Copyright
©2005 Baishideng Publishing Group Inc.
World J Gastroenterol. May 14, 2005; 11(18): 2811-2816
Published online May 14, 2005. doi: 10.3748/wjg.v11.i18.2811
Published online May 14, 2005. doi: 10.3748/wjg.v11.i18.2811
Table 1 Differentially expressed known genes in HCC and normal liver.
| Clone ID | GB-ACC | Type | Code | Identity | Remarks |
| 192 | Z11793 | Known-related | Redox | Selenoprotein | Related to redox |
| 273 | AF132609 | Known-related | DR | Histone deacetylase 6 | Related to DNA replication and transcription |
| 568 | Y07846 | Known-related | TS | GAR-22 meningioma deleted gene, 22q12 | Deleted in meningioma |
| 671 | X80199 | Known-related | O | MLN51 | Possibly related to breast cancer progression (17q11-q21.3) |
| 1483 | U50330 | Known-related | P | PCP-2 | Procollagen C-proteinase |
| 2648 | AJ223951 | Known-related | CC | CDK2 | CDK2 |
| 2803 | E12644 | Known-related | CC | Q6 (quiescin) | Cell proliferation inhibitor |
| 2820 | U89867 | Known-related | ST | Nuclear matrix protein 55 (nmt55), | Possibly related to ER negative phenotype and |
| related to breast cancer metastasis | tumor progression metastases in breast cancer | ||||
| 2939 | M25915 | Known-related | P | Complement cytolysis inhibitor, CLI. | Complement cytolysis inhibitor |
| 3120 | X86691 | Known-related | TA | Helicase (presumed), Mi-2 protein (218 ku), involved in transcriptional activation | |
| 3373 | U60068 | Known-unrelated | M/S | Fibronectin | Matrix protein fibronectin |
| 3423 | AF027740 | Known-related | Redox | Transferase, microsomal glutathione S-transferase 1-like 1 (MGST1L1) | Related to redox |
| 4367 | AF064770 | Known-related | ST | Kinase, DAG (diacylglycerol) kinase alpha | Kinase for diacylglycerol |
| 6655 | AF069987 | Known-related | TS | Nitrilase 1 (NIT1) | A putative tumor suppressor, with diadenosine triphosphate (A-ppp-A) hydrolase activity |
| 7072 | X57352 | Known-related | I | Interferon-inducible gene family (1-8 U gene) | |
| 8343 | X13905 | Known-related | ST | Ras-related rab1B protein | |
| 9039 | U41767 | Known-related | P | Metargidin | A membrane-anchored metalloprotease-disintegrin protein with an RGD integrin binding sequence |
Table 2 Differentially expressed novel genes in HCC and normal liver.
| Clone ID | GB-ACC | Type | Identity |
| 6 | - | Novel | - |
| 50 | AC007078 | Novel-only DNA | Clone NH0340A14 |
| 432 | - | Novel | - |
| 775 | G42524 | Novel-only DNA | STS genomic (sequence tagged site) |
| 894 | - | Novel | - |
| 1008 | G27158 | Novel-only DNA | STS SHGC-31700 |
| 1485 | Z68162 | Novel-only DNA | Cosmid L145E5 |
| 1511 | AB002307 | Novel-unknown-function mRNA, | KIAA0309 |
| 1863 | AL110272 | Novel-unknown-function | DKFZp564C0716 |
| 2202 | AF086469 | Novel-unknown-function | Full-length insert cDNA clone ZD87A06 |
| 3227 | - | Novel | - |
| 3429 | AB020685 | Novel-unknown-function mRNA, | KIAA0878 |
| 4189 | - | Novel | - |
| 6068 | - | Novel | - |
| 7478 | AF052114 | Novel-only DNA | Clone 23887 |
| 7518 | - | Novel | - |
| 9427 | AB002339 | Novel-unknown-function mRNA, | KIAA0341 |
| 12723 | - | Novel | - |
| 13734 | AF030453 | Novel-only DNA | Chromosome 7q22, 7q22-q31.1 |
| 14214 | - | Novel | - |
| 14733 | - | Novel | - |
- Citation: Mao HJ, Li HN, Zhou XM, Zhao JL, Wan DF. Monitoring microarray-based gene expression profile changes in hepatocellular carcinoma. World J Gastroenterol 2005; 11(18): 2811-2816
- URL: https://www.wjgnet.com/1007-9327/full/v11/i18/2811.htm
- DOI: https://dx.doi.org/10.3748/wjg.v11.i18.2811