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©2006 Baishideng Publishing Group Co.
World J Gastroenterol. Aug 7, 2006; 12(29): 4745-4749
Published online Aug 7, 2006. doi: 10.3748/wjg.v12.i29.4745
Published online Aug 7, 2006. doi: 10.3748/wjg.v12.i29.4745
Table 1 Primer sequence of MSI and annealing temperature
Locus | Primer sequence | Annealingtemperature (°C) |
BAT26 | TGACTACTTTTGACTTCAGCC | 53.9 |
AACCATTCAACATTTTTAACCC | ||
BAT25 | TCGCCTCCAAGAATGTAAGT | 53.4 |
TCTGCATTTTAACTATGGCTC | ||
D2S123 | AAACAGGATGCCTGCCTTTA | 57.4 |
GGACTTTCCACCTATGGGAC | ||
D5S346 | ACTCACTCTAGTGATAAATCGGG | 54.0 |
AGCAGATAAGACAGTATTACTAGTT | ||
D17S250 | GGAAGAATCAAATAGACAAT | 53.6 |
GCTGGCCATATATATATTTAAACC |
Table 2 Detection of MSI in three groups (%)
Group | n | MSI-H | MSI-L | MSS |
A | 20 | 85 (17/20) | 10 (2/20) | 5 (1/20) |
B | 20 | 40 (8/20) | 35 (7/20) | 25 (5/20) |
C | 20 | 10 (2/20) | 30 (6/20) | 60 (12/20) |
Table 3 Relationship among MSI-H, mean age of the patients and the sites of cancer (%)
Group | n | MSI-H | Mean age (yr) | Right hemicolon | Left hemicolon |
A | 20 | 17 (85) | 43.6 | 11 (64.7) | 6 (35.3) |
B | 20 | 8 (40) | 52.2 | 5 (62.5) | 3 (37.5) |
C | 20 | 2 (10) | 61.8 | 0 (0) | 2 (100) |
Table 4 Ratio of every locus occupying in the MSI-H (%)
Locus | Positive ratio of MSI-H | Positive ratio of MSI |
BAT26 | 94.1 (16/17) | 85 (17/20) |
BAT25 | 94.1 (16/17) | 90 (18/20) |
D2S123 | 64.7 (11/17) | 55 (11/20) |
D5S346 | 52.9 (9/17) | 50 (10/20) |
D17S250 | 35.3 (6/17) | 40 (8/20) |
- Citation: Liu WZ, Jin F, Zhang ZH, Wang SB. Role of detection of microsatellite instability in Chinese with hereditary nonpolyposis colorectal cancer or ordinary hereditary colorectal cancer. World J Gastroenterol 2006; 12(29): 4745-4749
- URL: https://www.wjgnet.com/1007-9327/full/v12/i29/4745.htm
- DOI: https://dx.doi.org/10.3748/wjg.v12.i29.4745