.3. The mean follow-up period was 586.8 ± 436.5 days; 806 patients died during the follow-up period. Thirty-day mortality occurred in 51 patients (1.4%), and the GNRI <82 group had the highest 30-day mortality rate. Kaplan-Meier curves showed significantly better prognoses for the entire cohort, functional MR, and degenerative MR across the 4 groups (P < 0.001). GNRI values, even after adjustment for multiple confounders, showed a stepwise increase in risk of death in the GNRI 92 to 98, GNRI 82 to 92, and GNRI <82 groups compared to GNRI >98 as the reference. CONCLUSIONS Regardless of MR etiology, GNRI is a useful predictor of short- and long-term mortality in patients undergoing TEER. Although TEER is effective for MR patients in malnourished states, further studies focused on the value of identifying and addressing malnutrition in this population are needed.
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Affiliation(s)
- Kenichi Shibata
- Department of Rehabilitation, Nagoya Heart Center, Nagoya, Japan.
| | - Masanori Yamamoto
- Department of Cardiology, Nagoya Heart Center, Nagoya, Japan; Department of Cardiology, Toyohashi Heart Center, Toyohashi, Japan; Department of Cardiology, Gifu Heart Center, Gifu, Japan.
| | - Ai Kagase
- Department of Cardiology, Nagoya Heart Center, Nagoya, Japan
| | - Takahiro Tokuda
- Department of Cardiology, Nagoya Heart Center, Nagoya, Japan
| | | | | | - Azusa Kurita
- Department of Cardiology, Gifu Heart Center, Gifu, Japan
| | - Ryo Yamaguchi
- Department of Cardiology, Toyohashi Heart Center, Toyohashi, Japan
| | - Mike Saji
- Department of Cardiology, Sakakibara Heart Institute, Fuchu, Japan
| | - Masahiko Asami
- Division of Cardiology, Mitsui Memorial Hospital, Tokyo, Japan
| | - Yusuke Enta
- Department of Cardiology, Sendai Kosei Hospital, Sendai, Japan
| | | | - Shinichi Shirai
- Division of Cardiology, Kokura Memorial Hospital, Kitakyushu, Japan
| | - Masaki Izumo
- Division of Cardiology, St. Marianna University School of Medicine Hospital, Kawasaki, Japan
| | - Shingo Mizuno
- Department of Cardiology, Shonan Kamakura General Hospital, Kanagawa, Japan
| | - Yusuke Watanabe
- Department of Cardiology, Teikyo University School of Medicine, Tokyo, Japan
| | - Makoto Amaki
- Department of Cardiology, National Cerebral and Cardiovascular Center, Suita, Japan
| | - Kazuhisa Kodama
- Division of Cardiology, Saiseikai Kumamoto Hospital Cardiovascular Center, Kumamoto, Japan
| | - Junichi Yamaguchi
- Department of Cardiology, Tokyo Woman's Medical University, Tokyo, Japan
| | - Toru Naganuma
- Department of Cardiology, New Tokyo Hospital, Chiba, Japan
| | - Hiroki Bota
- Department of Cardiology, Sapporo Higashi Tokushukai Hospital, Sapporo, Japan
| | - Yohei Ohno
- Department of Cardiology, Tokai University School of Medicine, Isehara, Japan
| | - Masahiro Yamawaki
- Department of Cardiology, Saiseikai Yokohama City Eastern Hospital, Kanagawa, Japan
| | - Daisuke Hachinohe
- Department of Cardiology, Sapporo Heart Center, Sapporo Cardio Vascular Clinic, Sapporo, Japan
| | - Hiroshi Ueno
- Second Department of Internal Medicine, Toyama University Hospital, Toyama, Japan
| | - Kazuki Mizutani
- Division of Cardiology, Department of Medicine, Kinki University Faculty of Medicine, Osaka, Japan
| | - Toshiaki Otsuka
- Department of Hygiene and Public Health, Nippon Medical School, Tokyo, Japan
| | - Shunsuke Kubo
- Department of Cardiology, Kurashiki Central Hospital, Kurashiki, Japan
| | - Kentaro Hayashida
- Department of Cardiology, Keio University School of Medicine, Tokyo, Japan
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Miao S, Xuan Q, Huang W, Jiang Y, Sun M, Qi H, Li A, Liu Z, Li J, Ding X, Wang R. Multi-region nomogram for predicting central lymph node metastasis in papillary thyroid carcinoma using multimodal imaging: A multicenter study. COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE 2025; 261:108608. [PMID: 39827707 DOI: 10.1016/j.cmpb.2025.108608] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/29/2024] [Revised: 12/10/2024] [Accepted: 01/15/2025] [Indexed: 01/22/2025]
Abstract
BACKGROUND AND OBJECTIVE Central lymph node metastasis (CLNM) is associated with high recurrence rate and low survival in patients with papillary thyroid carcinoma (PTC). However, there is no satisfactory model to predict CLNM in PTC. This study aimed to integrate PTC deep learning feature based on ultrasound (US) images, fat radiomics features based on computed tomography (CT) images and clinical characteristics to construct a multimodal and multi-region nomogram (MMRN) for predicting the CLNM in PTC. METHODS We enrolled 661 patients diagnosed with PTC by thyroidectomy from two independent centers. Patients were divided into the primary cohort, internal test cohort (ITC), and external test cohort (ETC), and collected their US images and CT images. Resnet50 was employed to predict the CLNM status of PTC based on US images. Using radiomics feature extraction methods to extract fat radiomics features from CT images. Feature selection was conducted using the least absolute shrinkage and selection operator (LASSO) regression. The predictive performance of the MMRN was evaluated using five-fold cross-validation. We comprehensively evaluated the DLRCN and compared it with five radiologists. RESULTS In the ITC and ETC, the area under the curves (AUCs) of MMRN were 0.829 (95 % CI: 0.822, 0.835) and 0.818 (95 % CI: 0.808, 0.828). The calibration curve revealed good predictive accuracy between the actual probability and predicted probability (P > 0.05). Decision curve analysis showed that the MMRN was clinically useful. Under equal specificity or sensitivity, the performance of MMRN increased by 6.5 % or 2.9 % compared to radiologist assessments. The incorporation of fat radiomics features led to significant net reclassification improvement (NRI) and integrated discrimination improvement (IDI) (NRI=0.174, P < 0.05, IDI=0.035, P < 0.05). CONCLUSION The MMRN demonstrated good performance in predicting the CLNM status of PTC, which was comparable to radiologist assessments. The fat radiomics features exhibited supplementary value for predicting CLNM in PTC.
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Affiliation(s)
- Shidi Miao
- School of Computer Science and Technology, Harbin University of Science and Technology, Harbin, China
| | - Qifan Xuan
- School of Computer Science and Technology, Harbin University of Science and Technology, Harbin, China
| | - Wenjuan Huang
- Department of Internal Medicine, Harbin Medical University Cancer Hospital, Harbin Medical University, NO.150 Haping ST, Nangang District, Harbin 150081, China
| | - Yuyang Jiang
- School of Computer Science and Technology, Harbin University of Science and Technology, Harbin, China
| | - Mengzhuo Sun
- School of Computer Science and Technology, Harbin University of Science and Technology, Harbin, China
| | - Hongzhuo Qi
- School of Computer Science and Technology, Harbin University of Science and Technology, Harbin, China
| | - Ao Li
- School of Computer Science and Technology, Harbin University of Science and Technology, Harbin, China
| | - Zengyao Liu
- Department of Interventional Medicine, The First Affiliated Hospital, Harbin Medical University, Harbin, China
| | - Jing Li
- Department of Geriatrics, The Second Affiliated Hospital, Harbin Medical University, Harbin, China
| | - Xuemei Ding
- School of Computing, Engineering & Intelligent Systems, Ulster University, Northern Ireland, BT48 7JL, United Kingdom
| | - Ruitao Wang
- Department of Internal Medicine, Harbin Medical University Cancer Hospital, Harbin Medical University, NO.150 Haping ST, Nangang District, Harbin 150081, China.
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Goh V, Mallett S, Rodriguez-Justo M, Boulter V, Glynne-Jones R, Khan S, Lessels S, Patel D, Prezzi D, Taylor S, Halligan S. Evaluation of prognostic models to improve prediction of metastasis in patients following potentially curative treatment for primary colorectal cancer: the PROSPECT trial. Health Technol Assess 2025; 29:1-91. [PMID: 40230305 PMCID: PMC12010235 DOI: 10.3310/btmt7049] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/16/2025] Open
Abstract
Background Despite apparently curative treatment, many patients with colorectal cancer develop subsequent metastatic disease. Current prognostic models are criticised because they are based on standard staging and omit novel biomarkers. Improved prognostication is an unmet need. Objectives To improve prognostication for colorectal cancer by developing a baseline multivariable model of standard clinicopathological predictors, and to then improve prediction via addition of promising novel imaging, genetic and immunohistochemical biomarkers. Design Prospective multicentre cohort. Setting Thirteen National Health Service hospitals. Participants Consecutive adult patients with colorectal cancer. Interventions Collection of prespecified standard clinicopathological variables and more novel imaging, genetic and immunohistochemical biomarkers, followed by 3-year follow-up to identify postoperative metastasis. Main outcome Best multivariable prognostic model including perfusion computed tomography compared with tumour/node staging. Secondary outcomes: Additive benefit of perfusion computed tomography and other biomarkers to best baseline model comprising standard clinicopathological predictors; measurement variability between local and central review; biological relationships between perfusion computed tomography and pathology variables. Results Between 2011 and 2016, 448 participants were recruited; 122 (27%) were withdrawn, leaving 326 (226 male, 100 female; mean ± standard deviation 66 ± 10.7 years); 183 (56%) had rectal cancer. Most cancers were locally advanced [≥ T3 stage, 227 (70%)]; 151 (46%) were node-positive (≥ N1 stage); 306 (94%) had surgery; 79 (24%) had neoadjuvant therapy. The resection margin was positive in 15 (5%); 93 (28%) had venous invasion; 125 (38%) had postoperative adjuvant chemotherapy; 81 (25%, 57 male) developed recurrent disease. Prediction of recurrent disease by the baseline clinicopathological time-to-event Weibull multivariable model (age, sex, tumour/node stage, tumour size and location, treatment, venous invasion) was superior to tumour/node staging: sensitivity: 0.57 (95% confidence interval 0.45 to 0.68), specificity 0.74 (95% confidence interval 0.68 to 0.79) versus sensitivity 0.56 (95% confidence interval 0.44 to 0.67), specificity 0.58 (95% confidence interval 0.51 to 0.64), respectively. Addition of perfusion computed tomography variables did not improve prediction significantly: c-statistic: 0.77 (95% confidence interval 0.71 to 0.83) versus 0.76 (95% confidence interval 0.70 to 0.82). Perfusion computed tomography parameters did not differ significantly between patients with and without recurrence (e.g. mean ± standard deviation blood flow of 60.3 ± 24.2 vs. 61.7 ± 34.2 ml/minute/100 ml). Furthermore, baseline model prediction was not improved significantly by the addition of any novel genetic or immunohistochemical biomarkers. We observed variation between local and central computed tomography measurements but neither improved model prediction significantly. We found no clear association between perfusion computed tomography variables and any immunohistochemical measurement or genetic expression. Limitations The number of patients developing metastasis was lower than expected from historical data. Our findings should not be overinterpreted. While the baseline model was superior to tumour/node staging, any clinical utility needs definition in daily practice. Conclusions A prognostic model of standard clinicopathological variables outperformed tumour/node staging, but novel biomarkers did not improve prediction significantly. Biomarkers that appear promising in small single-centre studies may contribute nothing substantial to prognostication when evaluated rigorously. Future work It would be desirable for other researchers to externally evaluate the baseline model. Trial registration This trial is registered as ISRCTN95037515. Funding This award was funded by the National Institute for Health and Care Research (NIHR) Health Technology Assessment programme (NIHR award ref: 09/22/49) and is published in full in Health Technology Assessment; Vol. 29, No. 8. See the NIHR Funding and Awards website for further award information.
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Affiliation(s)
- Vicky Goh
- School of Biomedical Engineering and Imaging Sciences, King's College London, London, UK
| | | | | | | | | | | | - Sarah Lessels
- Scottish Clinical Trials Research Unit (SCTRU), NHS National Services Scotland, Edinburgh, Scotland
| | - Dominic Patel
- Research Department of Pathology, UCL Cancer Institute, London, UK
| | - Davide Prezzi
- School of Biomedical Engineering and Imaging Sciences, King's College London, London, UK
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Morley TJ, Willimitis D, Ripperger M, Lee H, Zhou Y, Han L, Kang J, Meyerson WU, Smoller JW, Choi KW, Walsh CG, Ruderfer DM. Evaluating the impact of modeling choices on the performance of integrated genetic and clinical models. Genet Med 2025; 27:101353. [PMID: 39733260 DOI: 10.1016/j.gim.2024.101353] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/24/2024] [Revised: 12/18/2024] [Accepted: 12/18/2024] [Indexed: 12/30/2024] Open
Abstract
PURPOSE The value of genetic information for improving the performance of clinical risk prediction models has yielded variable conclusions. Many methodological decisions have the potential to contribute to differential results. We performed multiple modeling experiments integrating clinical and demographic data from electronic health records with genetic data to understand which decisions may affect performance. METHODS Clinical data in the form of structured diagnostic codes, medications, procedural codes, and demographics were extracted from 2 large independent health systems, and polygenic risk scores (PRS) were generated across all patients of European ancestry with genetic data in the corresponding biobanks. Crohn's disease was studied based on its substantial genetic component, established electronic health records-based definition, and sufficient prevalence for training and testing. We investigated the impact of choices regarding the PRS integration method, training sample, model complexity, and performance metrics. RESULTS Overall, our results showed that including PRS resulted in higher performance, but this gain was only robust in situations with limited clinical information. We found consistent performance increases from more compute-intensive models, such as random forest, but the impact of other decisions varied by site. CONCLUSION This work highlights the importance of considering methodological decision points in interpreting the impact of PRS on prediction performance in clinical models.
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Affiliation(s)
- Theodore J Morley
- Vanderbilt Genetics Institute, Vanderbilt University Medical Center, Nashville TN; Center for Digital Genomic Medicine, Department of Medicine, Vanderbilt University Medical Center, Nashville TN
| | - Drew Willimitis
- Department of Biomedical Informatics, Vanderbilt University Medical Center, Nashville TN
| | - Michael Ripperger
- Department of Biomedical Informatics, Vanderbilt University Medical Center, Nashville TN
| | - Hyunjoon Lee
- Psychiatric and Neurodevelopmental Genetics Unit, Center for Genomic Medicine, Massachusetts General Hospital, Boston MA; Center for Precision Psychiatry, Department of Psychiatry, Massachusetts General Hospital, Boston MA
| | - Yu Zhou
- Psychiatric and Neurodevelopmental Genetics Unit, Center for Genomic Medicine, Massachusetts General Hospital, Boston MA; Center for Precision Psychiatry, Department of Psychiatry, Massachusetts General Hospital, Boston MA
| | - Lide Han
- Vanderbilt Genetics Institute, Vanderbilt University Medical Center, Nashville TN; Center for Digital Genomic Medicine, Department of Medicine, Vanderbilt University Medical Center, Nashville TN
| | - Jooeun Kang
- Vanderbilt Genetics Institute, Vanderbilt University Medical Center, Nashville TN
| | - William U Meyerson
- Center for Precision Psychiatry, Department of Psychiatry, Massachusetts General Hospital, Boston MA; Department of Biomedical Informatics, Harvard Medical School, Boston, MA
| | - Jordan W Smoller
- Psychiatric and Neurodevelopmental Genetics Unit, Center for Genomic Medicine, Massachusetts General Hospital, Boston MA; Center for Precision Psychiatry, Department of Psychiatry, Massachusetts General Hospital, Boston MA; Stanley Center for Psychiatric Research, Broad Institute, Cambridge, MA
| | - Karmel W Choi
- Psychiatric and Neurodevelopmental Genetics Unit, Center for Genomic Medicine, Massachusetts General Hospital, Boston MA; Center for Precision Psychiatry, Department of Psychiatry, Massachusetts General Hospital, Boston MA
| | - Colin G Walsh
- Vanderbilt Genetics Institute, Vanderbilt University Medical Center, Nashville TN; Center for Digital Genomic Medicine, Department of Medicine, Vanderbilt University Medical Center, Nashville TN; Department of Biomedical Informatics, Vanderbilt University Medical Center, Nashville TN; Department of Psychiatry and Behavioral Sciences, Vanderbilt University Medical Center, Nashville, TN.
| | - Douglas M Ruderfer
- Vanderbilt Genetics Institute, Vanderbilt University Medical Center, Nashville TN; Center for Digital Genomic Medicine, Department of Medicine, Vanderbilt University Medical Center, Nashville TN; Department of Biomedical Informatics, Vanderbilt University Medical Center, Nashville TN; Department of Psychiatry and Behavioral Sciences, Vanderbilt University Medical Center, Nashville, TN.
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Carlson DE, Chavarriaga R, Liu Y, Lotte F, Lu BL. The NERVE-ML (neural engineering reproducibility and validity essentials for machine learning) checklist: ensuring machine learning advances neural engineering . J Neural Eng 2025;22:021002. [PMID: 40073450 PMCID: PMC11948487 DOI: 10.1088/1741-2552/adbfbd] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/16/2024] [Revised: 02/10/2025] [Accepted: 03/12/2025] [Indexed: 03/14/2025]
Abstract
Objective.Machine learning's (MLs) ability to capture intricate patterns makes it vital in neural engineering research. With its increasing use, ensuring the validity and reproducibility of ML methods is critical. Unfortunately, this has not always been the case in practice, as there have been recent retractions across various scientific fields due to the misuse of ML methods and validation procedures. To address these concerns, we propose the first version of the neural engineering reproducibility and validity essentials for ML (NERVE-ML) checklist, a framework designed to promote the transparent, reproducible, and valid application of ML in neural engineering.Approach.We highlight some of the unique challenges of model validation in neural engineering, including the difficulties from limited subject numbers, repeated or non-independent samples, and high subject heterogeneity. Through detailed case studies, we demonstrate how different validation approaches can lead to divergent scientific conclusions, highlighting the importance of selecting appropriate procedures guided by the NERVE-ML checklist. Effectively addressing these challenges and properly scoping scientific conclusions will ensure that ML contributes to, rather than hinders, progress in neural engineering.Main results.Our case studies demonstrate that improper validation approaches can result in flawed studies or overclaimed scientific conclusions, complicating the scientific discourse. The NERVE-ML checklist effectively addresses these concerns by providing guidelines to ensure that ML approaches in neural engineering are reproducible and lead to valid scientific conclusions.Significance.By effectively addressing these challenges and properly scoping scientific conclusions guided by the NERVE-ML checklist, we aim to help pave the way for a future where ML reliably enhances the quality and impact of neural engineering research.
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Affiliation(s)
- David E Carlson
- Department of Biostatistics and Bioinformatics, Duke University School of Medicine, Durham, NC, United States of America
- Department of Computer Science, Department of Civil and Environmental Engineering, Duke University, Durham, NC, United States of America
| | - Ricardo Chavarriaga
- Centre for Artificial Intelligence, School of Engineering, Zurich University of Applied Sciences ZHAW, Winterthur, Switzerland
| | - Yiling Liu
- Program in Computational Biology and Bioinformatics, Duke University School of Medicine, Durham, NC, United States of America
| | - Fabien Lotte
- Inria Center at the University of Bordeaux, Talence 33405, France
- LaBRI (CNRS/University Bordeaux/Bordeaux INP), Talence 33405, France
| | - Bao-Liang Lu
- Center for Brain-Like Computing and Machine Intelligence, Department of Computer Science and Engineering, Shanghai Jiao Tong University, Shanghai 200240, People’s Republic of China
- RuiJin-Mihoyo Laboratory, Clinical Neuroscience Center, RuiJin Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai 200020, People’s Republic of China
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Zou H, Xie J, Ma X, Xie Y. The Value of TyG-Related Indices in Evaluating MASLD and Significant Liver Fibrosis in MASLD. Can J Gastroenterol Hepatol 2025; 2025:5871321. [PMID: 40114971 PMCID: PMC11925628 DOI: 10.1155/cjgh/5871321] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 06/17/2024] [Accepted: 02/22/2025] [Indexed: 03/22/2025] Open
Abstract
Background: Triglyceride glucose (TyG) and its related index (TyG-body mass index, TyG-BMI) are recognized as markers for nonalcoholic fatty liver disease (NAFLD), but their associations with metabolic dysfunction-associated steatotic liver disease (MASLD) and significant liver fibrosis (SLF) risk are less studied. Therefore, this study explores the effectiveness of these indices in assessing MASLD and SLF risk in the U.S. population. Methods: Utilizing data from the National Health and Nutrition Examination Survey (NHANES), a cross-sectional study involving 5520 participants from the general population was performed. This research measured demographic, anthropometric, biochemical, comorbid, and lifestyle characteristics, all of which are considered risk factors for MASLD/SLF. Results: Upon controlling for confounding variables, only the TyG-BMI was found to have a consistent positive association with the risk of MASLD and SLF. Specifically, for each standard deviation increase, the odds ratio (OR) and 95% confidence interval (CI) were 4.44 (3.64-9.26, p for trend < 0.001) for MASLD and 2.48 (2.15-2.87, p for trend < 0.001) for SLF. Significant interactions were identified among age, sex, and the risk of MASLD associated with the TyG-BMI. The TyG-BMI also had a significant threshold effect on the risk of MASLD at a cutoff point of 180.71. Furthermore, the area under the receiver operating characteristic curve (AUC) revealed that the TyG-BMI better predicted the risk of MASLD and SLF (AUC 0.820, 95% CI 0.810-0.831; AUC 0.729, 95% CI 0.703-0.756, respectively). In addition, the integrated discrimination improvement (IDI), decision curve analysis (DCA), and net reclassification index (NRI) also demonstrated the satisfactory predictive ability of the TyG-BMI. Conclusions: Within this large dataset, the TyG-BMI was independently associated with both the MASLD score and the SLF in the MASLD cohort. Its predictive efficacy consistently surpassed that of TyG and other noninvasive models, indicating that TyG-BMI has potential for the early identification of MASLD and SLF risk.
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Affiliation(s)
- Haoxuan Zou
- Department of Gastroenterology and Hepatology, West China Hospital, Sichuan University, Chengdu, Sichuan, China
| | - Jiejie Xie
- Department of Gastroenterology and Hepatology, West China Hospital, Sichuan University, Chengdu, Sichuan, China
| | - Xiaopu Ma
- Department of Gastroenterology and Hepatology, West China Hospital, Sichuan University, Chengdu, Sichuan, China
| | - Yan Xie
- Department of Gastroenterology and Hepatology, West China Hospital, Sichuan University, Chengdu, Sichuan, China
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Marcinkiewicz AM, Zhang W, Shanbhag A, Miller RJH, Lemley M, Ramirez G, Buchwald M, Killekar A, Kavanagh PB, Feher A, Miller EJ, Einstein AJ, Ruddy TD, Liang JX, Builoff V, Ouyang D, Berman DS, Dey D, Slomka PJ. Holistic AI analysis of hybrid cardiac perfusion images for mortality prediction. NPJ Digit Med 2025; 8:158. [PMID: 40082599 PMCID: PMC11906890 DOI: 10.1038/s41746-025-01526-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/02/2024] [Accepted: 02/18/2025] [Indexed: 03/16/2025] Open
Abstract
Low-dose computed tomography attenuation correction (CTAC) scans are used in hybrid myocardial perfusion imaging (MPI) for attenuation correction and coronary calcium scoring, and contain additional anatomic and pathologic information not utilized in clinical assessment. We seek to uncover the full potential of these scans utilizing a holistic artificial intelligence (AI) approach. A multi-structure model segmented 33 structures and quantified 15 radiomics features in each organ in 10,480 patients from 4 sites. Coronary calcium and epicardial fat measures were obtained from separate AI models. The area under the receiver-operating characteristic curves (AUC) for all-cause mortality prediction of the model utilizing MPI, CT, stress test, and clinical features was 0.80 (95% confidence interval [0.74-0.87]), which was higher than for coronary calcium (0.64 [0.57-0.71]) or perfusion (0.62 [0.55-0.70]), with p < 0.001 for both. A comprehensive multimodality approach can significantly improve mortality prediction compared to MPI information alone in patients undergoing hybrid MPI.
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Affiliation(s)
- Anna M Marcinkiewicz
- Departments of Medicine (Division of Artificial Intelligence in Medicine), Imaging and Biomedical Sciences, Cedars-Sinai Medical Center, Los Angeles, CA, USA
- Center of Radiological Diagnostics, National Medical Institute of the Ministry of the Interior and Administration, Warsaw, Poland
| | - Wenhao Zhang
- Departments of Medicine (Division of Artificial Intelligence in Medicine), Imaging and Biomedical Sciences, Cedars-Sinai Medical Center, Los Angeles, CA, USA
| | - Aakash Shanbhag
- Departments of Medicine (Division of Artificial Intelligence in Medicine), Imaging and Biomedical Sciences, Cedars-Sinai Medical Center, Los Angeles, CA, USA
- Signal and Image Processing Institute, Ming Hsieh Department of Electrical and Computer Engineering, University of Southern California, Los Angeles, CA, USA
| | - Robert J H Miller
- Departments of Medicine (Division of Artificial Intelligence in Medicine), Imaging and Biomedical Sciences, Cedars-Sinai Medical Center, Los Angeles, CA, USA
- Department of Cardiac Sciences, University of Calgary, Calgary, AB, Canada
| | - Mark Lemley
- Departments of Medicine (Division of Artificial Intelligence in Medicine), Imaging and Biomedical Sciences, Cedars-Sinai Medical Center, Los Angeles, CA, USA
| | - Giselle Ramirez
- Departments of Medicine (Division of Artificial Intelligence in Medicine), Imaging and Biomedical Sciences, Cedars-Sinai Medical Center, Los Angeles, CA, USA
| | - Mikolaj Buchwald
- Departments of Medicine (Division of Artificial Intelligence in Medicine), Imaging and Biomedical Sciences, Cedars-Sinai Medical Center, Los Angeles, CA, USA
| | - Aditya Killekar
- Departments of Medicine (Division of Artificial Intelligence in Medicine), Imaging and Biomedical Sciences, Cedars-Sinai Medical Center, Los Angeles, CA, USA
| | - Paul B Kavanagh
- Departments of Medicine (Division of Artificial Intelligence in Medicine), Imaging and Biomedical Sciences, Cedars-Sinai Medical Center, Los Angeles, CA, USA
| | - Attila Feher
- Section of Cardiovascular Medicine, Department of Internal Medicine, Yale University School of Medicine, New Haven, CT, USA
| | - Edward J Miller
- Section of Cardiovascular Medicine, Department of Internal Medicine, Yale University School of Medicine, New Haven, CT, USA
| | - Andrew J Einstein
- Division of Cardiology, Department of Medicine, and Department of Radiology, Columbia University Irving Medical Center and New York-Presbyterian Hospital, New York, NY, USA
| | - Terrence D Ruddy
- Division of Cardiology, University of Ottawa Heart Institute, Ottawa, ON, Canada
| | - Joanna X Liang
- Departments of Medicine (Division of Artificial Intelligence in Medicine), Imaging and Biomedical Sciences, Cedars-Sinai Medical Center, Los Angeles, CA, USA
| | - Valerie Builoff
- Departments of Medicine (Division of Artificial Intelligence in Medicine), Imaging and Biomedical Sciences, Cedars-Sinai Medical Center, Los Angeles, CA, USA
| | - David Ouyang
- Departments of Medicine (Division of Artificial Intelligence in Medicine), Imaging and Biomedical Sciences, Cedars-Sinai Medical Center, Los Angeles, CA, USA
| | - Daniel S Berman
- Departments of Medicine (Division of Artificial Intelligence in Medicine), Imaging and Biomedical Sciences, Cedars-Sinai Medical Center, Los Angeles, CA, USA
| | - Damini Dey
- Departments of Medicine (Division of Artificial Intelligence in Medicine), Imaging and Biomedical Sciences, Cedars-Sinai Medical Center, Los Angeles, CA, USA
| | - Piotr J Slomka
- Departments of Medicine (Division of Artificial Intelligence in Medicine), Imaging and Biomedical Sciences, Cedars-Sinai Medical Center, Los Angeles, CA, USA.
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Gao C, Liu J, Wang D, Liu M, Qiu J. Risk factors and an optimized prediction model for urosepsis in diabetic patients with upper urinary tract stones. Sci Rep 2025; 15:8183. [PMID: 40065041 PMCID: PMC11893776 DOI: 10.1038/s41598-025-91787-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/21/2024] [Accepted: 02/24/2025] [Indexed: 03/14/2025] Open
Abstract
To identify independent risk factors for urosepsis in diabetic patients with upper urinary tract stones (UUTS) and develop a prediction model to facilitate early detection and diagnosis, we retrospectively reviewed medical records of patients admitted between January 2020 and June 2023. Patients were divided based on the quick Sequential Organ Failure Assessment (qSOFA) score. The least absolute shrinkage and selection operator (LASSO) regression analysis was used for variable selection to form a preliminary model. The model was optimized and validated using the receiver operating characteristic (ROC) curve, the Hosmer-Lemeshow test and calibration curve, and decision curve analysis (DCA). A nomogram was constructed for visualization. A total of 434 patients were enrolled, with 66 cases and 368 controls. Six optimal predictors were identified: underweight, sarcopenia, poor performance status, midstream urine culture, urinary leukocyte count, and albumin-globulin ratio (AGR). The midstream urine culture was excluded due to its inability to provide rapid results. The final model demonstrated good prediction accuracy and clinical utility, with no significant difference in performance compared to the initial model. The study developed a prediction model for urosepsis risk in diabetic patients with UUTS, presenting a convenient tool for timely diagnosis, particularly in non-operated patients.
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Affiliation(s)
- Chongxiang Gao
- Department of Urology, The Sixth Affiliated Hospital, Sun Yat-sen University, Guangzhou, China
- Biomedical Innovation Center, The Sixth Affiliated Hospital, Sun Yat-sen University, Guangzhou, China
- Department of Urology, Xiangya Hospital, Central South University, Changsha, China
| | - Jiancen Liu
- Department of Urology, Xiangya Hospital, Central South University, Changsha, China
| | - Dejuan Wang
- Department of Urology, The Sixth Affiliated Hospital, Sun Yat-sen University, Guangzhou, China.
- Biomedical Innovation Center, The Sixth Affiliated Hospital, Sun Yat-sen University, Guangzhou, China.
| | - Minghui Liu
- Department of Urology, Xiangya Hospital, Central South University, Changsha, China.
- National Clinical Research Center for Geriatric Disorders, Xiangya Hospital, Central South University, Changsha, China.
| | - Jianguang Qiu
- Department of Urology, The Sixth Affiliated Hospital, Sun Yat-sen University, Guangzhou, China.
- Biomedical Innovation Center, The Sixth Affiliated Hospital, Sun Yat-sen University, Guangzhou, China.
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Liu Y, Hou W, Gao T, Yan Y, Wang T, Zheng C, Zeng P. Influence and role of polygenic risk score in the development of 32 complex diseases. J Glob Health 2025; 15:04071. [PMID: 40063714 PMCID: PMC11893022 DOI: 10.7189/jogh.15.04071] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/14/2025] Open
Abstract
Background The polygenic risk score (PRS) has been perceived as advantageous in predicting the risk of complex diseases compared to other measures. We aimed to systematically evaluate the influence of PRS on disease outcome and to explore its predictive value. Methods We comprehensively assessed the relationship between PRS and 32 complex diseases in the UK Biobank. We used Cox models to estimate the effects of PRS on the incidence risk. Then, we constructed prediction models to assess the clinical utility of PRS in risk prediction. For 16 diseases, we further compared the disease risk and prediction capability of PRS across early and late-onset cases. Results Higher PRS led to greater incident risk, with hazard ratio (HR) ranging from 1.07 (95% confidence interval (CI) = 1.06-1.08) for panic/anxiety disorder to 4.17 (95% CI = 4.03-4.31) for acute pancreatitis. This effect was more pronounced in early-onset cases for 12 diseases, increasing by 52.8% on average. Particularly, the early-onset risk of heart failure associated with PRS (HR = 3.02; 95% CI = 2.53-3.59) was roughly twice compared to the late-onset risk (HR = 1.48; 95% CI = 1.46-1.51). Compared to average PRS (20-80%), individuals positioned within the top 2.5% of the PRS distribution exhibited varying degrees of elevated risk, corresponding to a more than five times greater risk on average. PRS showed additional value in clinical risk prediction, causing an average improvement of 6.1% in prediction accuracy. Further, PRS demonstrated higher predictive accuracy for early-onset cases of 11 diseases, with heart failure displaying the most significant (37.5%) improvement when incorporating PRS into the prediction model (concordance index (C-index) = 0.546; standard error (SE) = 0.011 vs. C-index = 0.751; SE = 0.010, P = 2.47 × 10-12). Conclusions As a valuable complement to traditional clinical risk tools, PRS is closely related to disease risk and can further enhance prediction accuracy, especially for early-onset cases, underscoring its potential role in targeted prevention for high-risk groups.
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Affiliation(s)
- Yuxin Liu
- Department of Biostatistics, School of Public Health, Xuzhou Medical University, Xuzhou, Jiangsu, China
| | - Wenyan Hou
- Department of Biostatistics, School of Public Health, Xuzhou Medical University, Xuzhou, Jiangsu, China
| | - Tongyu Gao
- Department of Biostatistics, School of Public Health, Xuzhou Medical University, Xuzhou, Jiangsu, China
| | - Yu Yan
- Department of Biostatistics, School of Public Health, Xuzhou Medical University, Xuzhou, Jiangsu, China
| | - Ting Wang
- Department of Biostatistics, School of Public Health, Xuzhou Medical University, Xuzhou, Jiangsu, China
| | - Chu Zheng
- Department of Biostatistics, School of Public Health, Xuzhou Medical University, Xuzhou, Jiangsu, China
- Jiangsu Engineering Research Centre of Biological Data Mining and Healthcare Transformation, Xuzhou Medical University, Xuzhou, Jiangsu, China
| | - Ping Zeng
- Department of Biostatistics, School of Public Health, Xuzhou Medical University, Xuzhou, Jiangsu, China
- Jiangsu Engineering Research Centre of Biological Data Mining and Healthcare Transformation, Xuzhou Medical University, Xuzhou, Jiangsu, China
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50
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Li C, Diao YK, Li YF, Lv SD, Wang XM, Wang XD, Zheng QX, Wang H, Liu H, Lin KY, Liang YJ, Zhou YH, Gu WM, Wang MD, Yao LQ, Xu XF, Xu JH, Gu LH, Pawlik TM, Shen F, Yang T. α-Fetoprotein model versus Milan criteria in predicting outcomes after hepatic resection for hepatocellular carcinoma: multicentre study. BJS Open 2025; 9:zraf041. [PMID: 40202169 PMCID: PMC11979696 DOI: 10.1093/bjsopen/zraf041] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/23/2024] [Revised: 01/20/2025] [Accepted: 02/21/2025] [Indexed: 04/10/2025] Open
Abstract
BACKGROUND The Milan criteria and the French α-fetoprotein (AFP) model have both been validated for predicting outcomes after liver transplantation for hepatocellular carcinoma, with the Milan criteria also used for predicting outcomes after hepatic resection. The aim of this study was to evaluate the AFP model's predictive value for recurrence and survival following hepatocellular carcinoma resection and compare its performance with that of the Milan criteria. METHODS Data for patients who underwent hepatocellular carcinoma resection between 2002 and 2021 were analysed. For both the AFP model and Milan criteria, patients were divided into two groups: those with hepatocellular carcinoma within and beyond the AFP model (scores ≤ 2 and > 2 points, respectively) and the Milan criteria. Cumulative recurrence and overall survival rates were compared between patients within and beyond the AFP model. Predictions of recurrence and overall survival by the AFP model and Milan criteria were compared using net reclassification improvement and area under the receiver operating characteristic curve analyses. RESULTS Among 1968 patients evaluated, 1058 (53.8%) and 940 (47.8%) were classified as beyond on the AFP model and Milan criteria, respectively. After controlling for competing factors on multivariable analyses, being beyond the AFP model was independently associated with recurrence and worse overall survival after resection of hepatocellular carcinoma. Time-dependent net reclassification improvement and area under the receiver operating characteristic curve analyses demonstrated that the AFP model was superior to the Milan criteria in predicting recurrence. Of note, patients who were classified as beyond both the Milan criteria and AFP model had an even higher risk of postoperative recurrence and mortality (hazard ratios 1.51 and 1.47, respectively). CONCLUSION The French AFP model demonstrated superior prognostic accuracy to the Milan criteria in predicting recurrence and survival after hepatocellular carcinoma resection. The AFP model not only effectively stratified patient risk but also identified a subgroup of high-risk patients among those beyond the Milan criteria.
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Affiliation(s)
- Chao Li
- Department of Hepatobiliary Surgery, Eastern Hepatobiliary Surgery Hospital, Naval Medical University, Shanghai, China
| | - Yong-Kang Diao
- Department of Hepatobiliary Surgery, Eastern Hepatobiliary Surgery Hospital, Naval Medical University, Shanghai, China
| | - Yi-Fan Li
- Department of Hepatobiliary Surgery, Affiliated Hospital of Nantong University, Nantong, China
| | - Shao-Dong Lv
- Department of Hepatobiliary Surgery, Eastern Hepatobiliary Surgery Hospital, Naval Medical University, Shanghai, China
| | - Xian-Ming Wang
- Department of General Surgery, First Affiliated Hospital of Shandong First Medical University & Shandong Provincial Qianfoshan Hospital, Jinan, China
| | - Xue-Dong Wang
- Hepatopancreatobiliary Centre, Beijing Tsinghua Changgung Hospital, School of Clinical Medicine, Tsinghua Medicine, Tsinghua University, Beijing, China
| | - Qi-Xuan Zheng
- Department of Hepatobiliary Surgery, Shandong Provincial Hospital Affiliated to Shandong University, Jinan, China
| | - Hong Wang
- Department of General Surgery, Liuyang People’s Hospital, Liuyang, China
| | - Han Liu
- Department of Hepatobiliary and Pancreatic Surgery, General Surgery Centre, First Hospital of Jilin University, Changchun, China
| | - Kong-Ying Lin
- Department of Hepatobiliary Surgery, Mengchao Hepatobiliary Hospital, Fujian Medical University, Fujian, China
| | - Ying-Jian Liang
- Department of Hepatobiliary Surgery, First Affiliated Hospital of Harbin Medical University, Harbin, Heilongjiang, China
| | - Ya-Hao Zhou
- Department of Hepatobiliary Surgery, Pu’er People’s Hospital, Pu’er, China
| | - Wei-Min Gu
- First Department of General Surgery, Fourth Hospital of Harbin, Harbin, Heilongjiang, China
| | - Ming-Da Wang
- Department of Hepatobiliary Surgery, Eastern Hepatobiliary Surgery Hospital, Naval Medical University, Shanghai, China
| | - Lan-Qing Yao
- Department of Hepatobiliary Surgery, Eastern Hepatobiliary Surgery Hospital, Naval Medical University, Shanghai, China
| | - Xin-Fei Xu
- Department of Hepatobiliary Surgery, Eastern Hepatobiliary Surgery Hospital, Naval Medical University, Shanghai, China
| | - Jia-Hao Xu
- Department of Hepatobiliary Surgery, Eastern Hepatobiliary Surgery Hospital, Naval Medical University, Shanghai, China
| | - Li-Hui Gu
- Department of Hepatobiliary Surgery, Eastern Hepatobiliary Surgery Hospital, Naval Medical University, Shanghai, China
| | - Timothy M Pawlik
- Department of Surgery, Ohio State University, Wexner Medical Centre, Columbus, Ohio, USA
| | - Feng Shen
- Department of Hepatobiliary Surgery, Eastern Hepatobiliary Surgery Hospital, Naval Medical University, Shanghai, China
| | - Tian Yang
- Department of Hepatobiliary Surgery, Eastern Hepatobiliary Surgery Hospital, Naval Medical University, Shanghai, China
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