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Wu Z, Famous M, Stoikidou T, Bowden FES, Dominic G, Huws SA, Godoy-Santos F, Oyama LB. Unravelling AMR dynamics in the rumenofaecobiome: Insights, challenges and implications for One Health. Int J Antimicrob Agents 2025; 66:107494. [PMID: 40120959 DOI: 10.1016/j.ijantimicag.2025.107494] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/10/2024] [Revised: 03/01/2025] [Accepted: 03/13/2025] [Indexed: 03/25/2025]
Abstract
Antimicrobial resistance (AMR) is a critical global threat to human, animal and environmental health, exacerbated by horizontal gene transfer (HGT) via mobile genetic elements. This poses significant challenges that have a negative impact on the sustainability of the One Health approach, hindering its long-term viability and effectiveness in addressing the interconnectedness of global health. Recent studies on livestock animals, specifically ruminants, indicate that culturable ruminal bacteria harbour AMR genes with the potential for HGT. However, these studies have focused predominantly on using the faecobiome as a proxy to the rumen microbiome or using easily isolated and culturable bacteria, overlooking the unculturable population. These unculturable microbial groups could have a profound influence on the rumen resistome and AMR dynamics within livestock ecosystems, potentially holding critical insights for advanced understanding of AMR in One Health. In order to address this gap, this review of current research on the burden of AMR in livestock was undertaken, and it is proposed that combined study of the rumen microbiome and faecobiome, termed the 'rumenofaecobiome', should be performed to enhance understanding of the risks of AMR in ruminant livestock. This review discusses the complexities of the rumen microbiome and the risks of AMR transmission in this microbiome in a One Health context. AMR transmission dynamics and methodologies for assessing the risks of AMR in livestock are summarized, and future considerations for researching the impact of AMR in the rumen microbiome and the implications within the One Health framework are discussed.
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Affiliation(s)
- Ziming Wu
- School of Biological Science, Institute for Global Food Security, Queen's University Belfast, Belfast, UK.
| | - Mustasim Famous
- School of Biological Science, Institute for Global Food Security, Queen's University Belfast, Belfast, UK; Department of Animal Science, Khulna Agricultural University, Khulna, Bangladesh
| | - Theano Stoikidou
- School of Biological Science, Institute for Global Food Security, Queen's University Belfast, Belfast, UK
| | - Freya E S Bowden
- School of Biological Science, Institute for Global Food Security, Queen's University Belfast, Belfast, UK
| | - Gama Dominic
- School of Biological Science, Institute for Global Food Security, Queen's University Belfast, Belfast, UK
| | - Sharon A Huws
- School of Biological Science, Institute for Global Food Security, Queen's University Belfast, Belfast, UK
| | - Fernanda Godoy-Santos
- School of Biological Science, Institute for Global Food Security, Queen's University Belfast, Belfast, UK
| | - Linda B Oyama
- School of Biological Science, Institute for Global Food Security, Queen's University Belfast, Belfast, UK.
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2
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Yan X, Wang J, Wen R, Chen X, Chen GQ. The halo of future bio-industry based on engineering Halomonas. Metab Eng 2025; 90:16-32. [PMID: 40049362 DOI: 10.1016/j.ymben.2025.03.001] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/19/2024] [Revised: 03/02/2025] [Accepted: 03/03/2025] [Indexed: 03/10/2025]
Abstract
The utilization of microorganisms to transform biomass into biofuels and biochemicals presents a viable and competitive alternative to conventional petroleum refining processes. Halomonas species are salt-tolerant and alkaliphilic, endowed with various beneficial properties rendering them as contamination resistant platforms for industrial biotechnology, facilitating the commercial-scale production of valuable bioproducts. Here we summarized the metabolic and genomic engineering approaches, as well as the biochemical products synthesized by Halomonas. Methods were presented for expanding substrates utilization in Halomonas to enhance its capabilities as a robust workhorse for bioproducts. In addition, we briefly reviewed the Next Generation Industrial Biotechnology (NGIB) based on Halomonas for open and continuous fermentation. In particular, we proposed the industrial attempts from Halomonas chassis and the rising prospects and essential strategies to enable the successful development of Halomonas as microbial NGIB manufacturing platforms.
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Affiliation(s)
- Xu Yan
- Tsinghua-Peking Center for Life Sciences, Beijing, 100084, China; School of Life Sciences, Tsinghua University, Beijing, 100084, China
| | - Jiale Wang
- School of Life Sciences, Tsinghua University, Beijing, 100084, China
| | - Rou Wen
- School of Life Sciences, Tsinghua University, Beijing, 100084, China
| | - Xinyu Chen
- Tsinghua-Peking Center for Life Sciences, Beijing, 100084, China; School of Life Sciences, Tsinghua University, Beijing, 100084, China
| | - Guo-Qiang Chen
- Tsinghua-Peking Center for Life Sciences, Beijing, 100084, China; School of Life Sciences, Tsinghua University, Beijing, 100084, China; Center for Synthetic and Systems Biology, Tsinghua University, Beijing, 100084, China; MOE Key Lab for Industrial Biocatalysis, Dept Chemical Engineering, Tsinghua University, Beijing, 100084, China.
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3
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Zhang B, Li X, Jiang C, Wang C, Que H, Zheng C, Ji Z, Tao X, Xu H, Shi C. Construction of PVA/OHA-Gs@PTMC/PHA double-layer nanofiber flexible scaffold with antibacterial function for tension free rectal in-situ reconstruction. Biomaterials 2025; 317:123064. [PMID: 39754964 DOI: 10.1016/j.biomaterials.2024.123064] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/27/2024] [Revised: 11/25/2024] [Accepted: 12/26/2024] [Indexed: 01/06/2025]
Abstract
The effective prevention and treatment of anastomotic leakage after intestinal anastomosis for colorectal diseases is still a major clinical challenge. In order to assist intestinal anastomosis healing and avoid anastomotic leakage caused by high tension, low blood supply or infection, we designed a double-layer nanofiber intestinal anastomosis scaffold, which was composed of electrospun PTMC/PHA nanofibers as the main layer, and electrospun PVA/OHA-Gs nanofibers with antibacterial properties as the antibacterial surface layer. This double-layer scaffold has good toughness, its maximum tensile force value could reach 8 N, elongation could reach 400 %, and it has hydrophilic properties, and its contact angle was about 60°. On the basis of reducing anastomotic tension and isolating intestinal contents, this double-layer nanofiber anastomotic scaffold not only played an antibacterial effect in the short term after surgery to reduce inflammatory response, but also had the characteristics of multiple three-dimensional network structure like extracellular matrix which could promote tissue healing. The PVA/OHA-Gs@PTMC/PHA scaffold was implanted into a rabbit model simulating mechanical intestinal obstruction, and the results showed that the nanofibers of the scaffold could be degraded in vivo while maintaining a certain stability, that is, the overall structure of the PVA/OHA-Gs@PTMC/PHA scaffold would not shrink and deform due to degradation in a certain period of time. Therefore, the treatment with this scaffold showed better healing at the anastomotic site. Compared to the direct anastomosis group and pure PTMC scaffold group, the double-layer scaffold group promoted a faster return to normal anastomotic strength within 7 days. This PVA/OHA-Gs@PTMC/PHA double-layer nanofiber flexible scaffold appears to be a promising therapeutic strategy to prevent anastomotic leakage after intestinal anastomosis.
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Affiliation(s)
- Bingxu Zhang
- Wenzhou Institute, University of Chinese Academy of Sciences, Wenzhou, Zhejiang, 325011, China
| | - Xujian Li
- Wenzhou Institute, University of Chinese Academy of Sciences, Wenzhou, Zhejiang, 325011, China
| | - Chuan Jiang
- Department of Gastrointestinal Surgery, The Fifth Affiliated Hospital of Wenzhou Medical University, Lishui, 323000, Zhejiang, China
| | - Chuanguang Wang
- Department of Gastrointestinal Surgery, The Fifth Affiliated Hospital of Wenzhou Medical University, Lishui, 323000, Zhejiang, China
| | - Haifeng Que
- Department of Gastrointestinal Surgery, The Fifth Affiliated Hospital of Wenzhou Medical University, Lishui, 323000, Zhejiang, China
| | - Cheng Zheng
- Department of Critical Care Medicine, Taizhou Municipal Hospital, Taizhou, Zhejiang, 318000, China
| | - Zhixiao Ji
- Wenzhou Institute, University of Chinese Academy of Sciences, Wenzhou, Zhejiang, 325011, China
| | - Xudong Tao
- Department of Gastrointestinal Surgery, The Fifth Affiliated Hospital of Wenzhou Medical University, Lishui, 323000, Zhejiang, China
| | - Hongtao Xu
- Department of Gastrointestinal Surgery, The Fifth Affiliated Hospital of Wenzhou Medical University, Lishui, 323000, Zhejiang, China.
| | - Changcan Shi
- Wenzhou Institute, University of Chinese Academy of Sciences, Wenzhou, Zhejiang, 325011, China.
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4
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Mao B, Tian M, Yin Y, Li L, Li J, Wei D, Fu W. A Novel Injectable Cell-Loaded Hydrogel System for Cartilage Repair: In Vivo and In Vitro Study. Tissue Eng Part A 2025. [PMID: 40340534 DOI: 10.1089/ten.tea.2025.0024] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/10/2025] Open
Abstract
Polyhydroxyalkanoates are promising biomaterials, but their application in cartilage repair is still limited. In this study, an injectable thermosensitive hydrogel poly(3-hydroxybutyrate-co-3-hydroxyvalerate-co-3-hydroxyhexanoate)-Polyethylene Glycol (PEG)/hyaluronic acid/kartogenin was prepared from 3-hydroxybutyrate, 3-hydroxyvalerate, 3-hydroxyhexanoate, hyaluronic acid, and kartogenin. The hydrogels are porous, temperature-sensitive, and hydrophilic and have good compressive modulus. Mesenchymal stem cells derived from peripheral blood can proliferate on the hydrogels under two- and three-dimensional cultures. In addition, the hydrogel has the ability to induce chondrogenic differentiation of stem cells and induce M2 differentiation of macrophages. The hydrogel loaded with peripheral blood mesenchymal stem cells can repair cartilage defects in the knee joints of New Zealand rabbits and the newly formed cartilage was identified as type II collagen. Overall, this newly developed system could provide a new treatment option for repairing cartilage defects. Impact Statement In this study, poly(3-hydroxybutyrate-co-3-hydroxyvalerate-co-3-hydroxyhexanoate) was modified with hyaluronic acid and kartogenin to synthesize a thermosensitive injectable hydrogel scaffold. The scaffold has anti-inflammatory and cartilage-promoting effects. This study used the scaffold to carry peripheral blood mesenchymal stem cells to repair cartilage defects in rabbit knee joints, providing a new idea for the treatment of cartilage defects.
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Affiliation(s)
- Beini Mao
- Department of Rehabilitation Medicine, Shenzhen Hospital, Southern Medical University, Shenzhen City, People's Republic of China
- International Sports Medicine and Rehabilitation Center, Shenzhen Hospital, Southern Medical University, Shenzhen City, People's Republic of China
- Department of Occupational Therapy, School of Rehabilitation Sciences, Southern Medical University, Shenzhen City, People's Republic of China
- Department of Orthopedics, Orthopedic Research Institute, West China Hospital, Sichuan University, Chengdu, People's Republic of China
| | - Ming Tian
- Civil Aviation General Hospital, Chaoyang District, Beijing, People's Republic of China
| | - Yuling Yin
- Department of Orthopedics, Orthopedic Research Institute, West China Hospital, Sichuan University, Chengdu, People's Republic of China
| | - Lang Li
- Department of Orthopedics, Orthopedic Research Institute, West China Hospital, Sichuan University, Chengdu, People's Republic of China
| | - Jian Li
- Department of Orthopedics, Orthopedic Research Institute, West China Hospital, Sichuan University, Chengdu, People's Republic of China
| | - Daixu Wei
- Clinical Medical College and Affiliated Hospital of Chengdu University, Chengdu University, Chengdu, People's Republic of China
| | - Weili Fu
- Department of Orthopedics, Orthopedic Research Institute, West China Hospital, Sichuan University, Chengdu, People's Republic of China
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5
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Wang K, M Hobby A, Chio A, E El Mashad H, Zhang R. Bioconversion of dairy co-products to polyhydroxyalkanoates by halophilic microbes with salts and nutrients recycling. BIORESOURCE TECHNOLOGY 2025; 424:132228. [PMID: 39984002 DOI: 10.1016/j.biortech.2025.132228] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/02/2024] [Revised: 12/23/2024] [Accepted: 02/13/2025] [Indexed: 02/23/2025]
Abstract
This study presented the cultivation of Haloferax mediterranei for polyhydroxyalkanoates (PHA) production from dairy co-products with spent salts recycling and provided the first insights of dissolved oxygen (DO) in regulating PHA biosynthesis by halophiles. PHA had yields up to 0.40 ± 0.02 g/g substrate from whey sugar and up to 0.17 ± 0.12 g/g substrate from delactosed permeate. A higher log-phase DO led to faster biosynthesis, but a lower final PHA production (2.0 ± 0.3 g/L) compared to lower DO levels (3.0 ± 0.1 g/L). This was later elucidated through mathematical modelling by the kinetic parameters and metabolic reaction rates. A novel approach was established to recycle up to 90 % salts and nutrients in the system and achieved consistent production and product quality. This study develops a sustainable biotechnology of converting dairy co-products to biomaterials, improve the economics of PHA and has the potential scalability for industrial applications.
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Affiliation(s)
- Ke Wang
- Department of Food Science, Cornell AgriTech, Cornell University, 665 W North Street, Geneva, NY 14456, United States.
| | - Alex M Hobby
- Biological and Agricultural Engineering Department, University of California Davis, One Shields Avenue, Davis, CA 95616, United States.
| | - Allan Chio
- Biological and Agricultural Engineering Department, University of California Davis, One Shields Avenue, Davis, CA 95616, United States.
| | - Hamed E El Mashad
- Biological and Agricultural Engineering Department, University of California Davis, One Shields Avenue, Davis, CA 95616, United States.
| | - Ruihong Zhang
- Biological and Agricultural Engineering Department, University of California Davis, One Shields Avenue, Davis, CA 95616, United States.
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6
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Tyubaeva PM, Varyan IA, Gasparyan KG, Romanov RR, Pozdnyakov AS, Morokov ES, Kolesnikov EA, Podmasterev VV, Popov AA. Influence of the ozone treatment on the environmental degradation of poly-3-hydroxybutyrate. Int J Biol Macromol 2025; 306:141474. [PMID: 40020801 DOI: 10.1016/j.ijbiomac.2025.141474] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/25/2024] [Revised: 01/11/2025] [Accepted: 02/24/2025] [Indexed: 03/03/2025]
Abstract
The effect of oxidation on the structure and properties of polyesters remains an urgent issue due to the prospects for regulating the stability of the polymer and modifying its surface. The available data on the effect of ozone on the structure and properties of poly-3-hydroxybutyrate (PHB), in particular on the rate of its destruction, are contradictory. So, the purpose of the work was to study the effect of ozone oxidation on structure and properties of PHB to find the impact of the ozone treatment on controlling the rate of the biodegradation in environmental conditions. The surface of PHB films was modified using ozone treatment to accelerate its biodegradation rate in soil. The essence of ozonation is in the accumulation of various oxygen-containing functional groups, which leads to increased intermolecular interaction of PHB chains, which leads to the hardening of the surface. It was shown that the ozone treatment of the surface slowed down the diffusion of destructors to the volume of the PHB and prevented the fragmentation of the film. In addition, the strength of the films after 5 h of ozonation increased from 25 to 42 MPa, but the wetting angle did not change and no significant change in the surface crystallinity were detected before the soil exposure of the films. The soil burial test showed an approximately 1.5-fold decrease in the biodegradation rate for the ozone-treated sample. This study demonstrated that the surface morphology created by ozone treatment formed a unique outer layer of a new morphology. Ozonated PHB films were more resistant to fragmentation and remained stable in the soil for 300 days, while the control sample of PHB completely decomposed in 240 days. The paper discusses the causes and consequences of these observations and the role of ozone treatment for the modification of PHB surface. The results obtained can be used to control the rate of degradation and to predict the behavior of sterilized products in the field of packaging, medical products, and products with a limited service life due to the understanding of mechanism of surface modification.
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Affiliation(s)
- Polina M Tyubaeva
- Academic Department of Technology and Chemistry of Innovative Materials, Plekhanov University of Economics, Stremyanny per. 36, Moscow 117997, Russian Federation; Department of Biological and Chemical Physics of Polymers, Emanuel Institute of Biochemical Physics, Russian Academy of Sciences, Kosygina st. 4, Moscow 119334, Russian Federation.
| | - Ivetta A Varyan
- Academic Department of Technology and Chemistry of Innovative Materials, Plekhanov University of Economics, Stremyanny per. 36, Moscow 117997, Russian Federation; Department of Biological and Chemical Physics of Polymers, Emanuel Institute of Biochemical Physics, Russian Academy of Sciences, Kosygina st. 4, Moscow 119334, Russian Federation
| | - Kristina G Gasparyan
- Academic Department of Technology and Chemistry of Innovative Materials, Plekhanov University of Economics, Stremyanny per. 36, Moscow 117997, Russian Federation; Department of Biological and Chemical Physics of Polymers, Emanuel Institute of Biochemical Physics, Russian Academy of Sciences, Kosygina st. 4, Moscow 119334, Russian Federation
| | - Roman R Romanov
- Academic Department of Technology and Chemistry of Innovative Materials, Plekhanov University of Economics, Stremyanny per. 36, Moscow 117997, Russian Federation; Department of Biological and Chemical Physics of Polymers, Emanuel Institute of Biochemical Physics, Russian Academy of Sciences, Kosygina st. 4, Moscow 119334, Russian Federation
| | - Alexander S Pozdnyakov
- A.E. Favorsky Irkutsk Institute of Chemistry, Siberian Branch, Russian Academy of Sciences, 664033 Irkutsk, Russia
| | - Egor S Morokov
- Department of Biological and Chemical Physics of Polymers, Emanuel Institute of Biochemical Physics, Russian Academy of Sciences, Kosygina st. 4, Moscow 119334, Russian Federation
| | - Evgeny A Kolesnikov
- Department of Functional Nanosystems and High-Temperature Materials, National University of Science and Technology (MISIS), 119991 Moscow, Russia
| | - Vyacheslav V Podmasterev
- Department of Biological and Chemical Physics of Polymers, Emanuel Institute of Biochemical Physics, Russian Academy of Sciences, Kosygina st. 4, Moscow 119334, Russian Federation
| | - Anatoly A Popov
- Academic Department of Technology and Chemistry of Innovative Materials, Plekhanov University of Economics, Stremyanny per. 36, Moscow 117997, Russian Federation; Department of Biological and Chemical Physics of Polymers, Emanuel Institute of Biochemical Physics, Russian Academy of Sciences, Kosygina st. 4, Moscow 119334, Russian Federation
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7
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Xu T, Li H, Zhang S, Xue Q, Hewage R, Wang J, Guo F, Zhao D, Ai G, Kahramon D, Xiang H, Han J. Production of polyhydroxybutyrate from wheat straw hydrolysate using a low-salt requiring and alkaliphilic Halomonas nigrificans X339 under non-sterile open condition. BIORESOURCE TECHNOLOGY 2025; 424:132276. [PMID: 39986623 DOI: 10.1016/j.biortech.2025.132276] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/19/2024] [Revised: 02/10/2025] [Accepted: 02/19/2025] [Indexed: 02/24/2025]
Abstract
Utilizing agricultural waste is a sustainable approach to reduce the production cost of bio-based products. Here, we report a novel haloalkaliphilic strain, Halomonas nigrificans X339, which exhibits an exceptional ability to utilize various low-cost carbon sources. Compared to other halophiles, X339 could be cultivated at an optimal salinity as low as 2 % (w/v). X339 accumulated extraordinarily large granules of polyhydroxybutyrate (PHB). In open batch fermentation, X339 produced 5.11 g/L of PHB from wheat straw hydrolysate (WSH) at 3 % salinity and pH 9, with a PHB/carbon source conversion rate of 0.30 g/g. This represents the highest PHB yield reported from straw hydrolysates in shake-flask fermentation by halophiles. Additionally, whole genome of X339 was sequenced to identify candidate genes related to carbon source utilization. Our findings will benefit researchers in developing a suitable chassis for Next Generation Industrial Biotechnology, and offer a sustainable and eco-friendly solution for bio-based products.
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Affiliation(s)
- Tong Xu
- State Key Laboratory of Microbial Diversity and Innovative Utilization, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, People's Republic of China.
| | - Hao Li
- State Key Laboratory of Microbial Diversity and Innovative Utilization, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, People's Republic of China; College of Life Science, Shandong Normal University, Jinan 250014, People's Republic of China.
| | - Shengjie Zhang
- State Key Laboratory of Microbial Diversity and Innovative Utilization, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, People's Republic of China.
| | - Qiong Xue
- State Key Laboratory of Microbial Diversity and Innovative Utilization, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, People's Republic of China.
| | - Richard Hewage
- State Key Laboratory of Microbial Diversity and Innovative Utilization, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, People's Republic of China; International College, University of Chinese Academy of Sciences, Beijing 100049, People's Republic of China.
| | - Jinhong Wang
- State Key Laboratory of Microbial Diversity and Innovative Utilization, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, People's Republic of China; College of Life Science, University of Chinese Academy of Sciences, Beijing 100049, People's Republic of China.
| | - Feng Guo
- State Key Laboratory of Microbial Diversity and Innovative Utilization, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, People's Republic of China; College of Life Science, Yunnan University, Kunming 650504, People's Republic of China.
| | - Dahe Zhao
- State Key Laboratory of Microbial Diversity and Innovative Utilization, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, People's Republic of China.
| | - Guomin Ai
- State Key Laboratory of Microbial Diversity and Innovative Utilization, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, People's Republic of China.
| | - Davranov Kahramon
- Institute of Microbiology of the Academy of Sciences of the Republic of Uzbekistan, Tashkent 100128, Republic of Uzbekistan.
| | - Hua Xiang
- State Key Laboratory of Microbial Diversity and Innovative Utilization, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, People's Republic of China; College of Life Science, University of Chinese Academy of Sciences, Beijing 100049, People's Republic of China.
| | - Jing Han
- State Key Laboratory of Microbial Diversity and Innovative Utilization, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, People's Republic of China; College of Life Science, University of Chinese Academy of Sciences, Beijing 100049, People's Republic of China.
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8
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Garrido-Miranda KA, Gonzalez ME, Hernandez-Montelongo J, Jaramillo A, Oñate A, Burgos-Díaz C, Manso-Silvan M. Poly(3-hydroxybutyrate)/Clay/Essential Oils Bionanocomposites Incorporating Biochar: Thermo-Mechanical and Antioxidant Properties. Polymers (Basel) 2025; 17:1157. [PMID: 40362941 PMCID: PMC12073600 DOI: 10.3390/polym17091157] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/20/2025] [Revised: 03/14/2025] [Accepted: 03/18/2025] [Indexed: 05/15/2025] Open
Abstract
The use of biodegradable active materials is being explored as a strategy to reduce food loss and waste. The aim is to extend the shelf life of food and to ensure biodegradation when these materials are discarded. The utilization of biodegradable polymers remains limited due to their inherent properties and cost-effectiveness. An alternative approach involves the fabrication of bionanocomposites, which offer a potential solution to address these challenges. Therefore, this study investigates the production of a polyhydroxybutyrate/biochar/clay/essential oil (Tepa:Eugenol) bionanocomposite with antioxidant and antimicrobial properties. The morphological, physicochemical, and antioxidant properties of the materials were evaluated in comparison to those of the original PHB. The materials obtained showed a porous surface with cavities, associated with the presence of biochar. It was also determined that it presented an intercalated-exfoliated morphology by XRD. Thermal properties showed minor improvements over those of PHB, indicating that the components did not substantially influence properties such as crystallization temperature, decomposition temperature, or degree of crystallinity; the melting temperature decreased up to 11%. In addition, the PHB/biochar_7/MMT-OM_3/EO_3 bionanocomposites showed a tendency toward hydrophobicity and the highest elastic modulus with respect to PHB. Finally, all essential-oil-loaded bionanocomposites exhibited excellent antioxidant properties against DPPH and ABTS radicals. The results highlight the potential of these bionanocomposites for the development of antioxidant active packaging.
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Affiliation(s)
- Karla A. Garrido-Miranda
- Scientific and Technological Bioresource Nucleus (BIOREN-UFRO), Universidad de La Frontera, Temuco 4780000, Chile
| | - María Eugenia Gonzalez
- Center of Waste Management and Bioenergy-BIOREN, Universidad de La Frontera, Francisco Salazar 01145, Temuco 4780000, Chile;
| | | | - Andrés Jaramillo
- Department of Mechanical Engineering, Universidad de La Frontera, Francisco Salazar 01145, Temuco 4780000, Chile;
- Departamento de Ingeniería Mecánica, Universidad de Córdoba, Cr 6 #76-103, Montería 230002, Colombia
| | - Angelo Oñate
- Department of Materials Engineering (DIMAT), Faculty of Engineering, Universidad de Concepción, 315 Edmundo Larenas, Concepción 4070415, Chile;
| | - César Burgos-Díaz
- Agriaquaculture Nutritional Genomic Center, CGNA, Temuco 4780000, Chile;
| | - Miguel Manso-Silvan
- Departamento de Física Aplicada and Instituto de Ciencia de Materiales Nicolás Cabrera, Universidad Autónoma de Madrid, 28049 Madrid, Spain;
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9
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Tyara Simbara A, Faridatul Habibah F, Hertadi R. Rhamnolipid-Modified PHB-Ectoine Nanoparticles for Multifunctional Skin Protection Against UVB, Irritation, and Bacteria. ACS OMEGA 2025; 10:12200-12213. [PMID: 40191376 PMCID: PMC11966311 DOI: 10.1021/acsomega.4c10583] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 11/21/2024] [Revised: 02/14/2025] [Accepted: 02/20/2025] [Indexed: 04/09/2025]
Abstract
Rhamnolipid, poly(R)-3-hydroxybutyrate (PHB), and ectoine are sustainable compounds produced by specific bacteria known for their protective benefits, including promoting skin health in applications, such as facial wash, sunscreens, and moisturizers. These compounds have been extensively studied due to their unique physicochemical properties and biocompatibility. Leveraging these beneficial properties, this study aimed to create a multifunctional protective formulation by synthesizing nanoparticles from PHB and ectoine, which are acknowledged for their anti-ultraviolet B (UVB) and anti-irritation properties. The covalent bonding of PHB and ectoine was achieved using 1-ethyl-3-(3-dimethylaminopropyl)carbodiimide (EDC), and the nanoparticles were produced through centrifugation. The synthesized nanoparticle (PHB-ectoine NPs) was physicochemically characterized and tested for anti-irritation and anti-UVB properties in vitro. The characterization revealed a homogeneous spherical shape with a distinct layered structure, primarily composed of carbon and oxygen. The PHB-ectoine NPs measured 527 ± 228 nm in size, had a zeta potential of -61.47 ± 0.64 mV, and exhibited notably higher anti-irritant and anti-UVB activities compared to PHB alone, by over 10 and 4 times, respectively. Furthermore, the addition of a rhamnolipid solution as a dispersant provided the nanofluid with antibacterial properties againstStaphylococcus aureus. These results indicate that the rhamnolipid-PHB-ectoine nanoformulation shows significant potential as a multifunctional skin protective agent with anti-irritation, anti-UVB, and antibacterial capabilities.
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Affiliation(s)
- Alma Tyara Simbara
- Biochemistry and Biomolecular
Engineering Research Division, Faculty of Mathematics and Natural
Sciences, Bandung Institute of Technology, Jl. Ganesa No.10, Bandung 40132, Indonesia
| | - Fera Faridatul Habibah
- Biochemistry and Biomolecular
Engineering Research Division, Faculty of Mathematics and Natural
Sciences, Bandung Institute of Technology, Jl. Ganesa No.10, Bandung 40132, Indonesia
| | - Rukman Hertadi
- Biochemistry and Biomolecular
Engineering Research Division, Faculty of Mathematics and Natural
Sciences, Bandung Institute of Technology, Jl. Ganesa No.10, Bandung 40132, Indonesia
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10
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Kalia VC, Singh RV, Gong C, Lee JK. Toward Sustainable Polyhydroxyalkanoates: A Next-Gen Biotechnology Approach. Polymers (Basel) 2025; 17:853. [PMID: 40219244 PMCID: PMC11991626 DOI: 10.3390/polym17070853] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/28/2025] [Revised: 03/19/2025] [Accepted: 03/20/2025] [Indexed: 04/14/2025] Open
Abstract
Polyhydroxyalkanoates (PHAs) are biodegradable biopolymers synthesized by microorganisms and serve as sustainable alternatives to petroleum-based plastics. While traditional PHA production relies on refined carbon sources and pure cultures, high costs and scalability challenges limit commercial viability. Extremophiles, particularly halophiles, have emerged as promising candidates for cost-effective, large-scale production of PHAs. Their ability to thrive in extreme environments reduces contamination risks, minimizes the need for sterilization, and lowers operational costs. Advancements in metabolic engineering, synthetic biology, and CRISPR-based genome editing have enhanced PHA yields by optimizing metabolic flux and cell morphology. Additionally, utilizing alternative feedstocks such as biowaste, syngas, methane, and CO₂ improves economic feasibility. Next-generation industrial biotechnology integrates extremophilic microbes with AI-driven fermentation and eco-friendly downstream processing to enhance scalability. Industrial-scale production of PHAs using Halomonas spp. and other extremophiles demonstrates significant progress toward commercialization, paving the way for sustainable biopolymer applications in reducing plastic pollution.
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Affiliation(s)
- Vipin Chandra Kalia
- Department of Chemical Engineering, Konkuk University, 120 Neungdong-ro, Gwangjin-gu, Seoul 05029, Republic of Korea; (V.C.K.); (R.V.S.)
| | - Rahul Vikram Singh
- Department of Chemical Engineering, Konkuk University, 120 Neungdong-ro, Gwangjin-gu, Seoul 05029, Republic of Korea; (V.C.K.); (R.V.S.)
| | - Chunjie Gong
- Cooperative Innovation Center of Industrial Fermentation (Ministry of Education & Hubei Province), Key Laboratory of Fermentation Engineering (Ministry of Education), National “111” Center for Cellular Regulation and Molecular Pharmaceutics, Hubei University of Technology, Wuhan 430068, China;
| | - Jung-Kul Lee
- Department of Chemical Engineering, Konkuk University, 120 Neungdong-ro, Gwangjin-gu, Seoul 05029, Republic of Korea; (V.C.K.); (R.V.S.)
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11
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Hazer B, Keleş Ö. Comparison of the Macro Chain Transfer Agent and the Macro Azo Initiator Based on the Poly(3-hydroxy Butyrate) in the Polymerization Kinetics of Methyl Methacrylate. ACS OMEGA 2025; 10:6814-6826. [PMID: 40028143 PMCID: PMC11866209 DOI: 10.1021/acsomega.4c08996] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/01/2024] [Revised: 01/21/2025] [Accepted: 01/29/2025] [Indexed: 03/05/2025]
Abstract
Poly(3-hydroxybutyrate) (PHB) derivatives are attractive for sustainable polymer production, yet their role in controlling radical polymerization kinetics remains underexplored. In this study, we compare the polymerization kinetics of methyl methacrylate (MMA) using two PHB-based macroinitiators: a macro chain transfer agent (PHB-macro reversible addition-fragmentation chain transfer (RAFT)) and a macroazo initiator (PHBai). RAFT polymerizations (PHB-R-PMMA) were conducted at 70 °C with PHB-macro RAFT in the presence of 2,2'-azobis(isobutyronitrile), while conventional free radical polymerizations (PHBaiPMMA) were carried out using PHBai under identical conditions. The RAFT system exhibited a slightly lower overall rate constant (k = 1.11 × 10-4 L/mol·s) compared to the azo-initiated system (k = 1.28 × 10-4 L/mol·s). Both systems showed a gradual decrease in the PHB content over time, indicating effective copolymer formation with increasing MMA incorporation. Activation energies for PHB-macro RAFT and PHBai were calculated as 0.88 and 1.05 kJ/mol, respectively, demonstrating RAFT's superior control over molecular architecture. The resulting PHB-PMMA block copolymers offer promising applications in orthopedic surgery (e.g., bone cements), packaging, medical implants, drug delivery, and dental materials. This study provides the first direct comparison of PHB-based macro RAFT and azo systems for MMA polymerization, highlighting RAFT's advantage in achieving controlled polymer architectures and expanding biomedical and industrial utility.
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Affiliation(s)
- Baki Hazer
- Department
of Aircraft Airframe Engine Maintenance, Kapadokya University, Ürgüp, Nevşehir 50420, Turkey
- Department
of Chemistry, Bülent Ecevit University, 67100 Zonguldak, Turkey
| | - Özgür Keleş
- Department
of Mechanical Engineering and Engineering Science, University of North Carolina at Charlotte, Charlotte, North Carolina 28223, United States
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12
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Xie H, Zhong K, Niu S, Li X, Hu Z, Xiao G, Huang Y, Zhang H, Liu Y, Zhang H, Cai Q. Air-Mediated Biomimetic Synthesis of Polyhydroxyalkanoate with C4 Diol. Angew Chem Int Ed Engl 2025; 64:e202417660. [PMID: 39714430 DOI: 10.1002/anie.202417660] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/13/2024] [Revised: 12/06/2024] [Accepted: 12/17/2024] [Indexed: 12/24/2024]
Abstract
Poly(4-hydroxybutyrate) (P4HB) is a high-performance, well-recyclable, and biodegradable polyhydroxyalkanoate (PHA). However, conventional bioproduction of homopolymeric P4HB involves complex and costly processes with C4 feedstocks, particularly 1,4-butanediol (BDO), and enzyme-coenzyme systems in genetically engineered bacteria. An alternative extracellular chemical route utilizing aerial oxidation of BDO offers cost and energy benefits but struggle with conversion efficiency. Inspired by efficient intracellular oxidation of primary alcohols, we propose a ruthenium-phosphine synergistic catalytic system that mimics enzyme-coenzyme functionality. This system effectively catalyzed the air-mediated, solvent-free oxidation of BDO to produce γ-butyrolactone (γ-BL) and oligomeric P4HB, with a space-time yield (10.37 g [γ-BL unit] g-1 catalyst h-1) surpassing the values (<5.5) of previous approaches. The oligomer-containing products were reversibly converted to γ-BL and then to P4HB (28.9 kDa) via ring-opening polymerization, exceeding reported values (<16 kDa). This study provides the potential for large-scale synthesis of high-value PHAs from diverse non-grain-based diols, offering economic and environmental advantages.
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Affiliation(s)
- Huilin Xie
- Advanced Functional Materials Research Center, Chemistry and Chemical Engineering Guangdong Laboratory, 515031, Shantou, China
- College of Chemistry and Chemical Engineering, Shantou University, 515063, Shantou, China
| | - Kaibin Zhong
- "New Chemical Engineering" Comprehensive Research Platform, Chemistry and Chemical Engineering Guangdong Laboratory, 515031, Shantou, China
| | - Shihao Niu
- State Key Laboratory of Biobased Fiber Manufacturing Technology, Zhejiang Sci-Tech University, 310018, Hangzhou, China
| | - Xiaoxu Li
- Advanced Functional Materials Research Center, Chemistry and Chemical Engineering Guangdong Laboratory, 515031, Shantou, China
| | - Zexu Hu
- Advanced Functional Materials Research Center, Chemistry and Chemical Engineering Guangdong Laboratory, 515031, Shantou, China
| | - Guang Xiao
- Advanced Functional Materials Research Center, Chemistry and Chemical Engineering Guangdong Laboratory, 515031, Shantou, China
| | - Yifu Huang
- College of Chemistry and Chemical Engineering, Shantou University, 515063, Shantou, China
| | - Hongjie Zhang
- State Key Laboratory of Biobased Fiber Manufacturing Technology, Zhejiang Sci-Tech University, 310018, Hangzhou, China
| | - Yuan Liu
- "New Chemical Engineering" Comprehensive Research Platform, Chemistry and Chemical Engineering Guangdong Laboratory, 515031, Shantou, China
| | - Hefeng Zhang
- College of Chemistry and Chemical Engineering, Shantou University, 515063, Shantou, China
| | - Qiuquan Cai
- Advanced Functional Materials Research Center, Chemistry and Chemical Engineering Guangdong Laboratory, 515031, Shantou, China
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13
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Huang HY, Ren BH, Xie M, Huang YT, Li K, Cai Z, Lu XB, Zhu JB. Access to Polyhydroxyalkanoates with Diverse Syndiotacticity via Polymerization by Spiro-Salen Complexes and Insights into the Stereocontrol Mechanism. Angew Chem Int Ed Engl 2025; 64:e202419494. [PMID: 39714575 DOI: 10.1002/anie.202419494] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/09/2024] [Revised: 11/27/2024] [Accepted: 12/17/2024] [Indexed: 12/24/2024]
Abstract
Polyhydroxyalkanoates (PHAs) have attracted broad interest as promising sustainable materials to address plastic pollution and resource scarcity. However, the chemical synthesis of stereoregular PHAs via ring-opening polymerization (ROP) has long been an elusive endeavor. In this contribution, we exploited a robust spiro-salen yttrium complex (Y3) as the catalyst to successfully prepare syndiotactic PHAs with diverse pendent groups. Simply altering the ratio of enantiomeric catalysts allowed to access of PHAs with diverse syndiotacticity (Pr=0.5-0.99, from sticky oil to tough materials), delivering tunable thermal properties (glass transition temperature, Tg from -52 to 70 °C and melting transition temperature, Tm from 38 to 223 °C). A combined experimental and computational study suggested a polymeric exchange mechanism could boost the polymerization activity and control the syndioselectivity.
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Affiliation(s)
- Hao-Yi Huang
- National Engineering Laboratory of Eco-Friendly Polymeric Materials (Sichuan) College of Chemistry, Sichuan University, 29 Wangjiang Rd, Chengdu, 610064, P. R. China
| | - Bai-Hao Ren
- State Key Laboratory of Fine Chemicals, Dalian University of Technology, Dalian, 116024, P. R. China
| | - Min Xie
- National Engineering Laboratory of Eco-Friendly Polymeric Materials (Sichuan) College of Chemistry, Sichuan University, 29 Wangjiang Rd, Chengdu, 610064, P. R. China
| | - Yu-Ting Huang
- National Engineering Laboratory of Eco-Friendly Polymeric Materials (Sichuan) College of Chemistry, Sichuan University, 29 Wangjiang Rd, Chengdu, 610064, P. R. China
| | - Kun Li
- National Engineering Laboratory of Eco-Friendly Polymeric Materials (Sichuan) College of Chemistry, Sichuan University, 29 Wangjiang Rd, Chengdu, 610064, P. R. China
| | - Zhongzheng Cai
- National Engineering Laboratory of Eco-Friendly Polymeric Materials (Sichuan) College of Chemistry, Sichuan University, 29 Wangjiang Rd, Chengdu, 610064, P. R. China
| | - Xiao-Bing Lu
- State Key Laboratory of Fine Chemicals, Dalian University of Technology, Dalian, 116024, P. R. China
| | - Jian-Bo Zhu
- National Engineering Laboratory of Eco-Friendly Polymeric Materials (Sichuan) College of Chemistry, Sichuan University, 29 Wangjiang Rd, Chengdu, 610064, P. R. China
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14
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Kuang M, Li B, Zhou L, Huang Z, Wu J, Wang S, Yang J. Carbon Dioxide Upgrading to Biodegradable Plastics through Photo/Electro-Synthetic Biohybrid Systems. Angew Chem Int Ed Engl 2025; 64:e202422357. [PMID: 39790053 DOI: 10.1002/anie.202422357] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/17/2024] [Indexed: 01/12/2025]
Abstract
The escalating emissions of anthropogenic carbon dioxide (CO2) and the pervasive issue of nondegradable plastic pollution underscore dual urgent challenges in pursuit of a sustainable society. Achieving such sustainability in the plastic industry, while effectively addressing these environmental concerns, necessitates the development and implementation of innovative strategies for the synthesis of biodegradable polymers utilizing CO2 as feedstocks. The technologies not only facilitate the mitigation of elevated atmospheric CO2 concentrations but also introduce a renewable carbon resource for polymer manufacturing. While considerable research has been undertaken in CO2 upgrading to various C1-3 products, the production of biodegradable polymers from CO2 remains a formidable challenge. Here, we delineate the principal methodologies for catalytic CO2 upgrading to biodegradable polymers, encompassing photocatalytic-biological processes and electrocatalytic-biological approaches. The emphasis of this perspective is on the optimization of production processes and catalyst efficiency, which are paramount in addressing the imperative challenge of decarbonization in the plastic industry, thereby aligning with global environmental sustainability goals.
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Affiliation(s)
- Min Kuang
- State Key Laboratory for Modification of Chemical Fibers and Polymer Materials, College of Materials Science and Engineering, Donghua University, Shanghai, 201620, China
| | - Bingbing Li
- State Key Laboratory for Modification of Chemical Fibers and Polymer Materials, College of Materials Science and Engineering, Donghua University, Shanghai, 201620, China
| | - Linjiao Zhou
- State Key Laboratory for Modification of Chemical Fibers and Polymer Materials, College of Materials Science and Engineering, Donghua University, Shanghai, 201620, China
| | - Zichao Huang
- State Key Laboratory for Modification of Chemical Fibers and Polymer Materials, College of Materials Science and Engineering, Donghua University, Shanghai, 201620, China
| | - Jing Wu
- Co-Innovation Center for Textile Industry, Innovation Center for Textile Science and Technology, Donghua University, Shanghai, 201620, China
| | - Shaobin Wang
- School of Chemical Engineering, The University of Adelaide, Adelaide, SA, 5005, Australia
| | - Jianping Yang
- State Key Laboratory for Modification of Chemical Fibers and Polymer Materials, College of Materials Science and Engineering, Donghua University, Shanghai, 201620, China
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15
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Zhang Z, Quinn EC, Kenny JK, Grigoropoulos A, DesVeaux JS, Chen T, Zhou L, Xu T, Beckham GT, Chen EYX. Stereomicrostructure-regulated biodegradable adhesives. Science 2025; 387:297-303. [PMID: 39818898 DOI: 10.1126/science.adr7175] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/14/2024] [Accepted: 12/10/2024] [Indexed: 01/19/2025]
Abstract
Commercial adhesives are petroleum-based thermoset networks or nonbiodegradable thermoplastic hot melts, making them ideal targets for replacement by biodegradable alternatives. Poly(3-hydroxybutyrate) (P3HB) is a biorenewable and biodegradable alternative to conventional plastics, but microbial P3HB, which has a stereoperfect stereomicrostructure, exhibits no adhesion. In this study, by elucidating the fundamental relationship between chemocatalytically engineered P3HB stereomicrostructures and adhesion properties, we found that biodegradable syndio-rich P3HB exhibits high adhesion strength and outperforms common commercial adhesives, whereas syndiotactic, isotactic, or iso-rich P3HB shows no measurable adhesion. The syndio-rich stereomicrostructure brings about desired thermomechanical and viscoelastic properties of P3HB that enable strong adhesion to a range of substrates tested, including aluminum, steel, glass, and wood, and its performance is insensitive to molar mass and reprocessing or reuse.
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Affiliation(s)
- Zhen Zhang
- Department of Chemistry, Colorado State University, Fort Collins, CO, USA
| | - Ethan C Quinn
- Department of Chemistry, Colorado State University, Fort Collins, CO, USA
| | - Jacob K Kenny
- Renewable Resources and Enabling Sciences Center, National Renewable Energy Laboratory, Golden, CO, USA
- BOTTLE Consortium, Golden, CO, USA
| | - Alexandra Grigoropoulos
- Department of Materials Science and Engineering, University of California, Berkeley, Berkeley, CA, USA
| | - Jason S DesVeaux
- Renewable Resources and Enabling Sciences Center, National Renewable Energy Laboratory, Golden, CO, USA
- BOTTLE Consortium, Golden, CO, USA
| | - Tiffany Chen
- Department of Chemistry, University of California, Berkeley, Berkeley, CA, USA
- Materials Science Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA
- Kavli Energy NanoScience Institute, Berkeley, CA, USA
| | - Li Zhou
- Department of Chemistry, Colorado State University, Fort Collins, CO, USA
| | - Ting Xu
- Department of Materials Science and Engineering, University of California, Berkeley, Berkeley, CA, USA
- Department of Chemistry, University of California, Berkeley, Berkeley, CA, USA
- Materials Science Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA
- Kavli Energy NanoScience Institute, Berkeley, CA, USA
| | - Gregg T Beckham
- Renewable Resources and Enabling Sciences Center, National Renewable Energy Laboratory, Golden, CO, USA
- BOTTLE Consortium, Golden, CO, USA
| | - Eugene Y-X Chen
- Department of Chemistry, Colorado State University, Fort Collins, CO, USA
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16
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Lalonde JN, Pilania G, Marrone BL. Materials designed to degrade: structure, properties, processing, and performance relationships in polyhydroxyalkanoate biopolymers. Polym Chem 2025; 16:235-265. [PMID: 39464417 PMCID: PMC11498330 DOI: 10.1039/d4py00623b] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/07/2024] [Accepted: 10/05/2024] [Indexed: 10/29/2024]
Abstract
Conventional plastics pose significant environmental and health risks across their life cycle, driving intense interest in sustainable alternatives. Among these, polyhydroxyalkanoates (PHAs) stand out for their biocompatibility, degradation characteristics, and diverse applications. Yet, challenges like production cost, scalability, and limited chemical variety hinder their widespread adoption, impacting material selection and design. This review examines PHA research through the lens of the classical materials tetrahedron, exploring property-structure-processing-performance (PSPP) relationships. By analyzing recent literature and addressing current limitations, we gain valuable insights into PHA development. Despite challenges, we remain optimistic about the role of PHAs in transitioning towards a circular plastic economy, emphasizing the need for further research to unlock their full potential.
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Affiliation(s)
- Jessica N Lalonde
- Department of Mechanical Engineering and Materials Science, Duke University Durham NC 27708 USA
- Bioscience Division, Los Alamos National Laboratory Los Alamos NM 87545 USA
| | | | - Babetta L Marrone
- Bioscience Division, Los Alamos National Laboratory Los Alamos NM 87545 USA
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17
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Zhang L, Sun X, Ye J, Yuan Q, Zhang X, Sun F, An Y, Chen Y, Qian Y, Yang D, Wang Q, Gao M, Chen T, Ma H, Chen G, Xie Z. Reconstruction and analyses of genome-scale halomonas metabolic network yield a highly efficient PHA production. Metab Eng Commun 2024; 19:e00251. [PMID: 39655187 PMCID: PMC11626823 DOI: 10.1016/j.mec.2024.e00251] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/25/2024] [Revised: 11/09/2024] [Accepted: 11/11/2024] [Indexed: 12/12/2024] Open
Abstract
In pursuit of reliable and efficient industrial microbes, this study integrates cutting-edge systems biology tools with Halomonas bluephagenesis TD01, a robust halophilic bacterium. We generated the complete and annotated circular genome sequence for this model organism, constructed and meticulously curated a genome-scale metabolic network, achieving striking 86.32% agreement with Biolog Phenotype Microarray data and visualize the network via an interactive Electron/Thrift server architecture. We then analyzed the genome-scale network using vertex sampling analysis (VSA) and found that productions of biomass, polyhydroxyalkanoates (PHA), citrate, acetate, and pyruvate are mutually competing. Recognizing the dynamic nature of H. bluephagenesis TD01, we further developed and implemented the hyper-cube-shrink-analysis (HCSA) framework to predict effects of nutrient availabilities and metabolic reactions in the model on biomass and PHA accumulation. We then, based on the analysis results, proposed and validate multi-step feeding strategies tailored to different fermentation stages. This integrated approach yielded remarkable results, with fermentation culminating in a cell dry weight of 100.4 g/L and 70% PHA content, surpassing previous benchmarks. Our findings exemplify the powerful potential of system-level tools in the design and optimization of industrial microorganisms, paving the way for more efficient and sustainable bio-based processes.
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Affiliation(s)
- Luhui Zhang
- Peking University International Cancer Institute, School of Basic Medical Sciences, Peking University, Beijing, 100191, China
| | - Xinpei Sun
- Peking University International Cancer Institute, School of Basic Medical Sciences, Peking University, Beijing, 100191, China
- Peking University - Yunnan Baiyao International Medical Center, School of Pharmaceutical Science, Peking University, Beijing, 100191, China
| | - Jianwen Ye
- MOE Key Lab of Bioinformatics, Tsinghua-Peking Center for Life Sciences, School of Life Sciences, Tsinghua University, Beijing, 100084, China
| | - QianQian Yuan
- Biodesign Center, Key Laboratory of Engineering Biology for Low-carbon Manufacturing, Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin, 300308, China
| | - Xin Zhang
- Key Laboratory of Systems Bioengineering (Ministry of Education), School of Chemical Engineering and Technology, Tianjin University, Tianjin, China
| | - Fei Sun
- School of Pharmacy, University of Wisconsin Madison, WI, 53705, USA
| | - Yongpan An
- Peking University International Cancer Institute, School of Basic Medical Sciences, Peking University, Beijing, 100191, China
| | - Yutong Chen
- Peking University International Cancer Institute, School of Basic Medical Sciences, Peking University, Beijing, 100191, China
| | - Yuehui Qian
- Peking University International Cancer Institute, School of Basic Medical Sciences, Peking University, Beijing, 100191, China
| | - Daqian Yang
- Peking University International Cancer Institute, School of Basic Medical Sciences, Peking University, Beijing, 100191, China
| | - Qian Wang
- Peking University International Cancer Institute, School of Basic Medical Sciences, Peking University, Beijing, 100191, China
| | - Miaomiao Gao
- Peking University International Cancer Institute, School of Basic Medical Sciences, Peking University, Beijing, 100191, China
| | - Tao Chen
- Key Laboratory of Systems Bioengineering (Ministry of Education), School of Chemical Engineering and Technology, Tianjin University, Tianjin, China
| | - Hongwu Ma
- Biodesign Center, Key Laboratory of Engineering Biology for Low-carbon Manufacturing, Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin, 300308, China
| | - Guoqiang Chen
- MOE Key Lab of Bioinformatics, Tsinghua-Peking Center for Life Sciences, School of Life Sciences, Tsinghua University, Beijing, 100084, China
| | - Zhengwei Xie
- Peking University International Cancer Institute, School of Basic Medical Sciences, Peking University, Beijing, 100191, China
- Peking University - Yunnan Baiyao International Medical Center, School of Pharmaceutical Science, Peking University, Beijing, 100191, China
- Gigaceuticals Co., Ltd, Beijing, 102206, China
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18
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Zhou L, Zhang Z, Sangroniz A, Shi C, Gowda RR, Scoti M, Barange DK, Lincoln C, Beckham GT, Chen EYX. Chain-End Controlled Depolymerization Selectivity in α,α-Disubstituted Propionate PHAs with Dual Closed-Loop Recycling and Record-High Melting Temperature. J Am Chem Soc 2024; 146:29895-29904. [PMID: 39413833 DOI: 10.1021/jacs.4c11920] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2024]
Abstract
Within the large poly(3-hydroxyalkanoate) (PHA) family, C3 propionates are much less studied than C4 butyrates, with the exception of α,α-disubstituted propionate PHAs, particularly poly(3-hydroxy-2,2-dimethylpropionate), P3H(Me)2P, due to its high melting temperature (Tm ∼ 230 °C) and crystallinity (∼76%). However, inefficient synthetic routes to its monomer 2,2-dimethylpropiolactone [(Me)2PL] and extreme brittleness of P3H(Me)2P largely hinder its broad applications. Here, we introduce simple, efficient step-growth polycondensation (SGP) of a hydroxyacid or methyl ester to afford P3H(Me)2P with low to medium molar mass, which is then utilized to produce lactones through base-catalyzed depolymerization. The ring-opening polymerization (ROP) of the 4-membered lactone leads to high-molar-mass P3H(Me)2P, which can be depolymerized by hydrolysis to the hydroxyacid in 99% yield or methanolysis to the hydroxyester in 91% yield, achieving closed-loop recycling via both SGP and ROP routes. Intriguingly, the chain end of the SGP-P3H(Me)2P determines the depolymerization selectivity toward 4- or 12-membered lactone formation, while both can be repolymerized back to P3H(Me)2P. Through the formation of copolymers P3H(Me/R)2P (R = Et, nPr), PHAs with high tensile strength and ductility, coupled with high barriers to water vapor and oxygen, have been created. Notably, the PHA structure-property study led to P3H(nPr)2P with a record-high Tm of 266 °C within the PHA family.
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Affiliation(s)
- Li Zhou
- Department of Chemistry, Colorado State University, Fort Collins, Colorado 80523-1872, United States
| | - Zhen Zhang
- Department of Chemistry, Colorado State University, Fort Collins, Colorado 80523-1872, United States
| | - Ainara Sangroniz
- Department of Chemistry, Colorado State University, Fort Collins, Colorado 80523-1872, United States
- POLYMAT and Department of Polymers and Advanced Materials: Physics, Chemistry and Technology, Faculty of Chemistry, University of the Basque Country UPV/EHU, Paseo Manuel de Lardizábal 3, 20018 Donostia-San Sebastián, Spain
| | - Changxia Shi
- Department of Chemistry, Colorado State University, Fort Collins, Colorado 80523-1872, United States
| | - Ravikumar R Gowda
- Department of Chemistry, Colorado State University, Fort Collins, Colorado 80523-1872, United States
| | - Miriam Scoti
- Department of Chemistry, Colorado State University, Fort Collins, Colorado 80523-1872, United States
- Dipartimento di Scienze Chimiche, Università di Napoli Federico II, Complesso Monte S. Angelo, Via Cintia, 80126 Napoli, Italy
| | - Deepak K Barange
- Department of Chemistry, Colorado State University, Fort Collins, Colorado 80523-1872, United States
| | - Clarissa Lincoln
- Renewable Resources and Enabling Sciences Center, National Renewable Energy Laboratory, Golden, Colorado 80401, United States
- BOTTLE Consortium, Golden, Colorado 80401, United States
| | - Gregg T Beckham
- Renewable Resources and Enabling Sciences Center, National Renewable Energy Laboratory, Golden, Colorado 80401, United States
- BOTTLE Consortium, Golden, Colorado 80401, United States
| | - Eugene Y-X Chen
- Department of Chemistry, Colorado State University, Fort Collins, Colorado 80523-1872, United States
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19
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Holmes EC, Bleem AC, Johnson CW, Beckham GT. Adaptive laboratory evolution and metabolic engineering of Cupriavidus necator for improved catabolism of volatile fatty acids. Metab Eng 2024; 86:S1096-7176(24)00139-3. [PMID: 39490669 DOI: 10.1016/j.ymben.2024.10.011] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/31/2024] [Revised: 10/14/2024] [Accepted: 10/23/2024] [Indexed: 11/05/2024]
Abstract
Bioconversion of high-volume waste streams into value-added products will be an integral component of the growing bioeconomy. Volatile fatty acids (VFAs) (e.g., butyrate, valerate, and hexanoate) are an emerging and promising waste-derived feedstock for microbial carbon upcycling. Cupriavidus necator H16 is a favorable host for conversion of VFAs into various bioproducts due to its diverse carbon metabolism, ease of metabolic engineering, and use at industrial scales. Here, we report that a common strategy to improve product titers in C. necator, deletion of the polyhydroxybutyrate (PHB) biosynthetic operon, results in a significant growth defect on VFA substrates. Using adaptive laboratory evolution, we identify mutations to the regulator gene phaR, the two-component response regulator-histidine kinase pair encoded by H16_A1372/H16_A1373, and the tripartite transporter assembly encoded by H16_A2296-A2298 as causative for improved growth on VFA substrates. Deletion of phaR and H16_A1373 led to significantly reduced NADH abundance accompanied by large changes to expression of genes involved in carbon metabolism, balance of electron carriers, and oxidative stress tolerance that may be responsible for improved growth of these engineered strains. These results provide insight into the role of PHB biosynthesis in carbon and energy metabolism and highlight a key role for the regulator PhaR in global regulatory networks. By combining mutations, we generated platform strains with significant growth improvements on VFAs, which can enable improved conversion of waste-derived VFA substrates to target bioproducts.
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Affiliation(s)
- Eric C Holmes
- Renewable Resources and Enabling Sciences Center, National Renewable Energy Laboratory, Golden, CO, 80401, USA
| | - Alissa C Bleem
- Renewable Resources and Enabling Sciences Center, National Renewable Energy Laboratory, Golden, CO, 80401, USA
| | - Christopher W Johnson
- Renewable Resources and Enabling Sciences Center, National Renewable Energy Laboratory, Golden, CO, 80401, USA
| | - Gregg T Beckham
- Renewable Resources and Enabling Sciences Center, National Renewable Energy Laboratory, Golden, CO, 80401, USA.
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20
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Zheng Z, Wang Z, Zhang X, Zheng C, Xu B, Zhang J, Zhang C, Bie S, Peng F, Wu Y, Wang H, Zhang S, Lv L. Novel genomic and phenotypic traits of polyhydroxyalkanoate-producing bacterium ZZQ-149, the type strain of Halomonas qinghailakensis. BMC Microbiol 2024; 24:372. [PMID: 39342120 PMCID: PMC11438105 DOI: 10.1186/s12866-024-03532-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/16/2024] [Accepted: 09/18/2024] [Indexed: 10/01/2024] Open
Abstract
BACKGROUND Polyhydroxyalkanoates (PHAs) are optimal potential materials for industrial and medical uses, characterized by exceptional sustainability, biodegradability, and biocompatibility. These are primarily from various bacteria and archaea. Bacterial strains with effective PHA formation capabilities and minimal production cost form the foundation for PHA production. Detailed genomic analysis of these PHA-generating bacteria is vital to understand their PHA production pathways and enhance their synthesis capability. RESULTS ZZQ-149, a halophilic, PHA-producing bacterium, was isolated from the sediment of China's Qinghai Lake. Here, we decoded the full genome of ZZQ-149 using Single Molecule Real Time (SMRT) technology based on PacBio RS II platform, coupled with Illumina sequencing platforms. Physiological, chemotaxonomic traits, and phylogenetic analysis based on 16 S rRNA gene and single copy core genes of ninety-nine Halomonas type strains identified ZZQ-149 as the type strain of Halomonas qinghailakensis. Furthermore, a low average nucleotide identity (ANI, < 95%) delineated the genetic differences between ZZQ-149 and other Halomonas species. The ZZQ-149 genome, with a DNA G + C content of 52%, comprises a chromosome (3, 798, 069 bps) and a plasmid (6, 107 bps). The latter encodes the toxin-antitoxin system, BrnT/BrnA. Through comprehensive genome sequencing and analysis, we identified multiple PHA-synthesizing enzymes and an unprecedented combination of eight PHA-synthesizing pathways in ZZQ-149. CONCLUSIONS Being a halophilic, PHA-producing bacterium, ZZQ-149 exhibits potential as a high PHA producer for engineered bacteria via genome editing while ensuring low-cost PHA production through continuous, unsterilized fermentation.
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Affiliation(s)
- Ziqiang Zheng
- School of Life Science and Technology, Wuhan Polytechnic University, Wuhan, 430023, China.
- Wuhan Qianmo Bio-agriculture Technology Co., Ltd., Medicine Garden, Miaoshan Development Zone, Jiangxia District, Wuhan, 430299, China.
- Institute of Plant Protection and Soil Science, Hubei Academy of Agricultural Sciences, Wuhan, 430064, China.
| | - Zuoqian Wang
- Institute of Plant Protection and Soil Science, Hubei Academy of Agricultural Sciences, Wuhan, 430064, China
| | - Xuerui Zhang
- School of Life Science and Technology, Wuhan Polytechnic University, Wuhan, 430023, China
| | - Chaofan Zheng
- School of Life Science and Technology, Wuhan Polytechnic University, Wuhan, 430023, China
| | - Bichao Xu
- Center for Instrumental Analysis and Metrology, Wuhan Institute of Virology, Chinese Academy of Sciences, Wuhan, 430071, China
| | - Jushuang Zhang
- School of Life Science and Technology, Wuhan Polytechnic University, Wuhan, 430023, China
| | - Chengjun Zhang
- Division of Animal Infectious Disease, Huazhong Agricultural University, Wuhan, 430070, China
| | - Siwei Bie
- School of Life Science and Technology, Wuhan Polytechnic University, Wuhan, 430023, China
| | - Fang Peng
- School of Life Science and Technology, Wuhan Polytechnic University, Wuhan, 430023, China
| | - Yuzhen Wu
- School of Life Science and Technology, Wuhan Polytechnic University, Wuhan, 430023, China
| | - Hongxun Wang
- School of Life Science and Technology, Wuhan Polytechnic University, Wuhan, 430023, China
| | - Shu Zhang
- Institute of Plant Protection and Soil Science, Hubei Academy of Agricultural Sciences, Wuhan, 430064, China
| | - Liang Lv
- Institute of Plant Protection and Soil Science, Hubei Academy of Agricultural Sciences, Wuhan, 430064, China
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21
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Santolin L, Riedel SL, Brigham CJ. Synthetic biology toolkit of Ralstonia eutropha (Cupriavidus necator). Appl Microbiol Biotechnol 2024; 108:450. [PMID: 39207499 PMCID: PMC11362209 DOI: 10.1007/s00253-024-13284-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/06/2024] [Revised: 08/09/2024] [Accepted: 08/12/2024] [Indexed: 09/04/2024]
Abstract
Synthetic biology encompasses many kinds of ideas and techniques with the common theme of creating something novel. The industrially relevant microorganism, Ralstonia eutropha (also known as Cupriavidus necator), has long been a subject of metabolic engineering efforts to either enhance a product it naturally makes (polyhydroxyalkanoate) or produce novel bioproducts (e.g., biofuels and other small molecule compounds). Given the metabolic versatility of R. eutropha and the existence of multiple molecular genetic tools and techniques for the organism, development of a synthetic biology toolkit is underway. This toolkit will allow for novel, user-friendly design that can impart new capabilities to R. eutropha strains to be used for novel application. This article reviews the different synthetic biology techniques currently available for modifying and enhancing bioproduction in R. eutropha. KEY POINTS: • R. eutropha (C. necator) is a versatile organism that has been examined for many applications. • Synthetic biology is being used to design more powerful strains for bioproduction. • A diverse synthetic biology toolkit is being developed to enhance R. eutropha's capabilities.
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Affiliation(s)
- Lara Santolin
- Technische Universität Berlin, Institute of Biotechnology, Chair of Bioprocess Engineering, Berlin, Germany
| | - Sebastian L Riedel
- Berliner Hochschule Für Technik, Department VIII - Mechanical Engineering, Event Technology and Process Engineering, Environmental and Bioprocess Engineering Laboratory, Berlin, Germany.
| | - Christopher J Brigham
- Department of Bioengineering, University of Massachusetts Dartmouth, North Dartmouth, MA, USA.
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22
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Heidarian P, Aziz S, Halley PJ, McNally T, Peijs T, Vandi LJ, Varley RJ. Poly(3-Hydroxybutyrate- co-3-Hydroxyvalerate) Self-Reinforced Composites via Solvent-Induced Interfiber Welding of Nanofibers. Biomacromolecules 2024; 25:5039-5047. [PMID: 39041249 DOI: 10.1021/acs.biomac.4c00441] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 07/24/2024]
Abstract
In this study, we explore an approach to enhance the mechanical performance of poly(3-hydroxybutyrate-co-3-hydroxyvalerate) (PHBV) by utilizing the self-reinforcing effect of β-phase-induced PHBV electrospun nanofiber mats. This involves electrospinning combined with low-temperature postspun vapor solvent interfiber welding. Scanning electron microscopy imaging confirmed fiber alignment, while XRD diffraction revealed the presence of both α and β crystalline phases under optimized electrospinning conditions. The resulting composite exhibited significant improvements in mechanical properties attributed to the formation of more perfectly structured α and β polymorphs and enhanced interfacial adhesion of electrospun nanofibers after vapor solvent treatment. This approach offers entirely recyclable and biodegradable materials, presenting the potential for a new family of sustainable bioplastics.
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Affiliation(s)
- Pejman Heidarian
- Carbon Nexus at the Institute for Frontier Materials, Deakin University, Geelong, Victoria 3216, Australia
| | - Shazed Aziz
- School of Chemical Engineering, University of Queensland, St Lucia 4072, Australia
| | - Peter J Halley
- School of Chemical Engineering, University of Queensland, St Lucia 4072, Australia
- Centre for Advanced Materials Processing and Manufacturing AMPAM, The University of Queensland, St Lucia 4072, Australia
| | - Tony McNally
- International Institute for Nanocomposite Manufacturing (IINM), University of Warwick, Coventry CV4 74L, U.K
| | - Ton Peijs
- Materials Engineering Centre, WMG, University of Warwick, Coventry CV4 74L, U.K
| | - Luigi-Jules Vandi
- School of Mechanical and Mining Engineering, University of Queensland, St Lucia 4072, Australia
| | - Russell J Varley
- Carbon Nexus at the Institute for Frontier Materials, Deakin University, Geelong, Victoria 3216, Australia
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23
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Mi CH, Qi XY, Zhou YW, Ding YW, Wei DX, Wang Y. Advances in medical polyesters for vascular tissue engineering. DISCOVER NANO 2024; 19:125. [PMID: 39115796 PMCID: PMC11310390 DOI: 10.1186/s11671-024-04073-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/03/2024] [Accepted: 07/25/2024] [Indexed: 08/11/2024]
Abstract
Blood vessels are highly dynamic and complex structures with a variety of physiological functions, including the transport of oxygen, nutrients, and metabolic wastes. Their normal functioning involves the close and coordinated cooperation of a variety of cells. However, adverse internal and external environmental factors can lead to vascular damage and the induction of various vascular diseases, including atherosclerosis and thrombosis. This can have serious consequences for patients, and there is an urgent need for innovative techniques to repair damaged blood vessels. Polyesters have been extensively researched and used in the treatment of vascular disease and repair of blood vessels due to their excellent mechanical properties, adjustable biodegradation time, and excellent biocompatibility. Given the high complexity of vascular tissues, it is still challenging to optimize the utilization of polyesters for repairing damaged blood vessels. Nevertheless, they have considerable potential for vascular tissue engineering in a range of applications. This summary reviews the physicochemical properties of polyhydroxyalkanoate (PHA), polycaprolactone (PCL), poly-lactic acid (PLA), and poly(lactide-co-glycolide) (PLGA), focusing on their unique applications in vascular tissue engineering. Polyesters can be prepared not only as 3D scaffolds to repair damage as an alternative to vascular grafts, but also in various forms such as microspheres, fibrous membranes, and nanoparticles to deliver drugs or bioactive ingredients to damaged vessels. Finally, it is anticipated that further developments in polyesters will occur in the near future, with the potential to facilitate the wider application of these materials in vascular tissue engineering.
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Affiliation(s)
- Chen-Hui Mi
- Key Laboratory of Resource Biology and Biotechnology in Western China, Ministry of Education, School of Medicine, Department of Life Sciences and Medicine, Northwest University, Xi'an, 710069, China
| | - Xin-Ya Qi
- Key Laboratory of Resource Biology and Biotechnology in Western China, Ministry of Education, School of Medicine, Department of Life Sciences and Medicine, Northwest University, Xi'an, 710069, China
| | - Yan-Wen Zhou
- Key Laboratory of Resource Biology and Biotechnology in Western China, Ministry of Education, School of Medicine, Department of Life Sciences and Medicine, Northwest University, Xi'an, 710069, China
| | - Yan-Wen Ding
- Key Laboratory of Resource Biology and Biotechnology in Western China, Ministry of Education, School of Medicine, Department of Life Sciences and Medicine, Northwest University, Xi'an, 710069, China
| | - Dai-Xu Wei
- Key Laboratory of Resource Biology and Biotechnology in Western China, Ministry of Education, School of Medicine, Department of Life Sciences and Medicine, Northwest University, Xi'an, 710069, China.
- School of Clinical Medicine, Chengdu University, Chengdu, China.
- Shaanxi Key Laboratory for Carbon-Neutral Technology, Xi'an, 710069, China.
| | - Yong Wang
- Department of Interventional Radiology and Vascular Surgery, Second Affiliated Hospital of Hainan Medical University, Haikou, China.
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24
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Santin A, Collura F, Singh G, Morlino MS, Bizzotto E, Bellan A, Gupte AP, Favaro L, Campanaro S, Treu L, Morosinotto T. Deciphering the genetic landscape of enhanced poly-3-hydroxybutyrate production in Synechocystis sp. B12. BIOTECHNOLOGY FOR BIOFUELS AND BIOPRODUCTS 2024; 17:101. [PMID: 39014484 PMCID: PMC11253406 DOI: 10.1186/s13068-024-02548-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/01/2024] [Accepted: 07/03/2024] [Indexed: 07/18/2024]
Abstract
BACKGROUND Microbial biopolymers such as poly-3-hydroxybutyrate (PHB) are emerging as promising alternatives for sustainable production of biodegradable bioplastics. Their promise is heightened by the potential utilisation of photosynthetic organisms, thus exploiting sunlight and carbon dioxide as source of energy and carbon, respectively. The cyanobacterium Synechocystis sp. B12 is an attractive candidate for its superior ability to accumulate high amounts of PHB as well as for its high-light tolerance, which makes it extremely suitable for large-scale cultivation. Beyond its practical applications, B12 serves as an intriguing model for unravelling the molecular mechanisms behind PHB accumulation. RESULTS Through a multifaceted approach, integrating physiological, genomic and transcriptomic analyses, this work identified genes involved in the upregulation of chlorophyll biosynthesis and phycobilisome degradation as the possible candidates providing Synechocystis sp. B12 an advantage in growth under high-light conditions. Gene expression differences in pentose phosphate pathway and acetyl-CoA metabolism were instead recognised as mainly responsible for the increased Synechocystis sp. B12 PHB production during nitrogen starvation. In both response to strong illumination and PHB accumulation, Synechocystis sp. B12 showed a metabolic modulation similar but more pronounced than the reference strain, yielding in better performances. CONCLUSIONS Our findings shed light on the molecular mechanisms of PHB biosynthesis, providing valuable insights for optimising the use of Synechocystis in economically viable and sustainable PHB production. In addition, this work supplies crucial knowledge about the metabolic processes involved in production and accumulation of these molecules, which can be seminal for the application to other microorganisms as well.
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Grants
- 691712 Horizon 2020 Framework Programme
- 691712 Horizon 2020 Framework Programme
- 691712 Horizon 2020 Framework Programme
- 691712 Horizon 2020 Framework Programme
- 691712 Horizon 2020 Framework Programme
- 691712 Horizon 2020 Framework Programme
- 691712 Horizon 2020 Framework Programme
- 691712 Horizon 2020 Framework Programme
- 327331 Ministero dell'Istruzione, dell'Università e della Ricerca
- 327331 Ministero dell'Istruzione, dell'Università e della Ricerca
- 327331 Ministero dell'Istruzione, dell'Università e della Ricerca
- 327331 Ministero dell'Istruzione, dell'Università e della Ricerca
- 327331 Ministero dell'Istruzione, dell'Università e della Ricerca
- 327331 Ministero dell'Istruzione, dell'Università e della Ricerca
- 327331 Ministero dell'Istruzione, dell'Università e della Ricerca
- 327331 Ministero dell'Istruzione, dell'Università e della Ricerca
- 327331 Ministero dell'Istruzione, dell'Università e della Ricerca
- Ministero dell’Istruzione, dell’Università e della Ricerca
- Università degli Studi di Padova
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Affiliation(s)
- Anna Santin
- Department of Biology, University of Padova, 35131, Padua, Italy.
| | - Flavio Collura
- Department of Biology, University of Padova, 35131, Padua, Italy
| | - Garima Singh
- Department of Biology, University of Padova, 35131, Padua, Italy
| | | | - Edoardo Bizzotto
- Department of Biology, University of Padova, 35131, Padua, Italy
| | | | - Ameya Pankaj Gupte
- Waste to Bioproducts Lab, Department of Agronomy Food Natural Resources Animals and Environment, University of Padova - Agripolis, 35020, Legnaro, PD, Italy
| | - Lorenzo Favaro
- Waste to Bioproducts Lab, Department of Agronomy Food Natural Resources Animals and Environment, University of Padova - Agripolis, 35020, Legnaro, PD, Italy
- Department of Microbiology, Stellenbosch University, Private Bag X1, Matieland, 7602, South Africa
| | | | - Laura Treu
- Department of Biology, University of Padova, 35131, Padua, Italy
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25
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Palenzuela M, Mula E, Blanco C, Sessini V, Shakaroun RM, Li H, Guillaume SM, Mosquera MEG. Copolymerization of β-Butyrolactones into Functionalized Polyhydroxyalkanoates Using Aluminum Catalysts: Influence of the Initiator in the Ring-Opening Polymerization Mechanism. Macromol Rapid Commun 2024; 45:e2400091. [PMID: 38690992 DOI: 10.1002/marc.202400091] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/13/2024] [Revised: 04/22/2024] [Indexed: 05/03/2024]
Abstract
Within bioplastics, natural poly(3-hydroxybutyrate) (PHB) stands out as fully biocompatible and biodegradable, even in marine environments; however, its high isotacticity and crystallinity limits its mechanical properties and hence its applications. PHB can also be synthesized with different tacticities via a catalytic ring-opening polymerization (ROP) of rac-β-butyrolactone (BBL), paving the way to PHB with better thermomechanical and processability properties. In this work, the catalyst family is extended based on aluminum phenoxy-imine methyl catalyst [AlMeL2], that reveals efficient in the ROP of BBL, to the halogeno analogous complex [AlClL2]. As well, the impact on the ROP mechanism of different initiators is further explored with a particular focus in dimethylaminopyridine (DMAP), a hardly studied initiator for the ROP of BBL. A thorough mechanistic study is performed that evidences the presence of two concomitant DMAP-mediated mechanisms, that lead to either a DMAP or a crotonate end-capping group. Besides, in order to increase the possibilities of PHB post-polymerization functionalization, the introduction of a side-chain functionality is explored, establishing the copolymerization of BBL with β-allyloxymethylene propiolactone (BPLOAll), resulting in well-defined P(BBL-co-BPLOAll) copolymers.
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Affiliation(s)
- Miguel Palenzuela
- Departamento de Química Orgánica y Química Inorgánica, Instituto de Investigación en Química "Andrés M. del Río" (IQAR), Universidad de Alcalá, Campus Universitario, Alcalá de Henares, Madrid, 28871, Spain
| | - Esther Mula
- Departamento de Química Orgánica y Química Inorgánica, Instituto de Investigación en Química "Andrés M. del Río" (IQAR), Universidad de Alcalá, Campus Universitario, Alcalá de Henares, Madrid, 28871, Spain
| | - Carlos Blanco
- Departamento de Química Orgánica y Química Inorgánica, Instituto de Investigación en Química "Andrés M. del Río" (IQAR), Universidad de Alcalá, Campus Universitario, Alcalá de Henares, Madrid, 28871, Spain
| | - Valentina Sessini
- Departamento de Química Orgánica y Química Inorgánica, Instituto de Investigación en Química "Andrés M. del Río" (IQAR), Universidad de Alcalá, Campus Universitario, Alcalá de Henares, Madrid, 28871, Spain
| | - Rama M Shakaroun
- Univ. Rennes, CNRS, Institut des Sciences Chimiques de Rennes, UMR 6226, Rennes, F-35042, France
| | - Hui Li
- Univ. Rennes, CNRS, Institut des Sciences Chimiques de Rennes, UMR 6226, Rennes, F-35042, France
| | - Sophie M Guillaume
- Univ. Rennes, CNRS, Institut des Sciences Chimiques de Rennes, UMR 6226, Rennes, F-35042, France
| | - Marta E G Mosquera
- Departamento de Química Orgánica y Química Inorgánica, Instituto de Investigación en Química "Andrés M. del Río" (IQAR), Universidad de Alcalá, Campus Universitario, Alcalá de Henares, Madrid, 28871, Spain
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26
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Zhang L, Ye JW, Li G, Park H, Luo H, Lin Y, Li S, Yang W, Guan Y, Wu F, Huang W, Wu Q, Scrutton NS, Nielsen J, Chen GQ. A long-term growth stable Halomonas sp. deleted with multiple transposases guided by its metabolic network model Halo-ecGEM. Metab Eng 2024; 84:95-108. [PMID: 38901556 DOI: 10.1016/j.ymben.2024.06.004] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/01/2024] [Revised: 05/02/2024] [Accepted: 06/06/2024] [Indexed: 06/22/2024]
Abstract
Microbial instability is a common problem during bio-production based on microbial hosts. Halomonas bluephagenesis has been developed as a chassis for next generation industrial biotechnology (NGIB) under open and unsterile conditions. However, the hidden genomic information and peculiar metabolism have significantly hampered its deep exploitation for cell-factory engineering. Based on the freshly completed genome sequence of H. bluephagenesis TD01, which reveals 1889 biological process-associated genes grouped into 84 GO-slim terms. An enzyme constrained genome-scale metabolic model Halo-ecGEM was constructed, which showed strong ability to simulate fed-batch fermentations. A visible salt-stress responsive landscape was achieved by combining GO-slim term enrichment and CVT-based omics profiling, demonstrating that cells deploy most of the protein resources by force to support the essential activity of translation and protein metabolism when exposed to salt stress. Under the guidance of Halo-ecGEM, eight transposases were deleted, leading to a significantly enhanced stability for its growth and bioproduction of various polyhydroxyalkanoates (PHA) including 3-hydroxybutyrate (3HB) homopolymer PHB, 3HB and 3-hydroxyvalerate (3HV) copolymer PHBV, as well as 3HB and 4-hydroxyvalerate (4HB) copolymer P34HB. This study sheds new light on the metabolic characteristics and stress-response landscape of H. bluephagenesis, achieving for the first time to construct a long-term growth stable chassis for industrial applications. For the first time, it was demonstrated that genome encoded transposons are the reason for microbial instability during growth in flasks and fermentors.
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Affiliation(s)
- Lizhan Zhang
- School of Life Sciences, Tsinghua University, Beijing, 100084, China
| | - Jian-Wen Ye
- School of Life Sciences, Tsinghua University, Beijing, 100084, China
| | - Gang Li
- Department of Biology and Biological Engineering, Chalmers University of Technology, SE412 96, Gothenburg, Sweden
| | - Helen Park
- School of Life Sciences, Tsinghua University, Beijing, 100084, China
| | - Hao Luo
- Department of Biology and Biological Engineering, Chalmers University of Technology, SE412 96, Gothenburg, Sweden
| | - Yina Lin
- School of Life Sciences, Tsinghua University, Beijing, 100084, China
| | - Shaowei Li
- School of Life Sciences, Tsinghua University, Beijing, 100084, China
| | - Weinan Yang
- School of Life Sciences, Tsinghua University, Beijing, 100084, China
| | - Yuying Guan
- School of Life Sciences, Tsinghua University, Beijing, 100084, China
| | - Fuqing Wu
- School of Life Sciences, Tsinghua University, Beijing, 100084, China; Tsinghua-Peking Center for Life Sciences, Tsinghua University, Beijing, 100084, China
| | - Wuzhe Huang
- PhaBuilder Biotechnol Co. Ltd., PhaBuilder Biotech Co. Ltd., Shunyi District, Zhaoquan Ying, Beijing, 101309, China
| | - Qiong Wu
- School of Life Sciences, Tsinghua University, Beijing, 100084, China; Center for Synthetic and Systems Biology, Tsinghua University, Beijing, 100084, China
| | - Nigel S Scrutton
- Future Biomanufacturing Research Hub, Manchester Institute of Biotechnology and Department of Chemistry, The University of Manchester, Manchester, M1 7DN, UK
| | - Jens Nielsen
- Department of Biology and Biological Engineering, Chalmers University of Technology, SE412 96, Gothenburg, Sweden; BioInnovation Institute, Ole Maaløes Vej 3, DK2200, Copenhagen N, Denmark.
| | - Guo-Qiang Chen
- School of Life Sciences, Tsinghua University, Beijing, 100084, China; Center for Synthetic and Systems Biology, Tsinghua University, Beijing, 100084, China; MOE Key Laboratory for Industrial Biocatalysts, Dept Chemical Engineering, Tsinghua University, Beijing, 100084, China; Tsinghua-Peking Center for Life Sciences, Tsinghua University, Beijing, 100084, China.
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27
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Xue M, Huang R, Liu W, Cheng J, Liu Y, Zhang J, Wang L, Liu D, Jiang H. Identification and characterization of a potential strain for the production of polyhydroxyalkanoate from glycerol. Front Microbiol 2024; 15:1413120. [PMID: 38966388 PMCID: PMC11223650 DOI: 10.3389/fmicb.2024.1413120] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/06/2024] [Accepted: 05/20/2024] [Indexed: 07/06/2024] Open
Abstract
While poly (3-hydroxybutyrate) (PHB) holds promise as a bioplastic, its commercial utilization has been hampered by the high cost of raw materials. However, glycerol emerges as a viable feedstock for PHB production, offering a sustainable production approach and substantial cost reduction potential. Glycerol stands out as a promising feedstock for PHB production, offering a pathway toward sustainable manufacturing and considerable cost savings. The identification and characterization of strains capable of converting glycerol into PHB represent a pivotal strategy in advancing PHB production research. In this study, we isolated a strain, Ralstonia sp. RRA (RRA). The strain exhibits remarkable proficiency in synthesizing PHB from glycerol. With glycerol as the carbon source, RRA achieved a specific growth rate of 0.19 h-1, attaining a PHB content of approximately 50% within 30 h. Through third-generation genome and transcriptome sequencing, we elucidated the genome composition and identified a total of eight genes (glpR, glpD, glpS, glpT, glpP, glpQ, glpV, and glpK) involved in the glycerol metabolism pathway. Leveraging these findings, the strain RRA demonstrates significant promise in producing PHB from low-cost renewable carbon sources.
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Affiliation(s)
- Mengheng Xue
- School of Life Science and Technology, Wuhan Polytechnic University, Wuhan, China
- Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin, China
- National Center of Technology Innovation for Synthetic Biology, Tianjin, China
| | - Rong Huang
- Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin, China
- National Center of Technology Innovation for Synthetic Biology, Tianjin, China
- College of Biotechnology, Tianjin University of Science and Technology, Tianjin, China
| | - Wei Liu
- School of Life Science and Technology, Wuhan Polytechnic University, Wuhan, China
- Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin, China
- National Center of Technology Innovation for Synthetic Biology, Tianjin, China
| | - Jian Cheng
- Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin, China
- National Center of Technology Innovation for Synthetic Biology, Tianjin, China
| | - Yuwan Liu
- Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin, China
- National Center of Technology Innovation for Synthetic Biology, Tianjin, China
| | - Jie Zhang
- Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin, China
- National Center of Technology Innovation for Synthetic Biology, Tianjin, China
- School of Life Sciences, Division of Life Sciences and Medicine, University of Science and Technology of China, Hefei, China
| | - Limei Wang
- School of Life Science and Technology, Wuhan Polytechnic University, Wuhan, China
| | - Dingyu Liu
- Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin, China
- National Center of Technology Innovation for Synthetic Biology, Tianjin, China
| | - Huifeng Jiang
- Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin, China
- National Center of Technology Innovation for Synthetic Biology, Tianjin, China
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28
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Koubaa M. Integrated Biorefinery for a Next-Generation Methanization Process Focusing on Volatile Fatty Acid Valorization: A Critical Review. Molecules 2024; 29:2477. [PMID: 38893350 PMCID: PMC11173433 DOI: 10.3390/molecules29112477] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/24/2024] [Revised: 05/16/2024] [Accepted: 05/22/2024] [Indexed: 06/21/2024] Open
Abstract
This review addresses the critical issue of a rapidly increasing worldwide waste stream and the need for sustainable management. The paper proposes an integrated transformation toward a next-generation methanization process, which leads not only to treating waste but also to converting it into higher value compounds and greener energy. Although the current and commonly used anaerobic digestion process is useful for biogas production, it presents limitations of resource exploitation and some negative environmental impacts. Focusing on the acidogenic stage in waste stream processing, the paper discusses the recent strategies to enhance the recovery of volatile fatty acids (VFAs). These acids serve as precursors for synthesizing a variety of biochemicals and biofuels, offering higher value products than solely energy recovery and soil fertilizers. Additionally, the importance of recycling the fermentation residues back into the biorefinery process is highlighted. This recycling not only generates additional VFAs but also contributes to generating clean energy, thereby enhancing the overall sustainability and efficiency of the waste management system. Moreover, the review discusses the necessity to integrate life cycle assessment (LCA) and techno-economic analysis (TEA) to evaluate the environmental impacts, sustainability, and processing costs of the proposed biorefinery.
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Affiliation(s)
- Mohamed Koubaa
- Université de Technologie de Compiègne, ESCOM, TIMR (Integrated Transformations of Renewable Matter), Centre de Recherche Royallieu-CS 60319, 60203 Compiègne Cedex, France
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29
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Yuan H, Takahashi K, Hayashi S, Suzuki M, Fujikake N, Kasuya KI, Zhou J, Nakagawa S, Yoshie N, Li C, Yamaguchi K, Nozaki K. Synthesis of Novel Polymers with Biodegradability by Main-Chain Editing of Chiral Polyketones. J Am Chem Soc 2024; 146:13658-13665. [PMID: 38710172 DOI: 10.1021/jacs.4c04389] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/08/2024]
Abstract
Although the use of biodegradable plastics is suitable for unrecoverable, single-use plastic, their high production cost and much lower variety compared to commodity plastics limit their application. In this study, we developed a new polymer with potential biodegradability, poly(ketone/ester), synthesized from propylene and carbon monoxide. Propylene and carbon monoxide are easily available at low costs from fossil resources, and they can also be derived from biomass. Using an atom insertion reaction to the main chain of the polymer, the main-chain editing of the polymer molecule proceeded with up to 89% selectivity for atom insertion over main-chain cleavage.
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Affiliation(s)
- Haobo Yuan
- Graduate School of Engineering, The University of Tokyo, Tokyo 113-8656, Japan
| | - Kohei Takahashi
- Graduate School of Engineering, The University of Tokyo, Tokyo 113-8656, Japan
| | - Shinya Hayashi
- Graduate School of Engineering, The University of Tokyo, Tokyo 113-8656, Japan
| | - Miwa Suzuki
- Gunma University Center for Food Science and Wellness, Maebashi, Gunma 371-8510, Japan
| | - Nobuhiro Fujikake
- Gunma University Center for Food Science and Wellness, Maebashi, Gunma 371-8510, Japan
| | - Ken-Ichi Kasuya
- Graduate School of Science and Technology, Gunma University, Kiryu, Gunma 376-8515, Japan
- Gunma University Center for Food Science and Wellness, Maebashi, Gunma 371-8510, Japan
| | - Jian Zhou
- Institute of Industrial Science, The University of Tokyo, Tokyo 153-8505, Japan
| | - Shintaro Nakagawa
- Institute of Industrial Science, The University of Tokyo, Tokyo 153-8505, Japan
| | - Naoko Yoshie
- Institute of Industrial Science, The University of Tokyo, Tokyo 153-8505, Japan
| | - Chifeng Li
- Graduate School of Engineering, The University of Tokyo, Tokyo 113-8656, Japan
| | - Kazuya Yamaguchi
- Graduate School of Engineering, The University of Tokyo, Tokyo 113-8656, Japan
| | - Kyoko Nozaki
- Graduate School of Engineering, The University of Tokyo, Tokyo 113-8656, Japan
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30
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Tyubaeva PM, Varyan IA, Gasparyan KG, Romanov RR, Yurina LV, Vasilyeva AD, Popov AA, Arzhakova OV. Life Cycle of Functional All-Green Biocompatible Fibrous Materials Based on Biodegradable Polyhydroxybutyrate and Hemin: Synthesis, Service Life, and the End-of-Life via Biodegradation. ACS APPLIED BIO MATERIALS 2024; 7:2325-2337. [PMID: 38483087 DOI: 10.1021/acsabm.4c00010] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/16/2024]
Abstract
This article addresses the entire life cycle of the all-green fibrous materials based on poly(3-hydroxybutyrate) (PHB) containing a natural biocompatible additive Hemin (Hmi): from preparation, service life, and the end of life upon in-soil biodegradation. Fibrous PHB/Hmi materials with a highly developed surface and interconnected porosity were prepared by electrospinning (ES) from Hmi-containing feed solutions. Structural organization of the PHB/Hmi materials (porosity, uniform structure, diameter of fibers, surface area, distribution of Hmi within the PHB matrix, phase composition, etc.) is shown to be governed by the ES conditions: the presence of even minor amounts of Hmi in the PHB/Hmi (below 5 wt %) serves as a powerful tool for the control over their structure, performance, and biodegradation. Service characteristics of the PHB/Hmi materials (wettability, prolonged release of Hmi, antibacterial activity, breathability, and mechanical properties) were studied by different physicochemical methods (scanning electron microscopy, Fourier transform infrared spectroscopy, energy-dispersive X-ray spectroscopy, differential scanning calorimetry, contact angle measurements, antibacterial tests, etc.). The effect of the structural organization of the PHB/Hmi materials on their in-soil biodegradation at the end of life was analyzed, and key factors providing efficient biodegradation of the PHB/Hmi materials at all stages (from adaptation to mineralization) are highlighted (high surface area and porosity, thin fibers, release of Hmi, etc.). The proposed approach allows for target-oriented preparation and structural design of the functional PHB/Hmi nonwovens when their structural supramolecular organization with a highly developed surface area controls both their service properties as efficient antibacterial materials and in-soil biodegradation upon the end of life.
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Affiliation(s)
- Polina M Tyubaeva
- Academic Department of Technology and Chemistry of Innovative Materials, Plekhanov University of Economics, Stremyanny per. 36, Moscow 117997 Russia
- Department of Biological and Chemical Physics of Polymers, Emanuel Institute of Biochemical Physics, Russian Academy of Sciences, Kosygina ul. 4, Moscow 119334, Russia
| | - Ivetta A Varyan
- Academic Department of Technology and Chemistry of Innovative Materials, Plekhanov University of Economics, Stremyanny per. 36, Moscow 117997 Russia
- Department of Biological and Chemical Physics of Polymers, Emanuel Institute of Biochemical Physics, Russian Academy of Sciences, Kosygina ul. 4, Moscow 119334, Russia
| | - Kristina G Gasparyan
- Department of Biological and Chemical Physics of Polymers, Emanuel Institute of Biochemical Physics, Russian Academy of Sciences, Kosygina ul. 4, Moscow 119334, Russia
| | - Roman R Romanov
- Academic Department of Technology and Chemistry of Innovative Materials, Plekhanov University of Economics, Stremyanny per. 36, Moscow 117997 Russia
| | - Lyubov V Yurina
- Department of Biological and Chemical Physics of Polymers, Emanuel Institute of Biochemical Physics, Russian Academy of Sciences, Kosygina ul. 4, Moscow 119334, Russia
| | - Alexandra D Vasilyeva
- Department of Biological and Chemical Physics of Polymers, Emanuel Institute of Biochemical Physics, Russian Academy of Sciences, Kosygina ul. 4, Moscow 119334, Russia
| | - Anatoly A Popov
- Academic Department of Technology and Chemistry of Innovative Materials, Plekhanov University of Economics, Stremyanny per. 36, Moscow 117997 Russia
- Department of Biological and Chemical Physics of Polymers, Emanuel Institute of Biochemical Physics, Russian Academy of Sciences, Kosygina ul. 4, Moscow 119334, Russia
| | - Olga V Arzhakova
- Faculty of Chemistry, Lomonosov Moscow State University, Leninskie Gory 1/3, 119991 Moscow, Russia
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31
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Shi C, Quinn EC, Diment WT, Chen EYX. Recyclable and (Bio)degradable Polyesters in a Circular Plastics Economy. Chem Rev 2024; 124:4393-4478. [PMID: 38518259 DOI: 10.1021/acs.chemrev.3c00848] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/24/2024]
Abstract
Polyesters carrying polar main-chain ester linkages exhibit distinct material properties for diverse applications and thus play an important role in today's plastics economy. It is anticipated that they will play an even greater role in tomorrow's circular plastics economy that focuses on sustainability, thanks to the abundant availability of their biosourced building blocks and the presence of the main-chain ester bonds that can be chemically or biologically cleaved on demand by multiple methods and thus bring about more desired end-of-life plastic waste management options. Because of this potential and promise, there have been intense research activities directed at addressing recycling, upcycling or biodegradation of existing legacy polyesters, designing their biorenewable alternatives, and redesigning future polyesters with intrinsic chemical recyclability and tailored performance that can rival today's commodity plastics that are either petroleum based and/or hard to recycle. This review captures these exciting recent developments and outlines future challenges and opportunities. Case studies on the legacy polyesters, poly(lactic acid), poly(3-hydroxyalkanoate)s, poly(ethylene terephthalate), poly(butylene succinate), and poly(butylene-adipate terephthalate), are presented, and emerging chemically recyclable polyesters are comprehensively reviewed.
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Affiliation(s)
- Changxia Shi
- Department of Chemistry, Colorado State University, Fort Collins, Colorado 80523, United States
| | - Ethan C Quinn
- Department of Chemistry, Colorado State University, Fort Collins, Colorado 80523, United States
| | - Wilfred T Diment
- Department of Chemistry, Colorado State University, Fort Collins, Colorado 80523, United States
| | - Eugene Y-X Chen
- Department of Chemistry, Colorado State University, Fort Collins, Colorado 80523, United States
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32
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Park S, Roh S, Yoo J, Ahn JH, Gong G, Lee SM, Um Y, Han SO, Ko JK. Tailored polyhydroxyalkanoate production from renewable non-fatty acid carbon sources using engineered Cupriavidus necator H16. Int J Biol Macromol 2024; 263:130360. [PMID: 38387639 DOI: 10.1016/j.ijbiomac.2024.130360] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/02/2024] [Revised: 02/14/2024] [Accepted: 02/19/2024] [Indexed: 02/24/2024]
Abstract
As thermoplastic, nontoxic, and biocompatible polyesters, polyhydroxyalkanoates (PHAs) are considered promising biodegradable plastic candidates for diverse applications. Short-chain-length/medium-chain-length (SCL/MCL) PHA copolymers are flexible and versatile PHAs that are typically produced from fatty acids, which are expensive and toxic. Therefore, to achieve the sustainable biosynthesis of SCL/MCL-PHAs from renewable non-fatty acid carbon sources (e.g., sugar or CO2), we used the lithoautotrophic bacterium Cupriavidus necator H16 as a microbial platform. Specifically, we synthesized tailored PHA copolymers with varying MCL-3-hydroxyalkanoate (3HA) compositions (10-70 mol%) from fructose by rewiring the MCL-3HA biosynthetic pathways, including (i) the thioesterase-mediated free fatty acid biosynthetic pathway coupled with the beta-oxidation cycle and (ii) the hydroxyacyl transferase-mediated fatty acid de novo biosynthetic pathway. In addition to sugar-based feedstocks, engineered strains are also promising platforms for the lithoautotrophic production of SCL/MCL-PHAs from CO2. The set of engineered C. necator strains developed in this study provides greater opportunities to produce customized polymers with controllable monomer compositions from renewable resources.
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Affiliation(s)
- Soyoung Park
- Clean Energy Research Center, Korea Institute of Science and Technology (KIST), Seoul 02792, Republic of Korea
| | - Soonjong Roh
- Biomaterials Research Center, Korea Institute of Science and Technology (KIST), Seoul 02792, Republic of Korea
| | - Jin Yoo
- Biomaterials Research Center, Korea Institute of Science and Technology (KIST), Seoul 02792, Republic of Korea
| | - Jung Ho Ahn
- Clean Energy Research Center, Korea Institute of Science and Technology (KIST), Seoul 02792, Republic of Korea; Division of Energy and Environment Technology, KIST School, University of Science and Technology, Seoul 02792, Republic of Korea
| | - Gyeongtaek Gong
- Clean Energy Research Center, Korea Institute of Science and Technology (KIST), Seoul 02792, Republic of Korea; Division of Energy and Environment Technology, KIST School, University of Science and Technology, Seoul 02792, Republic of Korea
| | - Sun-Mi Lee
- Clean Energy Research Center, Korea Institute of Science and Technology (KIST), Seoul 02792, Republic of Korea; Division of Energy and Environment Technology, KIST School, University of Science and Technology, Seoul 02792, Republic of Korea
| | - Youngsoon Um
- Clean Energy Research Center, Korea Institute of Science and Technology (KIST), Seoul 02792, Republic of Korea; Division of Energy and Environment Technology, KIST School, University of Science and Technology, Seoul 02792, Republic of Korea
| | - Sung Ok Han
- Department of Biotechnology, Graduate School, Korea University, Seoul 02841, Republic of Korea
| | - Ja Kyong Ko
- Clean Energy Research Center, Korea Institute of Science and Technology (KIST), Seoul 02792, Republic of Korea; Division of Energy and Environment Technology, KIST School, University of Science and Technology, Seoul 02792, Republic of Korea.
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33
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Park H, He H, Yan X, Liu X, Scrutton NS, Chen GQ. PHA is not just a bioplastic! Biotechnol Adv 2024; 71:108320. [PMID: 38272380 DOI: 10.1016/j.biotechadv.2024.108320] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/11/2023] [Revised: 01/21/2024] [Accepted: 01/22/2024] [Indexed: 01/27/2024]
Abstract
Polyhydroxyalkanoates (PHA) have evolved into versatile biopolymers, transcending their origins as mere bioplastics. This extensive review delves into the multifaceted landscape of PHA applications, shedding light on the diverse industries that have harnessed their potential. PHA has proven to be an invaluable eco-conscious option for packaging materials, finding use in films foams, paper coatings and even straws. In the textile industry, PHA offers a sustainable alternative, while its application as a carbon source for denitrification in wastewater treatment showcases its versatility in environmental remediation. In addition, PHA has made notable contributions to the medical and consumer sectors, with various roles ranging from 3D printing, tissue engineering implants, and cell growth matrices to drug delivery carriers, and cosmetic products. Through metabolic engineering efforts, PHA can be fine-tuned to align with the specific requirements of each industry, enabling the customization of material properties such as ductility, elasticity, thermal conductivity, and transparency. To unleash PHA's full potential, bridging the gap between research and commercial viability is paramount. Successful PHA production scale-up hinges on establishing direct supply chains to specific application domains, including packaging, food and beverage materials, medical devices, and agriculture. This review underscores that PHA's future rests on ongoing exploration across these industries and more, paving the way for PHA to supplant conventional plastics and foster a circular economy.
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Affiliation(s)
- Helen Park
- School of Life Sciences, Tsinghua University, Beijing 100084, China; EPSRC/BBSRC Future Biomanufacturing Research Hub, BBSRC Synthetic Biology Research Centre, SYNBIOCHEM, Manchester Institute of Biotechnology and Department of Chemistry, School of Natural Sciences, The University of Manchester, Manchester M1 7DN, UK
| | - Hongtao He
- School of Life Sciences, Tsinghua University, Beijing 100084, China
| | - Xu Yan
- School of Life Sciences, Tsinghua University, Beijing 100084, China
| | - Xu Liu
- PhaBuilder Biotech Co. Ltd., Shunyi District, Zhaoquan Ying, Beijing 101309, China
| | - Nigel S Scrutton
- EPSRC/BBSRC Future Biomanufacturing Research Hub, BBSRC Synthetic Biology Research Centre, SYNBIOCHEM, Manchester Institute of Biotechnology and Department of Chemistry, School of Natural Sciences, The University of Manchester, Manchester M1 7DN, UK
| | - Guo-Qiang Chen
- School of Life Sciences, Tsinghua University, Beijing 100084, China; Center for Synthetic and Systems Biology, Tsinghua University, Beijing 100084, China; Tsinghua-Peking Center for Life Sciences, Beijing, China; MOE Key Lab of Industrial Biocatalysis, Dept Chemical Engineering, Tsinghua University, Beijing 100084, China.
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34
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Liu Y, Song X, Yang W, Wang M, Lian G, Li ZJ. Production of polyhydroxyalkanoates by engineered Halomonas bluephagenesis using starch as a carbon source. Int J Biol Macromol 2024; 261:129838. [PMID: 38307428 DOI: 10.1016/j.ijbiomac.2024.129838] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/25/2023] [Revised: 01/17/2024] [Accepted: 01/27/2024] [Indexed: 02/04/2024]
Abstract
A novel α-amylase Amy03713 was screened and cloned from the starch utilization strain Vibrio alginolyticus LHF01. When heterologously expressed in Escherichia coli, Amy03713 exhibited the highest enzyme activity at 45 °C and pH 7, maintained >50 % of the enzyme activity in the range of 25-75 °C and pH 5-9, and sustained >80 % of the enzyme activity in 25 % (w/v) of NaCl solution, thus showing a wide range of adapted temperatures, pH, and salt concentrations. Halomonas bluephagenesis harboring amy03713 gene was able to directly utilize starch. With optimized amylase expression, H. bluephagenesis could produce poly(3-hydroxybutyrate) (PHB), poly(3-hydroxybutyrate-co-3-hydroxyvalerate) (PHBV), and poly(3-hydroxybutyrate-co-4-hydroxybutyrate) (P34HB). When cultured for PHB production, recombinant H. bluephagenesis was able to grow up to a cell dry weight of 11.26 g/L, achieving a PHB titer of 6.32 g/L, which is the highest titer that has been reported for PHB production from starch in shake flasks. This study suggests that Amy03713 is an ideal amylase for PHA production using starch as the carbon source in H. bluephagenesis.
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Affiliation(s)
- Yuzhong Liu
- Beijing Key Laboratory of Bioprocess, College of Life Science and Technology, Beijing University of Chemical Technology, Beijing 100029, People's Republic of China
| | - Xueqi Song
- Beijing Key Laboratory of Bioprocess, College of Life Science and Technology, Beijing University of Chemical Technology, Beijing 100029, People's Republic of China
| | - Weinan Yang
- Center for Synthetic and Systems Biology, School of Life Sciences, Tsinghua University, Beijing 100084, China
| | - Mengru Wang
- Beijing Key Laboratory of Bioprocess, College of Life Science and Technology, Beijing University of Chemical Technology, Beijing 100029, People's Republic of China
| | - Guoli Lian
- Beijing Key Laboratory of Bioprocess, College of Life Science and Technology, Beijing University of Chemical Technology, Beijing 100029, People's Republic of China
| | - Zheng-Jun Li
- Beijing Key Laboratory of Bioprocess, College of Life Science and Technology, Beijing University of Chemical Technology, Beijing 100029, People's Republic of China.
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de Souza F, Gupta RK. Bacteria for Bioplastics: Progress, Applications, and Challenges. ACS OMEGA 2024; 9:8666-8686. [PMID: 38434856 PMCID: PMC10905720 DOI: 10.1021/acsomega.3c07372] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/07/2023] [Revised: 01/17/2024] [Accepted: 01/24/2024] [Indexed: 03/05/2024]
Abstract
Bioplastics are one of the answers that can point society toward a sustainable future. Under this premise, the synthesis of polymers with competitive properties using low-cost starting materials is a highly desired factor in the industry. Also, tackling environmental issues such as nonbiodegradable waste generation, high carbon footprint, and consumption of nonrenewable resources are some of the current concerns worldwide. The scientific community has been placing efforts into the biosynthesis of polymers using bacteria and other microbes. These microorganisms can be convenient reactors to consume food and agricultural wastes and convert them into biopolymers with inherently attractive properties such as biodegradability, biocompatibility, and appreciable mechanical and chemical properties. Such biopolymers can be applied to several fields such as packing, cosmetics, pharmaceutical, medical, biomedical, and agricultural. Thus, intending to elucidate the science of microbes to produce polymers, this review starts with a brief introduction to bioplastics by describing their importance and the methods for their production. The second section dives into the importance of bacteria regarding the biochemical routes for the synthesis of polymers along with their advantages and disadvantages. The third section covers some of the main parameters that influence biopolymers' production. Some of the main applications of biopolymers along with a comparison between the polymers obtained from microorganisms and the petrochemical-based ones are presented. Finally, some discussion about the future aspects and main challenges in this field is provided to elucidate the main issues that should be tackled for the wide application of microorganisms for the preparation of bioplastics.
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Affiliation(s)
- Felipe
Martins de Souza
- National
Institute for Materials Advancement, Pittsburgh
State University, 1204 Research Road, Pittsburgh, Kansas 66762, United States
| | - Ram K. Gupta
- National
Institute for Materials Advancement, Pittsburgh
State University, 1204 Research Road, Pittsburgh, Kansas 66762, United States
- Department
of Chemistry, Pittsburgh State University, 1701 South Broadway Street, Pittsburgh, Kansas 66762, United States
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36
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Neoh SZ, Tan HT, Trakunjae C, Chek MF, Vaithanomsat P, Hakoshima T, Sudesh K. N-terminal truncation of PhaC BP-M-CPF4 and its effect on PHA production. Microb Cell Fact 2024; 23:52. [PMID: 38360657 PMCID: PMC10867992 DOI: 10.1186/s12934-024-02329-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/13/2023] [Accepted: 02/07/2024] [Indexed: 02/17/2024] Open
Abstract
BACKGROUND Among the polyhydroxyalkanoate (PHA), poly[(R)-3-hydroxybutyrate-co-(R)-3-hydroxyhexanoate] [P(3HB-co-3HHx)] is reported to closely resemble polypropylene and low-density polyethylene. Studies have shown that PHA synthase (PhaC) from mangrove soil (PhaCBP-M-CPF4) is an efficient PhaC for P(3HB-co-3HHx) production and N-termini of PhaCs influence its substrate specificity, dimerization, granule morphology, and molecular weights of PHA produced. This study aims to further improve PhaCBP-M-CPF4 through N-terminal truncation. RESULTS The N-terminal truncated mutants of PhaCBP-M-CPF4 were constructed based on the information of the predicted secondary and tertiary structures using PSIPRED server and AlphaFold2 program, respectively. The N-terminal truncated PhaCBP-M-CPF4 mutants were evaluated in C. necator mutant PHB-4 based on the cell dry weight, PHA content, 3HHx molar composition, molecular weights, and granule morphology of the PHA granules. The results showed that most transformants harbouring the N-terminal truncated PhaCBP-M-CPF4 showed a reduction in PHA content and cell dry weight except for PhaCBP-M-CPF4 G8. PhaCBP-M-CPF4 G8 and A27 showed an improved weight-average molecular weight (Mw) of PHA produced due to lower expression of the truncated PhaCBP-M-CPF4. Transformants harbouring PhaCBP-M-CPF4 G8, A27, and T74 showed a reduction in the number of granules. PhaCBP-M-CPF4 G8 produced higher Mw PHA in mostly single larger PHA granules with comparable production as the full-length PhaCBP-M-CPF4. CONCLUSION This research showed that N-terminal truncation had effects on PHA accumulation, substrate specificity, Mw, and granule morphology. This study also showed that N-terminal truncation of the amino acids that did not adopt any secondary structure can be an alternative to improve PhaCs for the production of PHA with higher Mw in mostly single larger granules.
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Affiliation(s)
- Soon Zher Neoh
- Ecobiomaterial Research Laboratory, School of Biological Sciences, Universiti Sains Malaysia, 11800 USM, Pulau Pinang, Penang, Malaysia
| | - Hua Tiang Tan
- Structural Biology Laboratory, Nara Institute of Science and Technology, 8916-5 Takayama, Ikoma, Nara, 630-0192, Japan
| | - Chanaporn Trakunjae
- Kasetsart Agricultural and Agro-Industrial Product Improvement Institute (KAPI), Kasetsart University, Bangkok, 10900, Thailand
| | - Min Fey Chek
- Structural Biology Laboratory, Nara Institute of Science and Technology, 8916-5 Takayama, Ikoma, Nara, 630-0192, Japan
| | - Pilanee Vaithanomsat
- Kasetsart Agricultural and Agro-Industrial Product Improvement Institute (KAPI), Kasetsart University, Bangkok, 10900, Thailand
| | - Toshio Hakoshima
- Structural Biology Laboratory, Nara Institute of Science and Technology, 8916-5 Takayama, Ikoma, Nara, 630-0192, Japan
| | - Kumar Sudesh
- Ecobiomaterial Research Laboratory, School of Biological Sciences, Universiti Sains Malaysia, 11800 USM, Pulau Pinang, Penang, Malaysia.
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Yao F, Yuan K, Zhou W, Tang W, Tang T, Yang X, Liu H, Li F, Xu Q, Peng C. Unlocking growth potential in Halomonas bluephagenesis for enhanced PHA production with sulfate ions. J Ind Microbiol Biotechnol 2024; 51:kuae013. [PMID: 38632039 PMCID: PMC11074995 DOI: 10.1093/jimb/kuae013] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/30/2024] [Accepted: 04/16/2024] [Indexed: 04/19/2024]
Abstract
The mutant strain Halomonas bluephagenesis (TDH4A1B5P) was found to produce PHA under low-salt, non-sterile conditions, but the yield was low. To improve the yield, different nitrogen sources were tested. It was discovered that urea was the most effective nitrogen source for promoting growth during the stable stage, while ammonium sulfate was used during the logarithmic stage. The growth time of H. bluephagenesis (TDH4A1B5P) and its PHA content were significantly prolonged by the presence of sulfate ions. After 64 hr in a 5-L bioreactor supplemented with sulfate ions, the dry cell weight (DCW) of H. bluephagenesis weighed 132 g/L and had a PHA content of 82%. To promote the growth and PHA accumulation of H. bluephagenesis (TDH4A1B5P), a feeding regimen supplemented with nitrogen sources and sulfate ions with ammonium sodium sulfate was established in this study. The DCW was 124 g/L, and the PHA content accounted for 82.3% (w/w) of the DCW, resulting in a PHA yield of 101 g/L in a 30-L bioreactor using the optimized culture strategy. In conclusion, stimulating H. bluephagenesis (TDH4A1B5P) to produce PHA is a feasible and suitable strategy for all H. bluephagenesis.
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Affiliation(s)
- Fuwei Yao
- School of food science and pharmaceutical engineering, Nanjing Normal University (NNU), Nanjing, 210023, China
- Biotechnology Center, COFCO Nutrition and Health Research Institute Co., Ltd., Beijing, 102209, China
| | - Kai Yuan
- Biotechnology Center, COFCO Nutrition and Health Research Institute Co., Ltd., Beijing, 102209, China
- COFCO Bio-Chemical Energy (Yushu) Co., Ltd., COFCO Biotechnology Co., Ltd., Changchun, 130400, China
| | - Weiqiang Zhou
- Biotechnology Center, COFCO Nutrition and Health Research Institute Co., Ltd., Beijing, 102209, China
- COFCO Bio-Chemical Energy (Yushu) Co., Ltd., COFCO Biotechnology Co., Ltd., Changchun, 130400, China
| | - Weitao Tang
- Biotechnology Center, COFCO Nutrition and Health Research Institute Co., Ltd., Beijing, 102209, China
- COFCO Bio-Chemical Energy (Yushu) Co., Ltd., COFCO Biotechnology Co., Ltd., Changchun, 130400, China
| | - Tang Tang
- Biotechnology Center, COFCO Nutrition and Health Research Institute Co., Ltd., Beijing, 102209, China
- COFCO Bio-Chemical Energy (Yushu) Co., Ltd., COFCO Biotechnology Co., Ltd., Changchun, 130400, China
| | - Xiaofan Yang
- Biotechnology Center, COFCO Nutrition and Health Research Institute Co., Ltd., Beijing, 102209, China
- COFCO Bio-Chemical Energy (Yushu) Co., Ltd., COFCO Biotechnology Co., Ltd., Changchun, 130400, China
| | - Haijun Liu
- Biotechnology Center, COFCO Nutrition and Health Research Institute Co., Ltd., Beijing, 102209, China
- COFCO Bio-Chemical Energy (Yushu) Co., Ltd., COFCO Biotechnology Co., Ltd., Changchun, 130400, China
| | - Fangliang Li
- Biotechnology Center, COFCO Nutrition and Health Research Institute Co., Ltd., Beijing, 102209, China
- COFCO Bio-Chemical Energy (Yushu) Co., Ltd., COFCO Biotechnology Co., Ltd., Changchun, 130400, China
| | - Qing Xu
- School of food science and pharmaceutical engineering, Nanjing Normal University (NNU), Nanjing, 210023, China
| | - Chao Peng
- Biotechnology Center, COFCO Nutrition and Health Research Institute Co., Ltd., Beijing, 102209, China
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38
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Liu Y, Wang Y, Lee CH, Kan CW, Lu X. Influence of Electrospinning Parameters on the Morphology of Electrospun Poly(3-hydroxybutyrate-co-3-hydroxyvalerate) Fibrous Membranes and Their Application as Potential Air Filtration Materials. Polymers (Basel) 2024; 16:154. [PMID: 38201819 PMCID: PMC10780722 DOI: 10.3390/polym16010154] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/26/2023] [Revised: 12/27/2023] [Accepted: 12/27/2023] [Indexed: 01/12/2024] Open
Abstract
A large number of non-degradable materials have severely damaged the ecological environment. Now, people are increasingly pursuing the use of environmentally friendly materials to replace traditional chemical materials. Polyhydroxyalkonates (PHAs) are receiving increasing attention because of the unique biodegradability and biocompatibility they offer. However, the applications of PHAs are still limited due to high production costs and insufficient study. This project examines the optimal electrospinning parameters for the production of PHA-based fibrous membranes for air filtration. A common biodegradable polyester, Poly(3-hydroxybutyrate-co-3-hydroxyvalerate) (PHBV), was electrospun into a nanofibrous membrane with a well-controlled surface microstructure. In order to produce smooth, bead-free fibers with micron-scale diameters, the effect of the process parameters (applied electric field, solution flow rate, inner diameter of hollow needle, and polymer concentration) on the electrospun fiber microstructure was optimized. The well-defined fibrous structure was optimized at an applied electric field of 20 kV, flow rate of 0.5 mL/h, solution concentration of 12 wt.%, and needle inner diameter of 0.21 mm. The morphology of the electrospun PHBV fibrous membrane was observed by scanning electron microscopy (SEM). Fourier transform infrared (FTIR) and Raman spectroscopy were used to explore the chemical signatures and phases of the electrospun PHBV nanofiber. The ball burst strength (BBS) was measured to assess the mechanical strength of the membrane. The small pore size of the nanofiber membranes ensured they had good application prospects in the field of air filtration. The particle filtration efficiency (PFE) of the optimized electrospun PHBV fibrous membrane was above 98% at standard atmospheric pressure.
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Affiliation(s)
- Yaohui Liu
- Faculty of Science and Technology, Technological and Higher Education Institute of Hong Kong, Tsing Yi, New Territories, Hong Kong, China; (Y.W.); (X.L.)
| | - Yanming Wang
- Faculty of Science and Technology, Technological and Higher Education Institute of Hong Kong, Tsing Yi, New Territories, Hong Kong, China; (Y.W.); (X.L.)
| | - Cheng-Hao Lee
- School of Fashion and Textiles, The Hong Kong Polytechnic University, Hung Hom, Kowloon, Hong Kong, China;
| | - Chi-Wai Kan
- School of Fashion and Textiles, The Hong Kong Polytechnic University, Hung Hom, Kowloon, Hong Kong, China;
| | - Xiaoying Lu
- Faculty of Science and Technology, Technological and Higher Education Institute of Hong Kong, Tsing Yi, New Territories, Hong Kong, China; (Y.W.); (X.L.)
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39
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Millan F, Hanik N. Degradation kinetics of medium chain length Polyhydroxyalkanoate degrading enzyme: a quartz crystal microbalance study. Front Bioeng Biotechnol 2023; 11:1303267. [PMID: 38162181 PMCID: PMC10756687 DOI: 10.3389/fbioe.2023.1303267] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/27/2023] [Accepted: 12/01/2023] [Indexed: 01/03/2024] Open
Abstract
This study investigates the enzymatic degradation processes of different classes of polyhydroxyalkanoates (PHAs), a group of biopolymers naturally synthesized by various microorganisms. Medium chain length PHAs (mcl-PHAs) are distinguished biopolymers due to their biodegradability and diverse material properties. Using quartz crystal microbalance measurements as a valuable tool for accurate real-time monitoring of the enzymatic degradation process, the research provides detailed kinetic data, describing the interaction between enzymes and substrates during the enzymatic degradation process. Thin films of poly-3-hydroxybutyrate (PHB) and polyhydroxyoctanoate copolymer (PHO), containing molar fractions of about 84% 3-hydroxyoctanoate and 16% 3-hydroxyhexanoate, were exposed to scl-depolymerases from Pseudomonas lemoignei LMG 2207 and recombinant mcl-depolymerase produced in Escherichia coli DH5α harboring the plasmid pMAD8, respectively. Analyses based on a heterogeneous kinetic model for the polymer degradation indicated a six-fold stronger adsorption equilibrium constant of mcl-depolymerase to PHO. Conversely, the degradation rate constant was approximately twice as high for scl-depolymerases acting on PHB. Finally, the study highlights the differences in enzyme-substrate interactions and degradation mechanisms between the investigated scl- and mcl-PHAs.
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Affiliation(s)
| | - Nils Hanik
- Institute of Life Technologies, School of Engineering, University of Applied Science and Arts Western Switzerland, Sion, Switzerland
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Kuang ZY, Yang H, Shen SW, Lin YN, Sun SW, Neureiter M, Yue HT, Ye JW. Bio-conversion of organic wastes towards polyhydroxyalkanoates. BIOTECHNOLOGY NOTES (AMSTERDAM, NETHERLANDS) 2023; 4:118-126. [PMID: 39416913 PMCID: PMC11446391 DOI: 10.1016/j.biotno.2023.11.006] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/17/2023] [Revised: 11/14/2023] [Accepted: 11/26/2023] [Indexed: 10/19/2024]
Abstract
The bio-manufacturing of products with substantial commercial value, particularly polyhydroxyalkanoates (PHA), using cost-effective carbon sources through microorganisms, has garnered heightened attention from both the scientific community and industry over the past few decades. Opting for industrial PHA production from various organic wastes, spanning industrial, agricultural, municipal, and food-based sources, emerges as a wiser choice. This strategy not only eases the burden of recycling organic waste and curbs environmental pollution but also trims down PHA production costs, rendering these materials more competitive in commercial markets. In addition, PHAs are a family of renewable, environmentally friendly, fully biodegradable and biocompatible polyesters with a multitude of applications. This review provides an overview of recent developments in PHA production from organic wastes. It covers the optimization of diverse metabolic pathways for producing various types of PHA from organic waste sources, pre-treatment and downstream processing for PHA using unrelated organic wastes, and challenges in industrial production of PHA using unrelated organic waste feedstocks and the challenges faced in industrial PHA production from organic wastes, along with potential solutions. Lastly, this study suggests underlying research endeavors aimed at further enhancing of the feasibility of industrial PHA production from organic wastes as an alternative to current petroleum-based plastics in the near future.
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Affiliation(s)
- Zhe-Yi Kuang
- School of Future Technology, Xinjiang University, Urumqi, 830017, PR China
| | - Hao Yang
- School of Biology and Biological Engineering, South China University of Technology, Guangzhou, 510006, PR China
| | - Shi-Wei Shen
- Laboratory of Synthetic Biology, School of Life Science and Technology, Xinjiang University, Urumqi, 830017, PR China
| | - Yi-Na Lin
- School of Biology and Biological Engineering, South China University of Technology, Guangzhou, 510006, PR China
| | - Shu-Wen Sun
- Laboratory of Synthetic Biology, School of Life Science and Technology, Xinjiang University, Urumqi, 830017, PR China
| | - Markus Neureiter
- Institute of Environmental Biotechnology, Department of Agrobiotechnology, University of Natural Resources and Life Sciences, Tulln, Austria
| | - Hai-Tao Yue
- School of Future Technology, Xinjiang University, Urumqi, 830017, PR China
- Laboratory of Synthetic Biology, School of Life Science and Technology, Xinjiang University, Urumqi, 830017, PR China
| | - Jian-Wen Ye
- School of Biology and Biological Engineering, South China University of Technology, Guangzhou, 510006, PR China
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41
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Zhang Z, Quinn EC, Olmedo-Martínez JL, Caputo MR, Franklin KA, Müller AJ, Chen EYX. Toughening Brittle Bio-P3HB with Synthetic P3HB of Engineered Stereomicrostructures. Angew Chem Int Ed Engl 2023; 62:e202311264. [PMID: 37878997 DOI: 10.1002/anie.202311264] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/04/2023] [Revised: 10/12/2023] [Accepted: 10/25/2023] [Indexed: 10/27/2023]
Abstract
Poly(3-hydroxybutyrate) (P3HB), a biologically produced, biodegradable natural polyester, exhibits excellent thermal and barrier properties but suffers from mechanical brittleness, largely limiting its applications. Here we report a mono-material product design strategy to toughen stereoperfect, brittle bio or synthetic P3HB by blending it with stereomicrostructurally engineered P3HB. Through tacticity ([mm] from 0 to 100 %) and molecular weight (Mn to 788 kDa) tuning, high-performance synthetic P3HB materials with tensile strength to ≈30 MPa, fracture strain to ≈800 %, and toughness to 126 MJ m-3 (>110× tougher than bio-P3HB) have been produced. Physical blending of the brittle P3HB with such P3HB in 10 to 90 wt % dramatically enhances its ductility from ≈5 % to 95-450 % and optical clarity from 19 % to 85 % visible light transmittance while maintaining desirably high elastic modulus (>1 GPa), tensile strength (>35 MPa), and melting temperature (160-170 °C). This P3HB-toughening-P3HB methodology departs from the traditional approach of incorporating chemically distinct components to toughen P3HB, which hinders chemical or mechanical recycling, highlighting the potential of the mono-material product design solely based on biodegradable P3HB to deliver P3HB materials with diverse performance properties.
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Affiliation(s)
- Zhen Zhang
- Department of Chemistry, Colorado State University, Fort Collins, CO 80523-1872, USA
| | - Ethan C Quinn
- Department of Chemistry, Colorado State University, Fort Collins, CO 80523-1872, USA
| | - Jorge L Olmedo-Martínez
- POLYMAT and Department of Polymers and Advanced Materials: Physics, Chemistry and Technology, Faculty of Chemistry, University of the Basque Country UPV/EHU, Paseo Manuel de Lardizábal 3, 20018, Donostia-San Sebastián, Spain
| | - Maria Rosaria Caputo
- POLYMAT and Department of Polymers and Advanced Materials: Physics, Chemistry and Technology, Faculty of Chemistry, University of the Basque Country UPV/EHU, Paseo Manuel de Lardizábal 3, 20018, Donostia-San Sebastián, Spain
| | - Kevin A Franklin
- Department of Chemistry, Colorado State University, Fort Collins, CO 80523-1872, USA
| | - Alejandro J Müller
- POLYMAT and Department of Polymers and Advanced Materials: Physics, Chemistry and Technology, Faculty of Chemistry, University of the Basque Country UPV/EHU, Paseo Manuel de Lardizábal 3, 20018, Donostia-San Sebastián, Spain
- IKERBASQUE, Basque Foundation for Science, Plaza Euskadi 5, 48009, Bilbao, Spain
| | - Eugene Y-X Chen
- Department of Chemistry, Colorado State University, Fort Collins, CO 80523-1872, USA
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Kang M, Lee DM, Hyun I, Rubab N, Kim SH, Kim SW. Advances in Bioresorbable Triboelectric Nanogenerators. Chem Rev 2023; 123:11559-11618. [PMID: 37756249 PMCID: PMC10571046 DOI: 10.1021/acs.chemrev.3c00301] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/05/2023] [Indexed: 09/29/2023]
Abstract
With the growing demand for next-generation health care, the integration of electronic components into implantable medical devices (IMDs) has become a vital factor in achieving sophisticated healthcare functionalities such as electrophysiological monitoring and electroceuticals worldwide. However, these devices confront technological challenges concerning a noninvasive power supply and biosafe device removal. Addressing these challenges is crucial to ensure continuous operation and patient comfort and minimize the physical and economic burden on the patient and the healthcare system. This Review highlights the promising capabilities of bioresorbable triboelectric nanogenerators (B-TENGs) as temporary self-clearing power sources and self-powered IMDs. First, we present an overview of and progress in bioresorbable triboelectric energy harvesting devices, focusing on their working principles, materials development, and biodegradation mechanisms. Next, we examine the current state of on-demand transient implants and their biomedical applications. Finally, we address the current challenges and future perspectives of B-TENGs, aimed at expanding their technological scope and developing innovative solutions. This Review discusses advancements in materials science, chemistry, and microfabrication that can advance the scope of energy solutions available for IMDs. These innovations can potentially change the current health paradigm, contribute to enhanced longevity, and reshape the healthcare landscape soon.
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Affiliation(s)
- Minki Kang
- School
of Advanced Materials Science and Engineering, Sungkyunkwan University, Suwon 16419, Republic
of Korea
| | - Dong-Min Lee
- School
of Advanced Materials Science and Engineering, Sungkyunkwan University, Suwon 16419, Republic
of Korea
| | - Inah Hyun
- Department
of Materials Science and Engineering, Center for Human-oriented Triboelectric
Energy Harvesting, Yonsei University, Seoul 03722, Republic of Korea
| | - Najaf Rubab
- Department
of Materials Science and Engineering, Gachon
University, Seongnam 13120, Republic
of Korea
| | - So-Hee Kim
- Department
of Materials Science and Engineering, Center for Human-oriented Triboelectric
Energy Harvesting, Yonsei University, Seoul 03722, Republic of Korea
| | - Sang-Woo Kim
- Department
of Materials Science and Engineering, Center for Human-oriented Triboelectric
Energy Harvesting, Yonsei University, Seoul 03722, Republic of Korea
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Gu P, Zhao S, Niu H, Li C, Jiang S, Zhou H, Li Q. Synthesis of isobutanol using acetate as sole carbon source in Escherichia coli. Microb Cell Fact 2023; 22:196. [PMID: 37759284 PMCID: PMC10537434 DOI: 10.1186/s12934-023-02197-w] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/26/2023] [Accepted: 09/06/2023] [Indexed: 09/29/2023] Open
Abstract
BACKGROUND With concerns about depletion of fossil fuel and environmental pollution, synthesis of biofuels such as isobutanol from low-cost substrate by microbial cell factories has attracted more and more attention. As one of the most promising carbon sources instead of food resources, acetate can be utilized by versatile microbes and converted into numerous valuable chemicals. RESULTS An isobutanol synthetic pathway using acetate as sole carbon source was constructed in E. coli. Pyruvate was designed to be generated via acetyl-CoA by pyruvate-ferredoxin oxidoreductase YdbK or anaplerotic pathway. Overexpression of transhydrogenase and NAD kinase increased the isobutanol titer of recombinant E. coli from 121.21 mg/L to 131.5 mg/L under batch cultivation. Further optimization of acetate supplement concentration achieved 157.05 mg/L isobutanol accumulation in WY002, representing the highest isobutanol titer by using acetate as sole carbon source. CONCLUSIONS The utilization of acetate as carbon source for microbial production of valuable chemicals such as isobutanol could reduce the consumption of food-based substrates and save production cost. Engineering strategies applied in this study will provide a useful reference for microbial production of pyruvate derived chemical compounds from acetate.
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Affiliation(s)
- Pengfei Gu
- School of Biological Science and Technology, University of Jinan, Jinan, 250022, People's Republic of China.
| | - Shuo Zhao
- School of Biological Science and Technology, University of Jinan, Jinan, 250022, People's Republic of China
| | - Hao Niu
- School of Biological Science and Technology, University of Jinan, Jinan, 250022, People's Republic of China
| | - Chengwei Li
- RZBC GROUP CO., LTD, Rizhao, 276800, Shandong, China
| | | | - Hao Zhou
- RZBC GROUP CO., LTD, Rizhao, 276800, Shandong, China
| | - Qiang Li
- School of Biological Science and Technology, University of Jinan, Jinan, 250022, People's Republic of China
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Ren ZW, Wang ZY, Ding YW, Dao JW, Li HR, Ma X, Yang XY, Zhou ZQ, Liu JX, Mi CH, Gao ZC, Pei H, Wei DX. Polyhydroxyalkanoates: the natural biopolyester for future medical innovations. Biomater Sci 2023; 11:6013-6034. [PMID: 37522312 DOI: 10.1039/d3bm01043k] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 08/01/2023]
Abstract
Polyhydroxyalkanoates (PHAs) are a family of natural microbial biopolyesters with the same basic chemical structure and diverse side chain groups. Based on their excellent biodegradability, biocompatibility, thermoplastic properties and diversity, PHAs are highly promising medical biomaterials and elements of medical devices for applications in tissue engineering and drug delivery. However, due to the high cost of biotechnological production, most PHAs have yet to be applied in the clinic and have only been studied at laboratory scale. This review focuses on the biosynthesis, diversity, physical properties, biodegradability and biosafety of PHAs. We also discuss optimization strategies for improved microbial production of commercial PHAs via novel synthetic biology tools. Moreover, we also systematically summarize various medical devices based on PHAs and related design approaches for medical applications, including tissue repair and drug delivery. The main degradation product of PHAs, 3-hydroxybutyrate (3HB), is recognized as a new functional molecule for cancer therapy and immune regulation. Although PHAs still account for only a small percentage of medical polymers, up-and-coming novel medical PHA devices will enter the clinical translation stage in the next few years.
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Affiliation(s)
- Zi-Wei Ren
- Key Laboratory of Resource Biology and Biotechnology in Western China, Ministry of Education, School of Medicine, Department of Life Sciences and Medicine, Northwest University, Xi'an, 710069, China.
| | - Ze-Yu Wang
- Key Laboratory of Resource Biology and Biotechnology in Western China, Ministry of Education, School of Medicine, Department of Life Sciences and Medicine, Northwest University, Xi'an, 710069, China.
| | - Yan-Wen Ding
- Key Laboratory of Resource Biology and Biotechnology in Western China, Ministry of Education, School of Medicine, Department of Life Sciences and Medicine, Northwest University, Xi'an, 710069, China.
| | - Jin-Wei Dao
- Key Laboratory of Resource Biology and Biotechnology in Western China, Ministry of Education, School of Medicine, Department of Life Sciences and Medicine, Northwest University, Xi'an, 710069, China.
- Dehong Biomedical Engineering Research Center, Dehong Teachers' College, Dehong, 678400, China
| | - Hao-Ru Li
- Key Laboratory of Resource Biology and Biotechnology in Western China, Ministry of Education, School of Medicine, Department of Life Sciences and Medicine, Northwest University, Xi'an, 710069, China.
| | - Xue Ma
- Key Laboratory of Resource Biology and Biotechnology in Western China, Ministry of Education, School of Medicine, Department of Life Sciences and Medicine, Northwest University, Xi'an, 710069, China.
| | - Xin-Yu Yang
- Key Laboratory of Resource Biology and Biotechnology in Western China, Ministry of Education, School of Medicine, Department of Life Sciences and Medicine, Northwest University, Xi'an, 710069, China.
| | - Zi-Qi Zhou
- Key Laboratory of Resource Biology and Biotechnology in Western China, Ministry of Education, School of Medicine, Department of Life Sciences and Medicine, Northwest University, Xi'an, 710069, China.
| | - Jia-Xuan Liu
- Key Laboratory of Resource Biology and Biotechnology in Western China, Ministry of Education, School of Medicine, Department of Life Sciences and Medicine, Northwest University, Xi'an, 710069, China.
| | - Chen-Hui Mi
- Key Laboratory of Resource Biology and Biotechnology in Western China, Ministry of Education, School of Medicine, Department of Life Sciences and Medicine, Northwest University, Xi'an, 710069, China.
| | - Zhe-Chen Gao
- Department of Orthopaedics, The Second Affiliated Hospital of Anhui Medical University, Hefei, 230601, China
| | - Hua Pei
- Department of Clinical Laboratory, The Second Affiliated Hospital, Hainan Medical University, Haikou, 570311, China.
| | - Dai-Xu Wei
- Key Laboratory of Resource Biology and Biotechnology in Western China, Ministry of Education, School of Medicine, Department of Life Sciences and Medicine, Northwest University, Xi'an, 710069, China.
- Department of Clinical Laboratory, The Second Affiliated Hospital, Hainan Medical University, Haikou, 570311, China.
- Shaanxi Key Laboratory for Carbon Neutral Technology, Xi'an, 710069, China
- Zigong Affiliated Hospital of Southwest Medical University, Zigong Psychiatric Research Center, Zigong Institute of Brain Science, Zigong, 643002, Sichuan, China
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Zhang L, Lin Y, Yi X, Huang W, Hu Q, Zhang Z, Wu F, Ye JW, Chen GQ. Engineering low-salt growth Halomonas Bluephagenesis for cost-effective bioproduction combined with adaptive evolution. Metab Eng 2023; 79:146-158. [PMID: 37543135 DOI: 10.1016/j.ymben.2023.08.001] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/26/2023] [Revised: 08/01/2023] [Accepted: 08/03/2023] [Indexed: 08/07/2023]
Abstract
Halophilic Halomonas bluephagenesis has been engineered to produce various added-value bio-compounds with reduced costs. However, the salt-stress regulatory mechanism remained unclear. H. bluephagenesis was randomly mutated to obtain low-salt growing mutants via atmospheric and room temperature plasma (ARTP). The resulted H. bluephagenesis TDH4A1B5 was constructed with the chromosomal integration of polyhydroxyalkanoates (PHA) synthesis operon phaCAB and deletion of phaP1 gene encoding PHA synthesis associated protein phasin, forming H. bluephagenesis TDH4A1B5P, which led to increased production of poly(3-hydroxybutyrate) (PHB) and poly(3-hydroxybutyrate-co-4-hydrobutyrate) (P34HB) by over 1.4-fold. H. bluephagenesis TDH4A1B5P also enhanced production of ectoine and threonine by 50% and 77%, respectively. A total 101 genes related to salinity tolerance was identified and verified via comparative genomic analysis among four ARTP mutated H. bluephagenesis strains. Recombinant H. bluephagenesis TDH4A1B5P was further engineered for PHA production utilizing sodium acetate or gluconate as sole carbon source. Over 33% cost reduction of PHA production could be achieved using recombinant H. bluephagenesis TDH4A1B5P. This study successfully developed a low-salt tolerant chassis H. bluephagenesis TDH4A1B5P and revealed salt-stress related genes of halophilic host strains.
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Affiliation(s)
- Lizhan Zhang
- School of Life Sciences, Tsinghua University, Beijing, 100084, China
| | - Yina Lin
- School of Life Sciences, Tsinghua University, Beijing, 100084, China
| | - Xueqing Yi
- School of Life Sciences, Tsinghua University, Beijing, 100084, China
| | - Wuzhe Huang
- PhaBuilder Biotech Co. Ltd., Shunyi District, Zhaoquan Ying, Beijing, 101309, China
| | - Qitiao Hu
- School of Life Sciences, Tsinghua University, Beijing, 100084, China
| | - Zhongnan Zhang
- School of Life Sciences, Tsinghua University, Beijing, 100084, China
| | - Fuqing Wu
- School of Life Sciences, Tsinghua University, Beijing, 100084, China
| | - Jian-Wen Ye
- School of Life Sciences, Tsinghua University, Beijing, 100084, China
| | - Guo-Qiang Chen
- School of Life Sciences, Tsinghua University, Beijing, 100084, China; Center for Synthetic and Systems Biology, Tsinghua University, Beijing, 100084, China; Tsinghua-Peking Center for Life Sciences, Beijing, China; MOE Key Lab of Industrial Biocatalysis, Dept Chemical Engineering, Tsinghua University, Beijing, 100084, China.
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Ming Y, Li G, Shi Z, Zhao X, Zhao Y, Gao G, Ma T, Wu M. Co-utilization of glucose and xylose for the production of poly-β-hydroxybutyrate (PHB) by Sphingomonas sanxanigenens NX02. Microb Cell Fact 2023; 22:162. [PMID: 37635215 PMCID: PMC10463938 DOI: 10.1186/s12934-023-02159-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/15/2023] [Accepted: 07/24/2023] [Indexed: 08/29/2023] Open
Abstract
BACKGROUND Poly-β-hydroxybutyrate (PHB), produced by a variety of microbial organisms, is a good substitute for petrochemically derived plastics due to its excellent properties such as biocompatibility and biodegradability. The high cost of PHB production is a huge barrier for application and popularization of such bioplastics. Thus, the reduction of the cost is of great interest. Using low-cost substrates for PHB production is an efficient and feasible means to reduce manufacturing costs, and the construction of microbial cell factories is also a potential way to reduce the cost. RESULTS In this study, an engineered Sphingomonas sanxanigenens strain to produce PHB by blocking the biosynthetic pathway of exopolysaccharide was constructed, and the resulting strain was named NXdE. NXdE could produce 9.24 ± 0.11 g/L PHB with a content of 84.0% cell dry weight (CDW) using glucose as a sole carbon source, which was significantly increased by 76.3% compared with the original strain NX02. Subsequently, the PHB yield of NXdE under the co-substrate with different proportions of glucose and xylose was also investigated, and results showed that the addition of xylose would reduce the PHB production. Hence, the Dahms pathway, which directly converted D-xylose into pyruvate in four sequential enzymatic steps, was enhanced by overexpressing the genes xylB, xylC, and kdpgA encoding xylose dehydrogenase, gluconolactonase, and aldolase in different combinations. The final strain NX02 (ΔssB, pBTxylBxylCkdpgA) (named NXdE II) could successfully co-utilize glucose and xylose from corn straw total hydrolysate (CSTH) to produce 21.49 ± 0.67 g/L PHB with a content of 91.2% CDW, representing a 4.10-fold increase compared to the original strain NX02. CONCLUSION The engineered strain NXdE II could co-utilize glucose and xylose from corn straw hydrolysate, and had a significant increase not only in cell growth but also in PHB yield and content. This work provided a new host strain and strategy for utilization of lignocellulosic biomass such as corn straw to produce intracellular products like PHB.
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Affiliation(s)
- Yue Ming
- Key Laboratory of Molecular Microbiology and Technology, College of Life Sciences, Ministry of Education, Nankai University, 300071, Tianjin, PR China
| | - Guoqiang Li
- Key Laboratory of Molecular Microbiology and Technology, College of Life Sciences, Ministry of Education, Nankai University, 300071, Tianjin, PR China
| | - Zhuangzhuang Shi
- Key Laboratory of Molecular Microbiology and Technology, College of Life Sciences, Ministry of Education, Nankai University, 300071, Tianjin, PR China
| | - Xin Zhao
- Key Laboratory of Molecular Microbiology and Technology, College of Life Sciences, Ministry of Education, Nankai University, 300071, Tianjin, PR China
| | - Yufei Zhao
- Key Laboratory of Molecular Microbiology and Technology, College of Life Sciences, Ministry of Education, Nankai University, 300071, Tianjin, PR China
| | - Ge Gao
- Key Laboratory of Molecular Microbiology and Technology, College of Life Sciences, Ministry of Education, Nankai University, 300071, Tianjin, PR China
| | - Ting Ma
- Key Laboratory of Molecular Microbiology and Technology, College of Life Sciences, Ministry of Education, Nankai University, 300071, Tianjin, PR China.
| | - Mengmeng Wu
- Key Laboratory of Molecular Microbiology and Technology, College of Life Sciences, Ministry of Education, Nankai University, 300071, Tianjin, PR China.
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Rzayeva A, Coffigniez F, Zeynalov N, Gontard N, Guillard V. Integrating the latest biological advances in the key steps of a food packaging life cycle. Front Nutr 2023; 10:1223638. [PMID: 37575333 PMCID: PMC10415040 DOI: 10.3389/fnut.2023.1223638] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/16/2023] [Accepted: 07/05/2023] [Indexed: 08/15/2023] Open
Abstract
This literature review provides a focus on the potential of integrating the latest scientific and technological advances in the biological field to improve the status of the key steps of a food packaging life cycle: production, usage, post-usage, and long-term fate. A case study of such multi-biological food packaging is demonstrated based on the use of PHAs (polyhydroxyalkanoates) polymer, a microbiologically produced polymer from non-food renewable resources, activated by the use of bioactive components to enhance its usage benefits by reducing food loss and waste, displaying potential for reusability, compostability as post-usage, and finally, being ultimately biodegradable in most common natural conditions to considerably reduce the negative impact that persistent plastics have on the environment. We discuss how designing safe and efficient multi "bio" food packaging implies finding a compromise between sometimes contradictory functional properties. For example, active antimicrobials help preserve food but can hamper the ultimate biodegradation rate of the polymer. This review presents such antagonisms as well as techniques (e.g., coatings, nanoencapsulation) and tools (e.g., release kinetic) that can help design optimized, safe, and efficient active food packaging.
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Affiliation(s)
- Aynura Rzayeva
- IATE, Agro Polymers Engineering & Emerging Technology, Univ Montpellier, INRAE, Institut Agro, Montpellier & CIRAD, Montpellier, France
- Nanostructured Metal-Polymer Catalysts, Institute of Catalysis and Inorganic Chemistry, Ministry of Science and Education Republic of Azerbaijan, Baku, Azerbaijan
| | - Fanny Coffigniez
- IATE, Agro Polymers Engineering & Emerging Technology, Univ Montpellier, INRAE, Institut Agro, Montpellier & CIRAD, Montpellier, France
| | - Nizami Zeynalov
- Nanostructured Metal-Polymer Catalysts, Institute of Catalysis and Inorganic Chemistry, Ministry of Science and Education Republic of Azerbaijan, Baku, Azerbaijan
| | - Nathalie Gontard
- IATE, Agro Polymers Engineering & Emerging Technology, Univ Montpellier, INRAE, Institut Agro, Montpellier & CIRAD, Montpellier, France
| | - Valérie Guillard
- IATE, Agro Polymers Engineering & Emerging Technology, Univ Montpellier, INRAE, Institut Agro, Montpellier & CIRAD, Montpellier, France
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Jiang N, Wang M, Song L, Yu D, Zhou S, Li Y, Li H, Han X. Polyhydroxybutyrate production by recombinant Escherichia coli based on genes related to synthesis pathway of PHB from Massilia sp. UMI-21. Microb Cell Fact 2023; 22:129. [PMID: 37452345 PMCID: PMC10347839 DOI: 10.1186/s12934-023-02142-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/01/2023] [Accepted: 07/05/2023] [Indexed: 07/18/2023] Open
Abstract
BACKGROUND Polyhydroxybutyrate (PHB) is currently the most common polymer produced by natural bacteria and alternative to conventional petrochemical-based plastics due to its similar material properties and biodegradability. Massilia sp. UMI-21, a newly found bacterium, could produce PHB from starch, maltotriose, or maltose, etc. and could serve as a candidate for seaweed-degrading bioplastic producers. However, the genes involved in PHB metabolism in Massilia sp. UMI-21 are still unclear. RESULTS In the present study, we assembled and annotated the genome of Massilia sp. UMI-21, identified genes related to the metabolism of PHB, and successfully constructed recombinant Escherichia coli harboring PHB-related genes (phaA2, phaB1 and phaC1) of Massilia sp. UMI-21, which showed up to 139.41% more product. Also, the vgb gene (encoding Vitreoscilla hemoglobin) was introduced into the genetically engineered E. coli and gained up to 117.42% more cell dry weight, 213.30% more PHB-like production and 44.09% more product content. Fermentation products extracted from recombinant E. coli harboring pETDuet1-phaA2phaB1-phaC1 and pETDuet1-phaA2phaB1-phaC1-vgb were identified as PHB by Fourier Transform Infrared and Proton nuclear magnetic resonance spectroscopy analysis. Furthermore, the decomposition temperature at 10% weight loss of PHB extracted from Massilia sp. UMI-21, recombinant E. coli DH5α-pETDuet1-phaA2phaB1-phaC1 and DH5α-pETDuet1-phaA2phaB1-phaC1-vgb was 276.5, 278.7 and 286.3 °C, respectively, showing good thermal stability. CONCLUSIONS Herein, we presented the whole genome information of PHB-producing Massilia sp. UMI-21 and constructed novel recombinant strains using key genes in PHB synthesis of strain UMI-21 and the vgb gene. This genetically engineered E. coli strain can serve as an effective novel candidate in E. coli cell factory for PHB production by the rapid cell growth and high PHB production.
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Affiliation(s)
- Nan Jiang
- Engineering Research Center of Chinese Ministry of Education for Edible and Medicinal Fungi, Jilin Agricultural University, Changchun, China
- Jilin Province Key Laboratory of Fungal Phenomics, Jilin Agricultural University, Changchun, China
| | - Ming Wang
- School of Life Science and Technology, Changchun University of Science and Technology, Changchun, China
| | - Linxin Song
- Engineering Research Center of Chinese Ministry of Education for Edible and Medicinal Fungi, Jilin Agricultural University, Changchun, China
- Jilin Province Key Laboratory of Fungal Phenomics, Jilin Agricultural University, Changchun, China
| | - Dengbin Yu
- Engineering Research Center of Chinese Ministry of Education for Edible and Medicinal Fungi, Jilin Agricultural University, Changchun, China
- Jilin Province Key Laboratory of Fungal Phenomics, Jilin Agricultural University, Changchun, China
| | - Shuangzi Zhou
- School of Life Science and Technology, Changchun University of Science and Technology, Changchun, China
| | - Yu Li
- Engineering Research Center of Chinese Ministry of Education for Edible and Medicinal Fungi, Jilin Agricultural University, Changchun, China
- Jilin Province Key Laboratory of Fungal Phenomics, Jilin Agricultural University, Changchun, China
- Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin, China
| | - Haiyan Li
- School of Life Science and Technology, Changchun University of Science and Technology, Changchun, China
| | - Xuerong Han
- Engineering Research Center of Chinese Ministry of Education for Edible and Medicinal Fungi, Jilin Agricultural University, Changchun, China.
- Jilin Province Key Laboratory of Fungal Phenomics, Jilin Agricultural University, Changchun, China.
- School of Life Science and Technology, Changchun University of Science and Technology, Changchun, China.
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49
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Drakonaki A, Mathioudaki E, Geladas ED, Konsolaki E, Vitsaxakis N, Chaniotakis N, Xie H, Tsiotis G. Production of Polyhydroxybutyrate by Genetically Modified Pseudomonas sp. phDV1: A Comparative Study of Utilizing Wine Industry Waste as a Carbon Source. Microorganisms 2023; 11:1592. [PMID: 37375094 DOI: 10.3390/microorganisms11061592] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/24/2023] [Revised: 06/09/2023] [Accepted: 06/13/2023] [Indexed: 06/29/2023] Open
Abstract
Pseudomonas sp. phDV1 is a polyhydroxyalkanoate (PHA) producer. The presence of the endogenous PHA depolymerase (phaZ) responsible for the degradation of the intracellular PHA is one of the main shortages in the bacterial production of PHA. Further, the production of PHA can be affected by the regulatory protein phaR, which is important in accumulating different PHA-associated proteins. PHA depolymerase phaZ and phaR knockout mutants of Pseudomonas sp. phDV1 were successfully constructed. We investigate the PHA production from 4.25 mM phenol and grape pomace of the mutants and the wild type. The production was screened by fluorescence microscopy, and the PHA production was quantified by HPLC chromatography. The PHA is composed of Polydroxybutyrate (PHB), as confirmed by 1H-nuclear magnetic resonance analysis. The wildtype strain produces approximately 280 μg PHB after 48 h in grape pomace, while the phaZ knockout mutant produces 310 μg PHB after 72 h in the presence of phenol per gram of cells, respectively. The ability of the phaZ mutant to synthesize high levels of PHB in the presence of monocyclic aromatic compounds may open the possibility of reducing the costs of industrial PHB production.
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Affiliation(s)
- Athina Drakonaki
- Department of Chemistry, University of Crete, GR-70013 Voutes, Greece
| | | | | | - Eleni Konsolaki
- Department of Chemistry, University of Crete, GR-70013 Voutes, Greece
| | | | - Nikos Chaniotakis
- Department of Chemistry, University of Crete, GR-70013 Voutes, Greece
| | - Hao Xie
- Max Planck Institute of Biophysics, Max-von-Laue-Straße 3, D-60438 Frankfurt am Main, Germany
| | - Georgios Tsiotis
- Department of Chemistry, University of Crete, GR-70013 Voutes, Greece
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50
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Trakunjae C, Boondaeng A, Apiwatanapiwat W, Janchai P, Neoh SZ, Sudesh K, Vaithanomsat P. Statistical optimization of P(3HB-co-3HHx) copolymers production by Cupriavidus necator PHB -4/pBBR_CnPro-phaC Rp and its properties characterization. Sci Rep 2023; 13:9005. [PMID: 37268758 DOI: 10.1038/s41598-023-36180-7] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/14/2023] [Accepted: 05/29/2023] [Indexed: 06/04/2023] Open
Abstract
Poly(3-hydroxybutyrate-co-3-hydroxyhexanoate) [P(3HB-co-3HHx)] is a bacterial copolymer in the polyhydroxyalkanoates (PHAs) family, a next-generation bioplastic. Our research team recently engineered a newly P(3HB-co-3HHx)-producing bacterial strain, Cupriavidus necator PHB-4/pBBR_CnPro-phaCRp. This strain can produce P(3HB-co-2 mol% 3HHx) using crude palm kernel oil (CPKO) as a sole carbon substrate. However, the improvement of P(3HB-co-3HHx) copolymer production by this strain has not been studied so far. Thus, this study aims to enhance the production of P(3HB-co-3HHx) copolymers containing higher 3HHx monomer compositions using response surface methodology (RSM). Three significant factors for P(3HB-co-3HHx) copolymers production, i.e., CPKO concentration, sodium hexanoate concentration, and cultivation time, were studied in the flask scale. As a result, a maximum of 3.6 ± 0.4 g/L of P(3HB-co-3HHx) with 4 mol% 3HHx compositions was obtained using the RSM optimized condition. Likewise, the higher 3HHx monomer composition (5 mol%) was obtained when scaling up the fermentation in a 10L-stirrer bioreactor. Furthermore, the produced polymer's properties were similar to marketable P(3HB-co-3HHx), making this polymer suitable for a wide range of applications.
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Affiliation(s)
- Chanaporn Trakunjae
- Kasetsart Agricultural and Agro-Industrial Product Improvement Institute (KAPI), Kasetsart University, Bangkok, 10900, Thailand
| | - Antika Boondaeng
- Kasetsart Agricultural and Agro-Industrial Product Improvement Institute (KAPI), Kasetsart University, Bangkok, 10900, Thailand
| | - Waraporn Apiwatanapiwat
- Kasetsart Agricultural and Agro-Industrial Product Improvement Institute (KAPI), Kasetsart University, Bangkok, 10900, Thailand
| | - Phornphimon Janchai
- Kasetsart Agricultural and Agro-Industrial Product Improvement Institute (KAPI), Kasetsart University, Bangkok, 10900, Thailand
| | - Soon Zher Neoh
- Ecobiomaterial Research Laboratory, School of Biological Sciences, Universiti Sains Malaysia USM, 11800, Penang, Malaysia
| | - Kumar Sudesh
- Ecobiomaterial Research Laboratory, School of Biological Sciences, Universiti Sains Malaysia USM, 11800, Penang, Malaysia
| | - Pilanee Vaithanomsat
- Kasetsart Agricultural and Agro-Industrial Product Improvement Institute (KAPI), Kasetsart University, Bangkok, 10900, Thailand.
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