Expression patterns and action analysis of genes associated with physiological responses during rat liver regeneration: Innate immune response

Table 1 Expression of 85 innate immune response-associated genes during rat liver regeneration

Gene Abbr.	Associatedto others	Folddifference	Gene Abbr.	Associatedto others	Folddifference	Gene Abbr.	Associatedto others	Folddifference	Gene Abbr.	Associatedto others	Folddifference
Innate immune cells			Colec12		3.9	Bdkrb2	3	0.4	Cxcl10		0.3, 9.2
Macrophage			Crp		0.5	1Il1b	1	0.4	Cxcl12		0.2
Adora2a		0.5	Hrh1	1	0.5, 9.9	Il1f5	1	0.4, 2.8	Darc		0.4, 8.5
Anxa1		4.3	Hrh4	1	7.5	Il1r1	1	0.5	Others
Cebpb		3.1	Mcpt6	1, 2	0.2	Il1rn	1	16.3	Parp4		0.5
Clec7a		0.2	Nr3c1		4.7	Il2		0.3, 3.5	Alox5		0.2, 2.5
Cybb		2.5	Spp1		0.5, 2.7	Il5		3.5	Alox5ap		4.9
Ereg	2	0.4	Nfatc4		0.5	Sarm1		0.2, 4.3	Apoe		0.1
Ltb4r		0.5, 8.7	Innate Immune effectors			Sele	3	12.9	Casp12		0.4,2.6
Mif		3.2	4 Complement system			b Interferon and related factors			Dmbt1		9.8
Pap		68.6	C1qa		0.3	Ifnk		0.1, 5.7	Hck		0.4
Pla2g4a		2	C1qr1	1, 2	5.5	Ddx58		11.8	Map2k3		0.4
Ptgs2		0.1, 2.1	C2		2.1	Irf3		2.6	Prkca		4.6
S100a8		6.5	1C3		0.2	Mx2		9.4	Ptafr		7.1
S100a9		4.9	C3ar1		0.3, 2.3	c Iumor necrosis factor and related factors			Reg3a		0.1, 64.1
Tgfb1	2, 3	4.0	C4a		0.5	Ager		0.4	Reg3g		0.3, 7.5
2 NK cell			C4bpa		2.0	Myd88		2.1
Ncr3		0.3	C5ar1		0.4, 2.6	Tnf	1	3.2
Ptger3		0.2	Cfh		2.5	d Chemotactic numerator and telated factors
Rela		0.5	Cfi		6.4	Ccl17		0.1
Ripk2		0.4	Cr2	3	6.0	Ccl19		3.9
Tlr2		10.6	Crry		2.4	Ccl2		128.0
Tlr4		0.5	Masp1		3.0	Ccl20		8.0
3 Other cells			Mbl2		0.2	Ccl24		4.0
Aoc3	1	6.1	Cell factors			1Ccl4		0.2, 3.0
Atrn	1	4.4	a Interlenkin and related factors			Ccl7		22.6
Clu	1, 2	3.0	Bcl3	1	0.4	Ccr1		0.4,.24.9

¹Reported genes associated with liver regeneration; associated to others: genes are involved in another kind of the responses besides one kind of innate immune responses; others: other genes associated with innate immune response, but cannot be clearly categorized.