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©2008 The WJG Press and Baishideng.
World J Gastroenterol. Apr 21, 2008; 14(15): 2383-2387
Published online Apr 21, 2008. doi: 10.3748/wjg.14.2383
Published online Apr 21, 2008. doi: 10.3748/wjg.14.2383
Table 1 Oligonucleotide primers used to amplify Atox1
Exon | Sequence | Fragment size |
Exon 1-Forward primer | 5’-GGAGTGGGAGGGGCCTCCGGGACC-3’ | 273 bp |
Exon 1-Reverse primer | 5’-GTAAGCTAGGGGACAACAGCGGCTC-3’ | 273 bp |
Exon 2 - Forward primer | 5’-GCACTGTGTGGGGGTCACTCTACAG-3’ | 320 bp |
Exon 2-Reverse primer | 5’-GTGAGGATTAAATGATGTGATTCAC-3’ | 320 bp |
Exon 3-Forward primer | 5’-GAACTCTTTCTTGCTGTAACTGGGAG-3’ | 344 bp |
Exon 3-Reverse primer | 5’-GAGGGCTCTCCCGCTCCACTCAAG-3’ | 344 bp |
Exon 4-Forward primer | 5’-TGCAATGTCGCTATGTCCACACCA-3’ | 326 bp |
Exon 4-Reverse primer | 5’-GATCACACAGCAAAGAATCAGAATC-3’ | 326 bp |
Table 2 Atox1 gene analysis in Wilson disease patients
Distribution of the variations detected in the Atox1-gene among the ATP7B-genotypes | ||||||
Mutations in the ATP7B-gene | No. of patients | 5’UTR -99 T>C | 5’UTR -68 C>T | No variation within the sequence | ||
Heterozygous | Homozygous | Heterozygous | Homozygous | |||
H1096Q/H1096Q | 22 | 6 | 4 | - | - | 12 |
R1041W/R1041W | 2 | - | 2 | |||
G12810N/G12810N | 1 | - | 1 | |||
G1266R/G1266R | 1 | 1 | - | |||
G710A/G710A | 1 | 1 | ||||
K844k-fs/K844k-fs | 1 | 1 | ||||
W779X/W779X | 1 | 1 | ||||
D765N/Y741X | 2 | 1 | 1 | |||
3400 Del C/2299InsC | 1 | 1 | ||||
3400 Del C/H1096Q | 1 | 1 | ||||
3400 Del C/G982V | 1 | 1 | ||||
3400 Del C/W779X | 1 | 1 | ||||
H1096Q/M769V | 1 | 1 | ||||
m.n.d./m.n.d. | 11 | 7 | 2 | 4 | ||
H1096Q/m.n.d. | 8 | 3 | 1 | 4 | ||
W 778 X/m.n.d. | 1 | 1 | ||||
W779X/m.n.d. | 2 | 1 | 1 | |||
D765N/m.n.d. | 2 | 2 | ||||
G710S/m.n.d. | 1 | 1 | ||||
M769V/m.n.d. | 1 | 1 | ||||
2299 InsC/m.n.d. | 1 | 1 | ||||
Total | 63 | 22 | 9 | 2 | 0 | 32 |
Table 3 Analysis of average ages of initial manifestation with regard to the variations detected in the Atox1 gene
Atox1-variation | Average age of initial manifestation | n of patiens | Standard deviation |
No variation within the sequence | 23.68 | 31 | 12.993 |
Variation within the sequence detected | 18.88 | 25 | 9.909 |
Total | 21.54 | 56 | 11.863 |
Table 4 Statistical data for Analysis of age of initial manifestation
Not standardized coefficients | Standardized coefficients | ||||
Model | B | Standard error | Beta | T | Significance |
ATP7B | 4.042 | 1.970 | 0.272 | 2.052 | 0.045 |
Atox1 | -5.312 | 3.079 | -0.225 | -1.725 | 0.091 |
- Citation: Simon I, Schaefer M, Reichert J, Stremmel W. Analysis of the human Atox 1 homologue in Wilson patients. World J Gastroenterol 2008; 14(15): 2383-2387
- URL: https://www.wjgnet.com/1007-9327/full/v14/i15/2383.htm
- DOI: https://dx.doi.org/10.3748/wjg.14.2383