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For: Louie B, Mork P, Martin-Sanchez F, Halevy A, Tarczy-Hornoch P. Data integration and genomic medicine. J Biomed Inform. 2007;40:5-16. [PMID: 16574494 DOI: 10.1016/j.jbi.2006.02.007] [Citation(s) in RCA: 81] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/08/2005] [Accepted: 02/05/2006] [Indexed: 10/25/2022]
Number Cited by Other Article(s)
1
Akki AJ, Patil SA, Hungund S, Sahana R, Patil MM, Kulkarni RV, Raghava Reddy K, Zameer F, Raghu AV. Advances in Parkinson's disease research - A computational network pharmacological approach. Int Immunopharmacol 2024;139:112758. [PMID: 39067399 DOI: 10.1016/j.intimp.2024.112758] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/17/2024] [Revised: 07/22/2024] [Accepted: 07/22/2024] [Indexed: 07/30/2024]
2
Cheng C, Messerschmidt L, Bravo I, Waldbauer M, Bhavikatti R, Schenk C, Grujic V, Model T, Kubinec R, Barceló J. A General Primer for Data Harmonization. Sci Data 2024;11:152. [PMID: 38297013 PMCID: PMC10831085 DOI: 10.1038/s41597-024-02956-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/31/2023] [Accepted: 01/11/2024] [Indexed: 02/02/2024]  Open
3
Kalpana S, Lin WY, Wang YC, Fu Y, Wang HY. Alternate Antimicrobial Therapies and Their Companion Tests. Diagnostics (Basel) 2023;13:2490. [PMID: 37568853 PMCID: PMC10417861 DOI: 10.3390/diagnostics13152490] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/30/2023] [Accepted: 07/14/2023] [Indexed: 08/13/2023]  Open
4
Tran L, He K, Wang D, Jiang H. A cross-validation statistical framework for asymmetric data integration. Biometrics 2023;79:1280-1292. [PMID: 35524490 PMCID: PMC9637892 DOI: 10.1111/biom.13685] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/09/2021] [Accepted: 04/19/2022] [Indexed: 11/26/2022]
5
Asif M, Martiniano HFMC, Lamurias A, Kausar S, Couto FM. DGH-GO: dissecting the genetic heterogeneity of complex diseases using gene ontology. BMC Bioinformatics 2023;24:171. [PMID: 37101154 PMCID: PMC10134522 DOI: 10.1186/s12859-023-05290-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/03/2023] [Accepted: 04/14/2023] [Indexed: 04/28/2023]  Open
6
Husereau D, Steuten L, Muthu V, Thomas DM, Spinner DS, Ivany C, Mengel M, Sheffield B, Yip S, Jacobs P, Sullivan T. Effective and Efficient Delivery of Genome-Based Testing-What Conditions Are Necessary for Health System Readiness? Healthcare (Basel) 2022;10:healthcare10102086. [PMID: 36292532 PMCID: PMC9602865 DOI: 10.3390/healthcare10102086] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/22/2022] [Revised: 10/09/2022] [Accepted: 10/12/2022] [Indexed: 01/09/2023]  Open
7
Płuciennik A, Płaczek A, Wilk A, Student S, Oczko-Wojciechowska M, Fujarewicz K. Data Integration–Possibilities of Molecular and Clinical Data Fusion on the Example of Thyroid Cancer Diagnostics. Int J Mol Sci 2022;23:ijms231911880. [PMID: 36233181 PMCID: PMC9569592 DOI: 10.3390/ijms231911880] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/03/2022] [Revised: 09/24/2022] [Accepted: 09/28/2022] [Indexed: 11/23/2022]  Open
8
Dall'Alba G, Casa PL, Abreu FPD, Notari DL, de Avila E Silva S. A Survey of Biological Data in a Big Data Perspective. BIG DATA 2022;10:279-297. [PMID: 35394342 DOI: 10.1089/big.2020.0383] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/14/2023]
9
Youn J, Rai N, Tagkopoulos I. Knowledge integration and decision support for accelerated discovery of antibiotic resistance genes. Nat Commun 2022;13:2360. [PMID: 35487919 PMCID: PMC9055065 DOI: 10.1038/s41467-022-29993-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/14/2021] [Accepted: 03/04/2022] [Indexed: 11/09/2022]  Open
10
Das S, Mukhopadhyay I. TiMEG: an integrative statistical method for partially missing multi-omics data. Sci Rep 2021;11:24077. [PMID: 34911979 PMCID: PMC8674330 DOI: 10.1038/s41598-021-03034-z] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/01/2021] [Accepted: 11/24/2021] [Indexed: 11/25/2022]  Open
11
Kovanda A, Zimani AN, Peterlin B. How to design a national genomic project-a systematic review of active projects. Hum Genomics 2021;15:20. [PMID: 33761998 PMCID: PMC7988644 DOI: 10.1186/s40246-021-00315-6] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/15/2020] [Accepted: 02/23/2021] [Indexed: 01/18/2023]  Open
12
Irshad O, Ghani Khan MU. Formalization and Semantic Integration of Heterogeneous Omics Annotations for Exploratory Searches. Curr Bioinform 2021. [DOI: 10.2174/1574893615666200127122818] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
13
Samra H, Li A, Soh B. GENE2D: A NoSQL Integrated Data Repository of Genetic Disorders Data. Healthcare (Basel) 2020;8:healthcare8030257. [PMID: 32781728 PMCID: PMC7551627 DOI: 10.3390/healthcare8030257] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/04/2020] [Revised: 07/27/2020] [Accepted: 08/04/2020] [Indexed: 11/16/2022]  Open
14
Irshad O, Khan MUG. Integration and Querying of Heterogeneous Omics Semantic Annotations for Biomedical and Biomolecular Knowledge Discovery. Curr Bioinform 2020. [DOI: 10.2174/1574893614666190409112025] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
15
Mihaylov I, Kańduła M, Krachunov M, Vassilev D. A novel framework for horizontal and vertical data integration in cancer studies with application to survival time prediction models. Biol Direct 2019;14:22. [PMID: 31752974 PMCID: PMC6868770 DOI: 10.1186/s13062-019-0249-6] [Citation(s) in RCA: 31] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/23/2018] [Accepted: 09/20/2019] [Indexed: 12/17/2022]  Open
16
Emam I, Elyasigomari V, Matthews A, Pavlidis S, Rocca-Serra P, Guitton F, Verbeeck D, Grainger L, Borgogni E, Del Giudice G, Saqi M, Houston P, Guo Y. PlatformTM, a standards-based data custodianship platform for translational medicine research. Sci Data 2019;6:149. [PMID: 31409798 PMCID: PMC6692384 DOI: 10.1038/s41597-019-0156-9] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/23/2018] [Accepted: 07/25/2019] [Indexed: 12/20/2022]  Open
17
Ethier J, McGilchrist M, Barton A, Cloutier A, Curcin V, Delaney BC, Burgun A. The TRANSFoRm project: Experience and lessons learned regarding functional and interoperability requirements to support primary care. Learn Health Syst 2018;2:e10037. [PMID: 31245579 PMCID: PMC6508823 DOI: 10.1002/lrh2.10037] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/08/2016] [Revised: 07/05/2017] [Accepted: 07/12/2017] [Indexed: 01/02/2023]  Open
18
Chen X, Gururaj AE, Ozyurt B, Liu R, Soysal E, Cohen T, Tiryaki F, Li Y, Zong N, Jiang M, Rogith D, Salimi M, Kim HE, Rocca-Serra P, Gonzalez-Beltran A, Farcas C, Johnson T, Margolis R, Alter G, Sansone SA, Fore IM, Ohno-Machado L, Grethe JS, Xu H. DataMed - an open source discovery index for finding biomedical datasets. J Am Med Inform Assoc 2018;25:300-308. [PMID: 29346583 PMCID: PMC7378878 DOI: 10.1093/jamia/ocx121] [Citation(s) in RCA: 37] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/30/2017] [Revised: 09/20/2017] [Accepted: 09/28/2017] [Indexed: 12/17/2022]  Open
19
Al Kawam A, Sen A, Datta A, Dickey N. Understanding the Bioinformatics Challenges of Integrating Genomics into Healthcare. IEEE J Biomed Health Inform 2017;22:1672-1683. [PMID: 29990071 DOI: 10.1109/jbhi.2017.2778263] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
20
Conceptual Modeling for Genomics: Building an Integrated Repository of Open Data. CONCEPTUAL MODELING 2017. [DOI: 10.1007/978-3-319-69904-2_26] [Citation(s) in RCA: 25] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
21
Savonnet M, Leclercq E, Naubourg P. eClims: An Extensible and Dynamic Integration Framework for Biomedical Information Systems. IEEE J Biomed Health Inform 2016;20:1640-1649. [DOI: 10.1109/jbhi.2015.2464353] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
22
Warner JL, Jain SK, Levy MA. Integrating cancer genomic data into electronic health records. Genome Med 2016;8:113. [PMID: 27784327 PMCID: PMC5081968 DOI: 10.1186/s13073-016-0371-3] [Citation(s) in RCA: 47] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]  Open
23
Liu Y, Chiaromonte F, Li B. Structured Ordinary Least Squares: A Sufficient Dimension Reduction approach for regressions with partitioned predictors and heterogeneous units. Biometrics 2016;73:529-539. [PMID: 27649087 DOI: 10.1111/biom.12579] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/01/2015] [Revised: 07/01/2016] [Accepted: 07/01/2016] [Indexed: 11/29/2022]
24
Myneni S, Patel VL, Bova GS, Wang J, Ackerman CF, Berlinicke CA, Chen SH, Lindvall M, Zack DJ. Resolving complex research data management issues in biomedical laboratories: Qualitative study of an industry-academia collaboration. COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE 2016;126:160-70. [PMID: 26652980 PMCID: PMC4778387 DOI: 10.1016/j.cmpb.2015.11.001] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/26/2015] [Revised: 10/21/2015] [Accepted: 11/03/2015] [Indexed: 06/05/2023]
25
Masseroli M, Canakoglu A, Ceri S. Integration and Querying of Genomic and Proteomic Semantic Annotations for Biomedical Knowledge Extraction. IEEE/ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS 2016;13:209-219. [PMID: 27045824 DOI: 10.1109/tcbb.2015.2453944] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/05/2023]
26
Herr TM, Bielinski SJ, Bottinger E, Brautbar A, Brilliant M, Chute CG, Cobb BL, Denny JC, Hakonarson H, Hartzler AL, Hripcsak G, Kannry J, Kohane IS, Kullo IJ, Lin S, Manzi S, Marsolo K, Overby CL, Pathak J, Peissig P, Pulley J, Ralston J, Rasmussen L, Roden DM, Tromp G, Uphoff T, Weng C, Wolf W, Williams MS, Starren J. Practical considerations in genomic decision support: The eMERGE experience. J Pathol Inform 2015;6:50. [PMID: 26605115 PMCID: PMC4629307 DOI: 10.4103/2153-3539.165999] [Citation(s) in RCA: 42] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/31/2015] [Accepted: 07/23/2015] [Indexed: 11/04/2022]  Open
27
Orechia J, Pathak A, Shi Y, Nawani A, Belozerov A, Fontes C, Lakhiani C, Jawale C, Patel C, Quinn D, Botvinnik D, Mei E, Cotter E, Byleckie J, Ullman-Cullere M, Chhetri P, Chalasani P, Karnam P, Beaudoin R, Sahu S, Belozerova Y, Mathew JP. OncDRS: An integrative clinical and genomic data platform for enabling translational research and precision medicine. Appl Transl Genom 2015;6:18-25. [PMID: 27054074 PMCID: PMC4803771 DOI: 10.1016/j.atg.2015.08.005] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/29/2015] [Accepted: 08/05/2015] [Indexed: 02/01/2023]
28
Roman S, Panduro A. Genomic medicine in gastroenterology: A new approach or a new specialty? World J Gastroenterol 2015;21:8227-8237. [PMID: 26217074 PMCID: PMC4507092 DOI: 10.3748/wjg.v21.i27.8227] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 01/27/2015] [Revised: 03/24/2015] [Accepted: 05/04/2015] [Indexed: 02/06/2023]  Open
29
Livingston KM, Bada M, Baumgartner WA, Hunter LE. KaBOB: ontology-based semantic integration of biomedical databases. BMC Bioinformatics 2015;16:126. [PMID: 25903923 PMCID: PMC4448321 DOI: 10.1186/s12859-015-0559-3] [Citation(s) in RCA: 34] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/23/2014] [Accepted: 03/30/2015] [Indexed: 04/04/2023]  Open
30
Ashish N, Toga AW. Medical data transformation using rewriting. Front Neuroinform 2015;9:1. [PMID: 25750622 PMCID: PMC4335467 DOI: 10.3389/fninf.2015.00001] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/26/2014] [Accepted: 01/29/2015] [Indexed: 11/13/2022]  Open
31
Machado CM, Rebholz-Schuhmann D, Freitas AT, Couto FM. The semantic web in translational medicine: current applications and future directions. Brief Bioinform 2015;16:89-103. [PMID: 24197933 PMCID: PMC4293377 DOI: 10.1093/bib/bbt079] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/22/2013] [Accepted: 10/08/2013] [Indexed: 11/14/2022]  Open
32
Wade TD, Zelarney PT, Hum RC, McGee S, Batson DH. Using patient lists to add value to integrated data repositories. J Biomed Inform 2014;52:72-7. [PMID: 24534444 DOI: 10.1016/j.jbi.2014.02.010] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/17/2013] [Revised: 12/20/2013] [Accepted: 02/04/2014] [Indexed: 01/16/2023]
33
Alawieh A, Sabra Z, Nokkari A, El-Assaad A, Mondello S, Zaraket F, Fadlallah B, Kobeissy FH. Bioinformatics approach to understanding interacting pathways in neuropsychiatric disorders. Methods Mol Biol 2014;1168:157-172. [PMID: 24870135 DOI: 10.1007/978-1-4939-0847-9_9] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/03/2023]
34
Keator DB, Helmer K, Steffener J, Turner JA, Van Erp TGM, Gadde S, Ashish N, Burns GA, Nichols BN. Towards structured sharing of raw and derived neuroimaging data across existing resources. Neuroimage 2013;82:647-61. [PMID: 23727024 PMCID: PMC4028152 DOI: 10.1016/j.neuroimage.2013.05.094] [Citation(s) in RCA: 55] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/01/2012] [Revised: 05/11/2013] [Accepted: 05/18/2013] [Indexed: 10/26/2022]  Open
35
Lengauer T. Stellenwert der Bioinformatik für die personalisierte Medizin. Bundesgesundheitsblatt Gesundheitsforschung Gesundheitsschutz 2013;56:1489-94. [DOI: 10.1007/s00103-013-1819-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
36
Devine EB, Capurro D, van Eaton E, Alfonso-Cristancho R, Devlin A, Yanez ND, Yetisgen-Yildiz M, Flum DR, Tarczy-Hornoch P. Preparing Electronic Clinical Data for Quality Improvement and Comparative Effectiveness Research: The SCOAP CERTAIN Automation and Validation Project. EGEMS 2013;1:1025. [PMID: 25848565 PMCID: PMC4371452 DOI: 10.13063/2327-9214.1025] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
37
Using Commercially Available Tools for Multifaceted Health Assessment. Comput Inform Nurs 2013;31:329-34. [DOI: 10.1097/nxn.0b013e318295e58f] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
38
Shoenbill K, Fost N, Tachinardi U, Mendonca EA. Genetic data and electronic health records: a discussion of ethical, logistical and technological considerations. J Am Med Inform Assoc 2013;21:171-80. [PMID: 23771953 PMCID: PMC3912723 DOI: 10.1136/amiajnl-2013-001694] [Citation(s) in RCA: 49] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/11/2023]  Open
39
Harrow I, Filsell W, Woollard P, Dix I, Braxenthaler M, Gedye R, Hoole D, Kidd R, Wilson J, Rebholz-Schuhmann D. Towards Virtual Knowledge Broker services for semantic integration of life science literature and data sources. Drug Discov Today 2013;18:428-34. [DOI: 10.1016/j.drudis.2012.11.012] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/18/2012] [Revised: 11/09/2012] [Accepted: 11/22/2012] [Indexed: 10/27/2022]
40
Lonergan DF, Ehrenfeld JM. Advancement of information technology in outpatient and perioperative settings to support patient care and translational research. Pain Manag 2012;2:445-9. [DOI: 10.2217/pmt.12.43] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]  Open
41
Kounelakis MG, Zervakis ME, Giakos GC, Postma GJ, Buydens LMC, Kotsiakis X. On the relevance of glycolysis process on brain gliomas. IEEE J Biomed Health Inform 2012;17:128-35. [PMID: 22614725 DOI: 10.1109/titb.2012.2199128] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
42
Palma JP, Benitz WE, Tarczy-Hornoch P, Butte AJ, Longhurst CA. Neonatal Informatics: Transforming Neonatal Care Through Translational Bioinformatics. Neoreviews 2012;13:e281-e284. [PMID: 22924023 DOI: 10.1542/neo.13-5-e281] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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Bauer-Mehren A, van Mullingen EM, Avillach P, Carrascosa MDC, Garcia-Serna R, Piñero J, Singh B, Lopes P, Oliveira JL, Diallo G, Ahlberg Helgee E, Boyer S, Mestres J, Sanz F, Kors JA, Furlong LI. Automatic filtering and substantiation of drug safety signals. PLoS Comput Biol 2012;8:e1002457. [PMID: 22496632 PMCID: PMC3320573 DOI: 10.1371/journal.pcbi.1002457] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/11/2011] [Accepted: 02/20/2012] [Indexed: 02/02/2023]  Open
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Target discovery from data mining approaches. Drug Discov Today 2012;17 Suppl:S16-23. [DOI: 10.1016/j.drudis.2011.12.006] [Citation(s) in RCA: 31] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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Müller H, Freytag JC, Leser U. Improving data quality by source analysis. ACM JOURNAL OF DATA AND INFORMATION QUALITY 2012. [DOI: 10.1145/2107536.2107538] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
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Greene CS, Troyanskaya OG. Accurate evaluation and analysis of functional genomics data and methods. Ann N Y Acad Sci 2012;1260:95-100. [PMID: 22268703 DOI: 10.1111/j.1749-6632.2011.06383.x] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
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Wade TD, Hum RC, Murphy JR. A Dimensional Bus model for integrating clinical and research data. J Am Med Inform Assoc 2011;18 Suppl 1:i96-102. [PMID: 21856687 PMCID: PMC3241170 DOI: 10.1136/amiajnl-2011-000339] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/27/2011] [Accepted: 07/11/2011] [Indexed: 11/04/2022]  Open
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Malin B, Loukides G, Benitez K, Clayton EW. Identifiability in biobanks: models, measures, and mitigation strategies. Hum Genet 2011;130:383-92. [PMID: 21739176 PMCID: PMC3621020 DOI: 10.1007/s00439-011-1042-5] [Citation(s) in RCA: 58] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/25/2011] [Accepted: 06/12/2011] [Indexed: 12/29/2022]
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Sarkar IN, Butte AJ, Lussier YA, Tarczy-Hornoch P, Ohno-Machado L. Translational bioinformatics: linking knowledge across biological and clinical realms. J Am Med Inform Assoc 2011;18:354-7. [PMID: 21561873 PMCID: PMC3128415 DOI: 10.1136/amiajnl-2011-000245] [Citation(s) in RCA: 39] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/14/2011] [Accepted: 04/19/2011] [Indexed: 11/30/2022]  Open
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Kim SS, Bhak J. Post-GWAS Strategies. Genomics Inform 2011. [DOI: 10.5808/gi.2011.9.1.001] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]  Open
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