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©2008 The WJG Press and Baishideng.
World J Gastroenterol. Mar 28, 2008; 14(12): 1925-1930
Published online Mar 28, 2008. doi: 10.3748/wjg.14.1925
Published online Mar 28, 2008. doi: 10.3748/wjg.14.1925
Table 1 Allele frequency of poly-T tract
Number (n) | Number (frequencies) of poly-T tract | |||
T5 | T6 | T7 | T9 | |
2n = 264 | 10 (0.0379) | 4 (0.0152) | 247 (0.9356) | 3 (0.0114) |
Table 2 Allele frequency of TG-repeat polymorphisms
Number (2n) | Number (frequencies) of TG-repeats | ||||
TG10 | TG11 | TG12 | TG13 | ||
264 | 3 (0.0114) | 151 (0.572) | 108 (0.4091) | 2 (0.0076) | |
TG-repeat number (frequencies) in individuals with alleles | |||||
11/11 | 11/12 | 12/12 | 11/13 | 10/12 | |
132 | 61 (0.4621) | 28 (0.2121) | 39 (0.2955) | 2 (0.0152) | 2 (0.0152) |
Table 3 Genotypes and allele frequencies at M470V polymorphic site
Number (2n) | Number (frequencies) of individuals with genotypes | Number (frequencies) of individuals with alleles | |||
MM | MV | VV | M | V | |
264 | 28 (0.2121) | 60 (0.4545) | 44 (0.3333) | 116 (0.4394) | 148 (0.5606) |
Table 4 Linkage of poly-T, TG-repeats and M470V
Linkage haplotypes | 2n (frequencies) (2n = 264) |
T7-TG11-V470 | 125 (0.4735) |
T7-TG12-M470 | 77 (0.2917) |
T7-TG11-M470 | 26 (0.0985) |
T7-TG12-V470 | 18 (0.0682) |
T5-TG12-M470 | 8 (0.0303) |
T5-TG12-V470 | 2 (0.0076) |
T7-TG13-M470 | 2 (0.0076) |
T9-TG10-M470 | 1 (0.0038) |
T9-TG10-V470 | 1 (0.0038) |
T6-TG12-M470 | 2 (0.0076) |
T6-TG12-V470 | 1 (0.0038) |
T6-TG11-V470 | 1 (0.0038) |
Table 5 Frequencies of TG-repeats and M470V haplotypes
M470V | (TG) n | n/frequencies (n = 132) |
V/V | 11/11 | 35 (0.2625) |
M/M | 12/12 | 27 (0.2045) |
M/V | 11/11 | 26 (0.1970) |
M/V | 11/12 | 20 (0.1515) |
M/V | 12/12 | 11 (0.0833) |
V/V | 11/12 | 8 (0.0606) |
M/V | 11/13 | 2 (0.0152) |
V/V | 12/12 | 1 (0.0076) |
M/M | 10/12 | 1 (0.0076) |
M/V | 10/12 | 1 (0.0076) |
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Citation: Huang Q, Ding W, Wei MX. Comparative analysis of common
CFTR polymorphisms poly-T, TG-repeats and M470V in a healthy Chinese population. World J Gastroenterol 2008; 14(12): 1925-1930 - URL: https://www.wjgnet.com/1007-9327/full/v14/i12/1925.htm
- DOI: https://dx.doi.org/10.3748/wjg.14.1925