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For: Jandhyala SM, Talukdar R, Subramanyam C, Vuyyuru H, Sasikala M, Reddy DN. Role of the normal gut microbiota. World J Gastroenterol 2015; 21(29): 8787-8803 [PMID: 26269668 DOI: 10.3748/wjg.v21.i29.8787]
URL: https://www.wjgnet.com/1007-9327/full/v21/i29/8787.htm
Number Citing Articles
1
Mengchao Jin, Zhiyuan Qian, Jiayu Yin, Weiting Xu, Xiang Zhou. The role of intestinal microbiota in cardiovascular diseaseJournal of Cellular and Molecular Medicine 2019; 23(4) doi: 10.1111/jcmm.14195
2
Nattavadee Pengrattanachot, Laongdao Thongnak, Anusorn Lungkaphin. The impact of prebiotic fructooligosaccharides on gut dysbiosis and inflammation in obesity and diabetes related kidney diseaseFood & Function 2022; 13(11) doi: 10.1039/D1FO04428A
3
Anna Skowrońska, Oliwia Gawlik-Kotelnicka, Aleksandra Margulska, Dominik Strzelecki. The Influence of Probiotic Supplementation on the Severity of Anxiety and Depressive Symptoms; Function and Composition of Gut Microbiota; and Metabolic, Inflammation, and Oxidative Stress Markers in Patients with Depression—A Study ProtocolMetabolites 2023; 13(2) doi: 10.3390/metabo13020182
4
Abigail Marsh, Graham Radford‐Smith, Merrilyn Banks, Anton Lord, Veronique Chachay. Dietary intake of patients with inflammatory bowel disease aligns poorly with traditional Mediterranean diet principlesNutrition & Dietetics 2022; 79(2) doi: 10.1111/1747-0080.12715
5
Reihaneh Zeinalian, Shonaz Ahmadikhatir, Ensieh Nasli Esfahani, Nazli Namazi, Bagher Larijani. The roles of personalized nutrition in obesity and diabetes management: a reviewJournal of Diabetes & Metabolic Disorders 2022; 21(1) doi: 10.1007/s40200-022-01016-0
6
Jerlin Stephy JohnBritto, Agostino Di Ciaula, Antonino Noto, Velia Cassano, Angela Sciacqua, Mohamad Khalil, Piero Portincasa, Leonilde Bonfrate. Gender-specific insights into the irritable bowel syndrome pathophysiology. Focus on gut dysbiosis and permeabilityEuropean Journal of Internal Medicine 2024; 125 doi: 10.1016/j.ejim.2024.03.011
7
Agathe Peyrottes, Garance Coquant, Loïc Brot, Dominique Rainteau, Philippe Seksik, Jean-Pierre Grill, Jean-Maurice Mallet. Anti-Inflammatory Effects of Analogues of N-Acyl Homoserine Lactones on Eukaryotic CellsInternational Journal of Molecular Sciences 2020; 21(24) doi: 10.3390/ijms21249448
8
V. B. Grinevich, V. G. Radchenko. Gut microbiota and metabolic syndromeExperimental and Clinical Gastroenterology 2020; 183(11) doi: 10.31146/1682-8658-ecg-183-11-11-19
9
Iara Cassandra V. Ibay, Elesa Poteres, Allison Isabelli, Kristina Martinez-Guryn. Nutritional Epigenomics2019;  doi: 10.1016/B978-0-12-816843-1.00024-2
10
Yajie Wang, Yuye Chen, Zihao Xiao, Yuanhui Shi, Cong Fu, Yuhan Cao. Fecal microbiota transplantation modulates myeloid-derived suppressor cells and attenuates renal fibrosis in a murine modelRenal Failure 2025; 47(1) doi: 10.1080/0886022X.2025.2480749
11
Girolamo Di Maio, Maria Giovanna Tafuri, Maria Casillo, Antonietta Messina, Salvatore Allocca, Ines Villano, Fiorenzo Moscatelli, Antonietta Monda, Marco La Marra, Vincenzo Monda. Physiological Regulation of Nutritional and Metabolic Biomarkers in Obesity: Implications for Precision NutritionNutrients 2026; 18(6) doi: 10.3390/nu18061014
12
Dragana Stanisic, Nevena Jeremic, Suravi Majumder, Sathnur Pushpakumar, Akash George, Mahavir Singh, Suresh C. Tyagi. High Fat Diet Dysbiotic Mechanism of Decreased Gingival Blood FlowFrontiers in Physiology 2021; 12 doi: 10.3389/fphys.2021.625780
13
Jinxing Li, Jincheng Zhao, Xiaolei Ze, Liang Li, Yapeng Li, Zhimo Zhou, Simou Wu, Wen Jia, Meixun Liu, Yun Li, Xi Shen, Fang He, Ruyue Cheng. Lacticaseibacillus paracasei 207-27 alters the microbiota–gut–brain axis to improve wearable device-measured sleep duration in healthy adults: a randomized, double-blind, placebo-controlled trialFood & Function 2024; 15(21) doi: 10.1039/D4FO01684J
14
Ying Zhou, Ziqing Ye, Junping Lu, Shijian Miao, Xiaolan Lu, Hua Sun, Jie Wu, Yuhuan Wang, Ying Huang. Long‐term changes in the gut microbiota after 14‐day bismuth quadruple therapy in penicillin‐allergic childrenHelicobacter 2020; 25(5) doi: 10.1111/hel.12721
15
Heather K. Hughes, Destanie Rose, Paul Ashwood. The Gut Microbiota and Dysbiosis in Autism Spectrum DisordersCurrent Neurology and Neuroscience Reports 2018; 18(11) doi: 10.1007/s11910-018-0887-6
16
Christina Wimmer-Scherr, Bernard Taminiau, Benoît Renaud, Gunther van Loon, Katrien Palmers, Dominique Votion, Hélène Amory, Georges Daube, Carla Cesarini. Comparison of Fecal Microbiota of Horses Suffering from Atypical Myopathy and Healthy Co-GrazersAnimals 2021; 11(2) doi: 10.3390/ani11020506
17
Md Mohiuddin. Chronic Antibiotic Use, Gut Microbiota Dysbiosis, and Increased Risk of Colorectal Cancer: An Emerging ThreatHealth Science Reports 2026; 9(2) doi: 10.1002/hsr2.71866
18
Luís Cláudio Lima de Jesus, Fernanda Alvarenga Lima, Nina Dias Coelho-Rocha, Tales Fernando da Silva, Júlia Paz, Vasco Azevedo, Pamela Mancha-Agresti, Mariana Martins Drumond. The Health Benefits of Foods - Current Knowledge and Further Development2020;  doi: 10.5772/intechopen.88325
19
Kara A. Tinker, Elizabeth A. Ottesen, P. D. Schloss. The Core Gut Microbiome of the American Cockroach, Periplaneta americana, Is Stable and Resilient to Dietary ShiftsApplied and Environmental Microbiology 2016; 82(22) doi: 10.1128/AEM.01837-16
20
Dagmara Woźniak, Wojciech Cichy, Juliusz Przysławski, Sławomira Drzymała-Czyż. The role of microbiota and enteroendocrine cells in maintaining homeostasis in the human digestive tractAdvances in Medical Sciences 2021; 66(2) doi: 10.1016/j.advms.2021.05.003
21
Kavita Rani, Jitendra Kumar, Sonia Sangwan, Nampher Masharing, Murli Dhar Mitra, H.B. Singh. Dietary Fibers2022;  doi: 10.5772/intechopen.99586
22
Chinmay T. Jani, Kyle Edwards, Charmi Bhanushali, Xena Zheng, Ana S. Salazar, Gilberto Lopes, Dionysios C. Watson. Leveraging beneficial microbiome-immune interactions via probiotic use in cancer immunotherapyFrontiers in Immunology 2025; 16 doi: 10.3389/fimmu.2025.1713382
23
Joanna W. A. M. Bosmans, Audrey C. H. M. Jongen, Nicole D. Bouvy, Joep P. M. Derikx. Colorectal anastomotic healing: why the biological processes that lead to anastomotic leakage should be revealed prior to conducting intervention studiesBMC Gastroenterology 2015; 15(1) doi: 10.1186/s12876-015-0410-3
24
Livia G. Fregolente, Fabrice N. Roth, Jan D. Warncke, Andrew J. Macpherson, Bahtiyar Yilmaz, Claudio L.A. Bassetti. The gut-sleep connection: a scoping review into microbiome alterations in sleep-wake and circadian disordersSleep Medicine 2026; 147 doi: 10.1016/j.sleep.2026.109136
25
Athanasia Ioannou, Maryse D. Berkhout, Sharon Y. Geerlings, Clara Belzer. Akkermansia muciniphila: biology, microbial ecology, host interactions and therapeutic potentialNature Reviews Microbiology 2025; 23(3) doi: 10.1038/s41579-024-01106-1
26
Nurhan Unusan. Essential oils and microbiota: Implications for diet and weight controlTrends in Food Science & Technology 2020; 104 doi: 10.1016/j.tifs.2020.07.014
27
Shvetank Bhatt, K. Anitha, Sujit Kumar Sah, Nishant Prasad Apte, Sakina. Mullamitha, Jamila Chechatwala. Advanced Drug Delivery Systems for Colonic Disorders2024;  doi: 10.1016/B978-0-443-14044-0.00013-2
28
Veeksha V Shetty, Shilpa S Shetty. Exploring the gut microbiome and head and neck cancer interplayPathology - Research and Practice 2024; 263 doi: 10.1016/j.prp.2024.155603
29
Sumit Sharma, Vivek R. Sinha. Current pharmaceutical strategies for efficient site specific delivery in inflamed distal intestinal mucosaJournal of Controlled Release 2018; 272 doi: 10.1016/j.jconrel.2018.01.003
30
Jifang Liu, Zhang Ye, Yi Zhang, Shen You, Siqi Sun, Lin Lu, Wan Su, Jie Liu, Jun Pu, Hui Pan, Huijuan Zhu, Kan Deng, Yong Yao, Xiaomin Hu, Shuyang Zhang. Multi-omics study reveals gut microbiota dysbiosis and tryptophan metabolism alterations in GH-PitNET progressionScientific Reports 2025; 15(1) doi: 10.1038/s41598-025-07812-x
31
Ya Deng, Xiaolu Yuan, XianMin Lu, Jiangbo Wu, Chen Luo, Ting Zhang, Qi Liu, Siqi Tang, Zhuo Li, Xingyi Mu, Yanxia Hu, Qian Du, Jingyu Xu, Rui Xie. The Use of Gut Organoids: To Study the Physiology and Disease of the Gut MicrobiotaJournal of Cellular and Molecular Medicine 2025; 29(4) doi: 10.1111/jcmm.70330
32
Wuwen Feng, Juan Liu, Lihua Huang, Yuzhu Tan, Cheng Peng. Gut microbiota as a target to limit toxic effects of traditional Chinese medicine: Implications for therapyBiomedicine & Pharmacotherapy 2021; 133 doi: 10.1016/j.biopha.2020.111047
33
Yuting Zhang, Lu Cheng, Yanan Liu, Shengnan Zhan, Zufang Wu, Songmei Luo, Xin Zhang. Dietary flavonoids: a novel strategy for the amelioration of cognitive impairment through intestinal microbiotaJournal of the Science of Food and Agriculture 2023; 103(2) doi: 10.1002/jsfa.12151
34
Dilshad Jahan, Ed Peile, Md Arif Sheikh, Salequl Islam, Sharlene Parasnath, Paras Sharma, Katia Iskandar, Sameer Dhingra, Jaykaran Charan, Timothy Craig Hardcastle, Nandeeta Samad, Tajkera Sultana Chowdhury, Siddhartha Dutta, Mainul Haque. Is it time to reconsider prophylactic antimicrobial use for hematopoietic stem cell transplantation? a narrative review of antimicrobials in stem cell transplantationExpert Review of Anti-infective Therapy 2021; 19(10) doi: 10.1080/14787210.2021.1902304
35
Rodrigo Soares da Silva, Igor Henrique Rodrigues de Paiva, Ingrid Prata Mendonça, José Roberto Botelho de Souza, Norma Lucena-Silva, Christina Alves Peixoto. Anorexigenic and anti-inflammatory signaling pathways of semaglutide via the microbiota–gut––brain axis in obese miceInflammopharmacology 2025; 33(2) doi: 10.1007/s10787-024-01603-y
36
Algül Dilara Dokumacı. Effects of Antibiotics on Intestinal Microbiota and Potential Treatment OptionsUludağ Üniversitesi Tıp Fakültesi Dergisi 2025; 51(1) doi: 10.32708/uutfd.1599099
37
Chiara Paciolla, Michele Manganelli, Mariagiovanna Di Chiano, Francesca Montenegro, Anna Gallone, Fabio Sallustio, Gabriella Guida. Valeric Acid: A Gut-Derived Metabolite as a Potential Epigenetic Modulator of Neuroinflammation in the Gut–Brain AxisCells 2025; 14(22) doi: 10.3390/cells14221823
38
Yuanyuan Liu, Dongmei Li, Li Ma, Yiyang Wen, Dongmei Shi. The barrier and protective functions of intestinal mucin in defense against Candida albicansFrontiers in Microbiology 2025; 16 doi: 10.3389/fmicb.2025.1561004
39
Mamali Das, Chandramohan Kiruthiga, R. Beema Shafreen, Kathiresan Nachammai, Chandrabose Selvaraj, K. Langeswaran. Harnessing the human microbiome and its impact on immuno-oncology and nanotechnology for next-generation cancer therapiesEuropean Journal of Pharmacology 2025; 996 doi: 10.1016/j.ejphar.2025.177436
40
Shasha An, Zhiping Zhen, Shijiao Wang, Mingze Sang, Shuai Zhang. Intestinal Microbiota Is a Key Target for Load Swimming to Improve Anxiety Behavior and Muscle Strength in Shank 3-/- RatsMolecular Neurobiology 2024; 61(12) doi: 10.1007/s12035-023-03670-8
41
Zhengxing Jiang, Jinping Hou, Xiaohong Die, Wei Liu, Yujie Wang, Hongyang Li, Wei Feng, Yi Wang. The association between short-term postoperative complications and bowel function after surgery for Hirschsprung diseaseBMC Pediatrics 2025; 25(1) doi: 10.1186/s12887-025-05861-9
42
Ruoran Shi, Fazheng Yu, Xueyu Hu, Yan Liu, Yuanyuan Jin, Honglin Ren, Shiying Lu, Jian Guo, Jiang Chang, Yansong Li, Zengshan Liu, Xiaoxu Wang, Pan Hu. Protective Effect of Lactiplantibacillus plantarum subsp. plantarum SC-5 on Dextran Sulfate Sodium—Induced Colitis in MiceFoods 2023; 12(4) doi: 10.3390/foods12040897
43
Mengqi Wang, Xiaoyan Feng, Yu Zhao, Yuzhi Lan, Hengyi Xu. Indole-3-acetamide from gut microbiota activated hepatic AhR and mediated the remission effect of Lactiplantibacillus plantarum P101 on alcoholic liver injury in miceFood & Function 2023; 14(23) doi: 10.1039/D3FO03585A
44
Advances in Microbial Nanotechnology2026;  doi: 10.1016/B978-0-443-31526-8.00003-0
45
Aranyak Ram, Dibyojyoti Bhattacharjee, Sk Mahbub Alam, Snehasis Jana, Rohan Pal. A Review on the Resistance of Probiotic Microorganisms to AntibioticsAsian Journal of Pharmacy and Technology 2024;  doi: 10.52711/2231-5713.2024.00054
46
Li Zhang, Delin Li, Yongsheng Zhang, Wenqi Hu, Haoyue Lv, Xiaodong Zhang, Hongyu Zhang. Changes in the gut microbiota of esophageal carcinoma patients based on 16S rRNA gene sequencing: a systematic review and meta-analysisFrontiers in Oncology 2024; 14 doi: 10.3389/fonc.2024.1366975
47
Xueyang Li, Cong He, Nianshuang Li, Ling Ding, Hongyan Chen, Jianhua Wan, Xiaoyu Yang, Liang Xia, Wenhua He, Huifang Xiong, Xu Shu, Yin Zhu, Nonghua Lu. The interplay between the gut microbiota and NLRP3 activation affects the severity of acute pancreatitis in miceGut Microbes 2020; 11(6) doi: 10.1080/19490976.2020.1770042
48
Alberto Di Napoli, Luca Pasquini, Emiliano Visconti, Maria Vaccaro, Maria Camilla Rossi-Espagnet, Antonio Napolitano. Gut-brain axis and neuroplasticity in health and disease: a systematic reviewLa radiologia medica 2024; 130(3) doi: 10.1007/s11547-024-01938-0
49
Rida Abid Hasan, Ayesha Zia. Benign Hematologic Disorders in Children2021;  doi: 10.1007/978-3-030-49980-8_20
50
Maliha Naseer, Shiva Poola, Suleyman Uraz, Veysel Tahan. Therapeutic Effects of Prebiotics on Constipation: A Schematic ReviewCurrent Clinical Pharmacology 2020; 15(3) doi: 10.2174/1574884715666200212125035
51
Mega Obukohwo Oyowvi, Ayodeji Folorunsho Ajayi, Odewale O. Comfort. Ketogenic Diet Impacts Epilepsy via Alterations in Gut Microbiome Composition: A ReviewBratislava Medical Journal 2025; 126(12) doi: 10.1007/s44411-025-00368-2
52
Karina Oliveira Santos, Ligia Yukie Sassaki, Maiara Brusco De Freitas, Julio Pinheiro Baima, Murilo Henrique Faria, Anna Luisa Bizotto, Júlia Pardini Benício, Ana Carolina Magalhães. Salivary Biomarkers in Crohn’s Disease and Ulcerative Colitis: A Scoping Review and Evidence MapInternational Journal of Molecular Sciences 2025; 26(22) doi: 10.3390/ijms262211195
53
Diya Bhalla, Susha Dinesh, Sameer Sharma, Gonchigar Jayanna Sathisha. Gut-Brain Axis Modulation of Metabolic Disorders: Exploring the Intertwined Neurohumoral Pathways and Therapeutic ProspectsNeurochemical Research 2024; 49(4) doi: 10.1007/s11064-023-04084-7
54
Bianli Li, Yue Ma, Xuhui Wang, Di Zhao, Ziqin Wang, Guoyang Wang, Chunyi Li, Lin Yang, Hui Ji, Kunmei Liu, Qiuyuan Chen, Yong Yang, Wenqian Ma, Jianbin Du, Lei Ma, Lianxiang Zhang, Yuanyuan Qiang. Ketogenic Diets Alter the Gut Microbiome, Resulting in Decreased Susceptibility to and Cognitive Impairment in Rats with Pilocarpine-Induced Status EpilepticusNeurochemical Research 2024; 49(10) doi: 10.1007/s11064-024-04168-y
55
Aneta Kiecka, Marian Szczepanik. Proton pump inhibitor-induced gut dysbiosis and immunomodulation: current knowledge and potential restoration by probioticsPharmacological Reports 2023; 75(4) doi: 10.1007/s43440-023-00489-x
56
A. V. Stavrovskaya, V. N. Danilenko, D. N. Voronkov, A. S. Gushchina, M. V. Marsova, A. S. Olshansky, N. G. Yamshikova, S. N. Illarioshkin. Pharmabiotic Based on Lactobacillus fermentum Strain U-21 Modulates the Toxic Effect of 1-Methyl-4-Phenyl-1,2,3,6-Tetrahydropyridine as Parkinsonism Inducer in MiceHuman Physiology 2021; 47(8) doi: 10.1134/S0362119721080120
57
Héla Mkaouar, Vincent Mariaule, Soufien Rhimi, Juan Hernandez, Aicha Kriaa, Amin Jablaoui, Nizar Akermi, Emmanuelle Maguin, Adam Lesner, Brice Korkmaz, Moez Rhimi. Gut Serpinome: Emerging Evidence in IBDInternational Journal of Molecular Sciences 2021; 22(11) doi: 10.3390/ijms22116088
58
Michael Rohr, Chandrakala Aluganti Narasimhulu, Dhara Sharma, Mitsushita Doomra, Aladdin Riad, Saleh Naser, Sampath Parthasarathy. Inflammatory Diseases of the GutJournal of Medicinal Food 2018; 21(2) doi: 10.1089/jmf.2017.0138
59
Brianna N. Maslen, Lesley A. Gray, Seyed A. Ghorashi, Jason D. White, Michael A. Campbell, Sameer D. Pant. Temporal Changes in the Faecal Microbiota of Beef Cattle on Feedlot PlacementAnimals 2022; 12(19) doi: 10.3390/ani12192500
60
Ziyi Zhang, Xiaoyu Chen, Yuh Jiun Loh, Xin Yang, Chenhong Zhang. The effect of calorie intake, fasting, and dietary composition on metabolic health and gut microbiota in miceBMC Biology 2021; 19(1) doi: 10.1186/s12915-021-00987-5
61
Patcharaporn Boonroumkaew, Nongnapas Kanchanangkul, Rutchanee Rodpai, Lakkhana Sadaow, Oranuch Sanpool, Penchom Janwan, Tongjit Thanchomnang, David Blair, Pewpan M. Intapan, Wanchai Maleewong. Great Diversity of Bacterial Microbiota in Thai Local Food: “Tai-Pla”, the Salty Fermented Fish-Entrail SauceFoods 2025; 14(23) doi: 10.3390/foods14234104
62
Shiqi Zhang, Pinglan Li, Suwon Lee, Yu Wang, Chunming Tan, Nan Shang. Weizmannia coagulans: an Ideal Probiotic for Gut Health Food Science and Human Wellness 2023;  doi: 10.26599/FSHW.2022.9250002
63
Pranati Sharma, Abhishek Agrawal. Does modern research validate the ancient wisdom of gut flora and brain connection? A literature review of gut dysbiosis in neurological and neurosurgical disorders over the last decadeNeurosurgical Review 2022; 45(1) doi: 10.1007/s10143-021-01516-2
64
Md Nannur Rahman, Nilakshi Barua, Martha C.F. Tin, Priyanga Dharmaratne, Sunny H. Wong, Margaret Ip. The use of probiotics and prebiotics in decolonizing pathogenic bacteria from the gut; a systematic review and meta-analysis of clinical outcomesGut Microbes 2024; 16(1) doi: 10.1080/19490976.2024.2356279
65
Kai-Feng Meng, Li-Guo Ding, Sha Wu, Zheng-Ben Wu, Gao-Feng Cheng, Xue Zhai, Ru-Han Sun, Zhen Xu. Interactions Between Commensal Microbiota and Mucosal Immunity in Teleost Fish During Viral Infection With SVCVFrontiers in Immunology 2021; 12 doi: 10.3389/fimmu.2021.654758
66
Mu Jin, Temitope Keku, Amber McCoy, Jordyn A. Brown, Marc Peterson, Jamie Hunter, Shawn Smith, Stephenie Black-Grant, Melinda S. Yates, Anne F. Peery, Victoria L. Bae-Jump, M. Andrea Azcarate-Peril, Stephanie M. Engel, Andrew F. Olshan, Hazel B. Nichols, Franck Carbonero. Stool and vaginal microbiome profiles patterns among Black and White endometrial cancer survivors: A pilot study in North CarolinaPLOS One 2026; 21(1) doi: 10.1371/journal.pone.0336772
67
Xue Guo, Chen Huang, Jing Xu, Haoming Xu, Le Liu, Hailan Zhao, Jiaqi Wang, Wenqi Huang, Wu Peng, Ye Chen, Yuqiang Nie, Yongjian Zhou, Youlian Zhou. Gut Microbiota Is a Potential Biomarker in Inflammatory Bowel DiseaseFrontiers in Nutrition 2022; 8 doi: 10.3389/fnut.2021.818902
68
Michaela E. Johnson, Andrea Stringer, Larisa Bobrovskaya. Rotenone induces gastrointestinal pathology and microbiota alterations in a rat model of Parkinson’s diseaseNeuroToxicology 2018; 65 doi: 10.1016/j.neuro.2018.02.013
69
Alessia Favaron, Youssef Abdalla, Laura E. McCoubrey, Laxmi Prasanna Nandiraju, David Shorthouse, Simon Gaisford, Abdul W. Basit, Mine Orlu. Exploring the interactions of JAK inhibitor and S1P receptor modulator drugs with the human gut microbiome: Implications for colonic drug delivery and inflammatory bowel diseaseEuropean Journal of Pharmaceutical Sciences 2024; 200 doi: 10.1016/j.ejps.2024.106845
70
T. Sánchez-Moya, R. López-Nicolás, D. Planes, C. A. González-Bermúdez, G. Ros-Berruezo, C. Frontela-Saseta. In vitro modulation of gut microbiota by whey protein to preserve intestinal healthFood & Function 2017; 8(9) doi: 10.1039/C7FO00197E
71
Veeraya Bamrung, Panchan Sitthicharoenchai. The evolving story of Streptococcus gallolyticus: classification, pathogenesis, role in human and animal disease, and laboratory diagnosticsFrontiers in Microbiology 2026; 17 doi: 10.3389/fmicb.2026.1765252
72
Jesús Delgado Ojeda, Alicia Santamaría Orleans. Early life nutrition and immunityNutrición Hospitalaria 2023;  doi: 10.20960/nh.04948
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Peter Colin Gregory, Katrin Hoffmann, Josef Kamphues, Anne Möeler. The Pancreatic Duct Ligated (Mini)pig as a Model for Pancreatic Exocrine Insufficiency in ManPancreas 2016; 45(9) doi: 10.1097/MPA.0000000000000674
74
Zenawork Sahle, Getabalew Engidaye, Demissew Shenkute Gebreyes, Behailu Adenew, Tsegahun Asfaw Abebe. Fecal microbiota transplantation and next-generation therapies: A review on targeting dysbiosis in metabolic disorders and beyondSAGE Open Medicine 2024; 12 doi: 10.1177/20503121241257486
75
Tien-Hsiang Kuo, Ping-Hsun Wu, Po-Yu Liu, Yun-Shiuan Chuang, Chi-Jung Tai, Mei-Chuan Kuo, Yi-Wen Chiu, Yi-Ting Lin. Identification of Gut Microbiome Signatures Associated with Serotonin Pathway in Tryptophan Metabolism of Patients Undergoing HemodialysisInternational Journal of Molecular Sciences 2025; 26(21) doi: 10.3390/ijms262110463
76
Paraclostridium dentum, a novel species with pathogenic features isolated from human dental plaque sampleAnaerobe 2020; 65 doi: 10.1016/j.anaerobe.2020.102239
77
Alice Njolke Mafe, Great Iruoghene Edo, Patrick Othuke Akpoghelie, Tayser Sumer Gaaz, Emad Yousif, Khalid Zainulabdeen, Endurance Fegor Isoje, Ufuoma Augustina Igbuku, Rapheal Ajiri Opiti, Yasal Garba, Arthur Efeoghene Athan Essaghah, Dina S. Ahmed, Huzaifa Umar. Probiotics and Food Bioactives: Unraveling Their Impact on Gut Microbiome, Inflammation, and Metabolic HealthProbiotics and Antimicrobial Proteins 2025; 17(4) doi: 10.1007/s12602-025-10452-2
78
Haihua Yu, Yueqin Xie, Bing Wu, Hua Zhao, Xiaoling Chen, Gang Tian, Guangmang Liu, Jingyi Cai, Gang Jia. Dietary supplementation of ferrous glycinate improves intestinal barrier function by modulating microbiota composition in Cherry Valley ducksAnimal Nutrition 2022; 11 doi: 10.1016/j.aninu.2022.07.007
79
Zhiming Xu, Zheng Xie, Jianguang Sun, Shilei Huang, Yangyang Chen, Chengxiang Li, Xing Sun, Bicheng Xia, Lingyang Tian, Caijuan Guo, Feng Li, Guofu Pi. Gut Microbiome Reveals Specific Dysbiosis in Primary OsteoporosisFrontiers in Cellular and Infection Microbiology 2020; 10 doi: 10.3389/fcimb.2020.00160
80
Yumeng Zhang, Jin Zhao, Yunlong Qin, Yuwei Wang, Zixian Yu, Xiaoxuan Ning, Shiren Sun. Specific alterations of gut microbiota in patients with membranous nephropathy: A systematic review and meta-analysisFrontiers in Physiology 2022; 13 doi: 10.3389/fphys.2022.909491
81
Devi Datt Joshi, Lokesh Deb, Kanak Kaul, Bharat G. Somkuwar, Virendra Singh Rana, Rajni Singh. Relevance of Indian Traditional Herbal Brews for Gut Microbiota BalanceIndian Journal of Microbiology 2024; 64(4) doi: 10.1007/s12088-024-01251-4
82
Aniruddha Chatterjee, Zarqua Jamal, Joydeep Das, Ananya Banerjee, Urmi Chatterji. The Imperceptible Contagion: Arsenic as a Neuro-Immune-Endocrine DisruptorProceedings of the Zoological Society 2021; 74(4) doi: 10.1007/s12595-021-00393-3
83
Yanping Wu, Cong Huang, Yue Wei, Zhaofeng Kang, Weihong Zhang, Min Zhou, Rongjun Chen, Jinfang Xie, Ligen Xiong. Integrative analysis revealed the effect of gut microbiota and metabolites on growth performance of Ningdu hybrid chickenPoultry Science 2025; 104(12) doi: 10.1016/j.psj.2025.105891
84
John Jeyaraj Kiruba, Thimma Gopalram Vardhani, Amuthavel Aarthy, Sundaramoorthy Iswaryalakshmi, Ponnaiah Brundha, Muthukannan Aishwarya Lakshmi, Uthandakalaipandian Ramesh, Arokiasamy Justin Thenmozhi, Mariakuttikan Jayalakshmi. Nutraceuticals for Alzheimer's Disease: A Promising Therapeutic ApproachNutritional Neurosciences 2023;  doi: 10.1007/978-981-99-0677-2_14
85
Lejaniya Abdul Kalam Saleena, Sui Kiat Chang, Khanom Simarani, Kantha Deivi Arunachalam, Rarinthorn Thammakulkrajang, Yu Hsuan How, Liew Phing Pui. A comprehensive review of Bifidobacterium spp : as a probiotic, application in the food and therapeutic, and forthcoming trends Critical Reviews in Microbiology 2024; 50(5) doi: 10.1080/1040841X.2023.2243617
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Yujie Zhang, Jianbo Qing, Yasin Abdi Saed, Yafeng Li. Gut microbiota implication in diabetic kidney disease: mechanisms and novel therapeutic strategiesRenal Failure 2025; 47(1) doi: 10.1080/0886022X.2025.2517402
87
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Pallavi Kompella, Karen M. Vasquez. Obesity and cancer: A mechanistic overview of metabolic changes in obesity that impact genetic instabilityMolecular Carcinogenesis 2019; 58(9) doi: 10.1002/mc.23048
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Junhao Zhang, Zhiheng Shu, Sixiao Lv, Qingwen Zhou, Yuanhao Huang, Yingjie Peng, Jun Zheng, Yi Zhou, Chao Hu, Shile Lan. Fermented Chinese Herbs Improve the Growth and Immunity of Growing Pigs through Regulating Colon Microbiota and MetabolitesAnimals 2023; 13(24) doi: 10.3390/ani13243867
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Woonhak Ji, Inho Cho, Sang Seok Joo, Moongyeong Jung, Chae Won Lee, June Hyeok Yoon, Su Hyun An, Myunghoo Kim, Changsu Kong. Gut Microbiome and Gut Immunity in Broiler Chickens Fed Allium hookeri Root Powder from Day 10 to 28Korean Journal of Poultry Science 2023; 50(3) doi: 10.5536/KJPS.2023.50.3.171
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Katie Y. Lee, Cory L. Schlesener, Sharif S. Aly, Bihua C. Huang, Xunde Li, Edward R. Atwill, Bart C. Weimer. Whole genome sequence analysis reveals high genomic diversity and potential host-driven adaptations among multidrug-resistant Escherichia coli from pre-weaned dairy calvesFrontiers in Microbiology 2024; 15 doi: 10.3389/fmicb.2024.1420300
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Sabrina Donati Zeppa, Deborah Agostini, Marco Gervasi, Giosuè Annibalini, Stefano Amatori, Fabio Ferrini, Davide Sisti, Giovanni Piccoli, Elena Barbieri, Piero Sestili, Vilberto Stocchi. Mutual Interactions among Exercise, Sport Supplements and MicrobiotaNutrients 2019; 12(1) doi: 10.3390/nu12010017
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Amin Tahoun, Hisayoshi Masutani, Hanem El-Sharkawy, Trudi Gillespie, Ryo P. Honda, Kazuo Kuwata, Mizuho Inagaki, Tomio Yabe, Izumi Nomura, Tohru Suzuki. Capsular polysaccharide inhibits adhesion of Bifidobacterium longum 105-A to enterocyte-like Caco-2 cells and phagocytosis by macrophagesGut Pathogens 2017; 9(1) doi: 10.1186/s13099-017-0177-x
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Rajnish Prakash Singh, Max Kolton, Mayan Boker, Noy Bar David, Stefan Green, Aharon Helman, Oren Tirosh, Zvi Hayouka. Probiotic human alcohol dehydrogenase-4 expressing bacteria protects from diet-induced obesity and metabolic impairment: a new concept of disease preventionExploration of Digestive Diseases 2022;  doi: 10.37349/edd.2022.00009
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Zhibin Liu, Wouter J. C. de Bruijn, Marieke E. Bruins, Jean-Paul Vincken. Reciprocal Interactions between Epigallocatechin-3-gallate (EGCG) and Human Gut Microbiota In VitroJournal of Agricultural and Food Chemistry 2020; 68(36) doi: 10.1021/acs.jafc.0c03587
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Yao-Bo Zeng, Xun Deng, Li-Sha Shen, Yong Yang, Xing Zhou, Lianbao Ye, Sibao Chen, Da-Jian Yang, Guo-Qing Chen. Advances in plant-derived extracellular vesicles: isolation, composition, and biological functionsFood & Function 2024; 15(23) doi: 10.1039/D4FO04321A
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Marialaura Fanelli, Vita Petrone, Margherita Buonifacio, Elisabetta Delibato, Emanuela Balestrieri, Sandro Grelli, Antonella Minutolo, Claudia Matteucci. Multidistrict Host–Pathogen Interaction during COVID-19 and the Development Post-Infection Chronic InflammationPathogens 2022; 11(10) doi: 10.3390/pathogens11101198
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Chao Guo, Shiqi Zhang, Huan Zhang, Li Chen, Shuaixin Gao, Mengyang Xu, Haifei Shi, Jiangjiang Zhu. Per- and polyfluoroalkyl substances (PFAS) disrupt gut microbiome composition and metabolism in metabolic syndrome: Evidence from a host-free in vitro colonic modelEnvironmental Pollution 2025; 386 doi: 10.1016/j.envpol.2025.127189
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Mariusz Kaczmarczyk, Ulrike Löber, Karolina Adamek, Dagmara Węgrzyn, Karolina Skonieczna-Żydecka, Damian Malinowski, Igor Łoniewski, Lajos Markó, Thomas Ulas, Sofia K. Forslund, Beata Łoniewska. The gut microbiota is associated with the small intestinal paracellular permeability and the development of the immune system in healthy children during the first two years of lifeJournal of Translational Medicine 2021; 19(1) doi: 10.1186/s12967-021-02839-w
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Hui-Ling Dong, Sheng-Xiang Zhang, Zhuo-Hua Chen, Hui Tao, Xue Li, Jian-Feng Qiu, Wen-Zhao Cui, Yang-Hu Sima, Wei-Zheng Cui, Shi-Qing Xu. Differences in gut microbiota between silkworms (Bombyx mori) reared on fresh mulberry (Morus albavar. multicaulis) leaves or an artificial dietRSC Advances 2018; 8(46) doi: 10.1039/C8RA04627A
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Francesco Marrocco, Rizwan Khan, Alice Reccagni, Xingzi Lin, Mary Delli Carpini, Valerio Iebba, Giuseppina D’Alessandro, Cristina Limatola. Fecal or bacterial transplantation in mice transfer environment-induced brain plasticity and associated behavioral changesFrontiers in Physiology 2025; 16 doi: 10.3389/fphys.2025.1572854
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Tatiana Dandolini Saccon, Ravinder Nagpal, Hariom Yadav, Marcelo Borges Cavalcante, Allancer Divino de Carvalho Nunes, Augusto Schneider, Adam Gesing, Brian Hughes, Matthew Yousefzadeh, Tamar Tchkonia, James L Kirkland, Laura J Niedernhofer, Paul D Robbins, Michal M Masternak, Rozalyn M Anderson. Senolytic Combination of Dasatinib and Quercetin Alleviates Intestinal Senescence and Inflammation and Modulates the Gut Microbiome in Aged MiceThe Journals of Gerontology: Series A 2021; 76(11) doi: 10.1093/gerona/glab002
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Alexis Kalu, Swapan K. Ray. Epigallocatechin-3-Gallate, Quercetin, and Kaempferol for Treatment of Parkinson’s Disease Through Prevention of Gut Dysbiosis and Attenuation of Multiple Molecular Mechanisms of PathogenesisBrain Sciences 2025; 15(2) doi: 10.3390/brainsci15020144
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Hadar Neuman, Omry Koren. The Human Microbiome in Early Life2021;  doi: 10.1016/B978-0-12-818097-6.00001-8
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Ai-Ru Liu, Shao-Peng Yang, Xiao-Lan Zhang. Effects of interaction between mesenchymal stem cells and gut microbiota in treatment of inflammatory bowel diseaseWorld Chinese Journal of Digestology 2021; 29(6) doi: 10.11569/wcjd.v29.i6.312
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Lorayne Ann Chua-Lim, Amor S. Vergara, Romina M. Ulamarulama, Ernie Kharl A. Valencia, April Rose N. Vergara, Genevieve Dable-Tupas, Carmelita Escalante-Llavore. Role of Nutrigenomics in Modern-day Healthcare and Drug Discovery2023;  doi: 10.1016/B978-0-12-824412-8.00001-1
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Shichao Liu, Zhiyuan Tai, Muzhi Li, Rui Zhang, Guobin Shao, Jiatai Guo, Weixing Lu. Improving intestinal barrier function and intestinal microbiome of weaned piglets fed a low-protein diet through tryptophan and N-Acetylglutamic acid supplementationTropical Animal Health and Production 2025; 57(5) doi: 10.1007/s11250-025-04490-9
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Dario Spanu, Andrea Pretta, Eleonora Lai, Mara Persano, Clelia Donisi, Stefano Mariani, Marco Dubois, Marco Migliari, Giorgio Saba, Pina Ziranu, Valeria Pusceddu, Marco Puzzoni, Giorgio Astara, Mario Scartozzi. Hepatocellular carcinoma and microbiota: Implications for clinical management and treatmentWorld Journal of Hepatology 2022; 14(7): 1319-1332 doi: 10.4254/wjh.v14.i7.1319
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Caitlin Dreisbach, Hailey Morgan, Caroline Cochran, Adwoa Gyamfi, Wendy Ann Henderson, Stephanie Prescott. Metabolic and Microbial Changes Associated With Diet and Obesity During Pregnancy: What Can We Learn From Animal Studies?Frontiers in Cellular and Infection Microbiology 2022; 11 doi: 10.3389/fcimb.2021.795924
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Noah Greenman, Latifa S. Abdelli, Sayf Al-Deen Hassouneh, Sobur Ali, Catherine Johnston, Saleh A. Naser, Taj Azarian. Impact of propionic acid-rich diets on microbial composition of the murine gut microbiomeFrontiers in Microbiomes 2024; 3 doi: 10.3389/frmbi.2024.1451735
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M. Berard, K. Chassain, C. Méry, F. Gillaizeau, T. Carton, H. Humeau, N. Navasiolava, S. Rocour, L. Schurgers, M. Kempf, L. Martin. Changes in the gut microbiota of pseudoxanthoma elasticum patientsAnnales de Dermatologie et de Vénéréologie 2024; 151(3) doi: 10.1016/j.annder.2024.103290
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Zixuan Li, Lijuan Nie, Yong Li, Lu Yang, Lulu Jin, Baozhong Du, Juan Yang, Xulin Zhang, Huantian Cui, Ouzhu Luobu. Traditional Tibetan Medicine Twenty-Five Wei’er Tea Pills Ameliorate Rheumatoid Arthritis Based on Chemical Crosstalk Between Gut Microbiota and the HostFrontiers in Pharmacology 2022; 13 doi: 10.3389/fphar.2022.828920
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Archana Madhav, Rachel Bousfield, Joana Pereira-Dias, Claire Cormie, Sally Forrest, Jacqueline Keane, Leanne Kermack, Ellen Higginson, Gordon Dougan, Harry Spiers, Dunecan Massey, Lisa Sharkey, Charlotte Rutter, Jeremy Woodward, Neil Russell, Irum Amin, Andrew Butler, Kayleigh Atkinson, Tom Dymond, Josefin Bartholdson Scott, Stephen Baker, Effrossyni Gkrania-Klotsas. A metagenomic prospective cohort study on gut microbiome composition and clinical infection in small bowel transplantationGut Microbes 2024; 16(1) doi: 10.1080/19490976.2024.2323232
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Nicole A. Pescatore, Rebecca Pollak, Colleen S. Kraft, Jennifer G. Mulle, Colleen F. Kelley. Short Communication: Anatomic Site of Sampling and the Rectal Mucosal Microbiota in HIV Negative Men Who Have Sex with Men Engaging in Condomless Receptive Anal IntercourseAIDS Research and Human Retroviruses 2018; 34(3) doi: 10.1089/aid.2017.0206
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Anna Spyropoulou, Esmeralda Dushku, Eleni Iοannidou, Maria Athanasiadou, Charalampos Kotzamanidis, Nikolaos Passalis, Alexandra Staikou, Minas Yiangou. Characterization and determination of the immunomodulatory activity of intestinal microbiota microorganisms isolated from free-range Cornu aspersum snails in olive groves before and after aestivationDevelopmental & Comparative Immunology 2026; 181 doi: 10.1016/j.dci.2026.105670
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Huili Wei, Lin Wang, Zhichao An, Huidi Xie, Weijing Liu, Qing Du, Yan Guo, Xi Wu, Sicheng Li, Yang Shi, Xianhui Zhang, Hongfang Liu. QiDiTangShen granules modulated the gut microbiome composition and improved bile acid profiles in a mouse model of diabetic nephropathyBiomedicine & Pharmacotherapy 2021; 133 doi: 10.1016/j.biopha.2020.111061
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Elisabetta Bretto, Miquel Urpì-Ferreruela, Gherzon Rimer Casanova, Begoña González-Suárez. The Role of Gut Microbiota in Gastrointestinal Immune Homeostasis and Inflammation: Implications for Inflammatory Bowel DiseaseBiomedicines 2025; 13(8) doi: 10.3390/biomedicines13081807
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Zhimin Yu, Shixia Cai, Zhantao Shen, Guihao Chen, Yanchen Chen, Yifeng Liu, Xiaosheng Zhong. Bibliometric analysis of the trends in research on the link between gut microbiota and pancreatic cancerFrontiers in Cellular and Infection Microbiology 2026; 16 doi: 10.3389/fcimb.2026.1623945
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Manuel Plomer, Marcos III Perez, Dorothea Maren Greifenberg. Effect of Bacillus clausii Capsules in Reducing Adverse Effects Associated with Helicobacter pylori Eradication Therapy: A Randomized, Double-Blind, Controlled TrialInfectious Diseases and Therapy 2020; 9(4) doi: 10.1007/s40121-020-00333-2
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Zi-Ying Wang, Ping-Ping Gao, Ling Li, Ting-Ting Chen, Nan Li, Meng Qi, Sheng-Nan Zhang, Ya-Ping Xu, Yu-Han Wang, Shi-Hao Zhang, Ling-Ling Zhang, Wei Wei, Min Du, Wu-Yi Sun. Dextran sulfate sodium-induced gut microbiota dysbiosis aggravates liver injury in mice with S100-induced autoimmune hepatitisImmunology Letters 2023; 263 doi: 10.1016/j.imlet.2023.10.001
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Yohanes Tandoro, Hui-Fang Chiu, Chei-Ling Tan, Ming-Hong Hsieh, Yi-Wen Huang, Jianhua Yu, Li-Shu Wang, Chi-Ho Chan, Chin-Kun Wang. Black raspberry supplementation on overweight and Helicobacter pylori infected mild dementia patients a pilot studynpj Science of Food 2025; 9(1) doi: 10.1038/s41538-024-00356-w
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Litao Huang, Liting Deng, Changhui Liu, Enping Huang, Xiaolong Han, Cheng Xiao, Xiaomin Liang, Huilin Sun, Chao Liu, Ling Chen. Fecal microbial signatures of healthy Han individuals from three bio-geographical zones in GuangdongFrontiers in Microbiology 2022; 13 doi: 10.3389/fmicb.2022.920780
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Runbo Li, Yinghu Hao, Yubang Shen, Lang Gui, Biao Du, Lingli Xie, Jiale Li, Xiaoyan Xu. Impact of Microcystin-LR exposure on biochemical responses, transcriptomic profiles, gut microbiota, and growth performance in grass carp (Ctenopharyngodon idella)Journal of Environmental Sciences 2025; 157 doi: 10.1016/j.jes.2024.11.027
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Luke A. Durkin, Caroline E. Childs, Philip C. Calder. Omega-3 Polyunsaturated Fatty Acids and the Intestinal Epithelium—A ReviewFoods 2021; 10(1) doi: 10.3390/foods10010199
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Piyush Verma, Ravinder Kaushik, Ranjna Sirohi. Insights into recent advances in agro-waste derived xylooligosaccharides: production, purification, market, and health benefitsBiomass Conversion and Biorefinery 2025; 15(23) doi: 10.1007/s13399-024-05993-5
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Zhijia Zhou, Wenxuan Li, Yuelan Wu, Tao Wang, Jinghao Zhang, Liping You, Haoran Li, Chao Zheng, Yueqiu Gao, Xuehua Sun. Bidirectional Mendelian randomization links gut microbiota to primary biliary cholangitisScientific Reports 2024; 14(1) doi: 10.1038/s41598-024-79227-z
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J. S. Bell, J. I. Spencer, R. L. Yates, S. A. Yee, B. M. Jacobs, G. C. DeLuca. Invited Review: From nose to gut – the role of the microbiome in neurological diseaseNeuropathology and Applied Neurobiology 2019; 45(3) doi: 10.1111/nan.12520
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Elisaldo Mendes Cordeiro, Gustavo Vieira de Oliveira, Mônica Volino‐Souza, Otávio do Couto Velozo, Thiago Silveira Alvares. Effects of fish protein hydrolysate ingestion on postexercise aminoacidemia compared with whey protein hydrolysate in young individualsJournal of Food Science 2020; 85(1) doi: 10.1111/1750-3841.14970
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Sneha Dutta, Tapas K. Dutta, Pramod K. Nanda, Pubali Dhar, Arun K. Das, Arun K. Bhunia. Paradigm Shift of Microbiota-gut-brain Axis During Aging: Potential Role of Probiotics to Improve Cognitive DeclineProbiotics and Antimicrobial Proteins 2026;  doi: 10.1007/s12602-026-11136-1
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Krzysztof Grzymajlo. The Game for Three: Salmonella–Host–Microbiota Interaction ModelsFrontiers in Microbiology 2022; 13 doi: 10.3389/fmicb.2022.854112
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Hui Li, Ningshan Li, Qudong Lu, Jun Yang, Jiang Zhao, Qiong Zhu, Shanhong Yi, Weihua Fu, Tingting Luo, Jiawei Tang, Yi Zhang, Guoliang Yang, Zheng Liu, Jie Xu, Wei Chen, Jingzhen Zhu. Chronic alcohol-induced dysbiosis of the gut microbiota and gut metabolites impairs sperm quality in miceFrontiers in Microbiology 2022; 13 doi: 10.3389/fmicb.2022.1042923
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Maria Pallozzi, Valeria De Gaetano, Natalia Di Tommaso, Lucia Cerrito, Francesco Santopaolo, Leonardo Stella, Antonio Gasbarrini, Francesca Romana Ponziani. Role of Gut Microbial Metabolites in the Pathogenesis of Primary Liver CancersNutrients 2024; 16(14) doi: 10.3390/nu16142372
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Emil Ibragimov, Anni Øyan Pedersen, Liang Xiao, Susanna Cirera, Merete Fredholm, Peter Karlskov-Mortensen. Analysis of merged transcriptomic and genomic datasets to identify genes and pathways underlying residual feed intake in growing pigsScientific Reports 2022; 12(1) doi: 10.1038/s41598-022-26496-1
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Priyanka Brahmachary, Emelia A. Keim, Seth T. Walk, Meghan E. McGee-Lawrence, Ronald K. June. AhR signaling in joint homeostasis and diseaseBiochimie 2026;  doi: 10.1016/j.biochi.2026.03.003
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Stelios F. Assimakopoulos, Sanjay Bhagani, Ioanna Aggeletopoulou, Efthymios P. Tsounis, Emmanuel A. Tsochatzis. The role of gut barrier dysfunction in postoperative complications in liver transplantation: pathophysiological and therapeutic considerationsInfection 2024; 52(3) doi: 10.1007/s15010-024-02182-4
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Shuang Gao, Muhammad Imran Khan, Fadia Kalsoom, Zhen Liu, Yanxin Chen, Zhengli Chen. Role of gene regulation and inter species interaction as a key factor in gut microbiota adaptationArchives of Microbiology 2022; 204(6) doi: 10.1007/s00203-022-02935-5
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Minu S. Thomas, Christopher N. Blesso, Mariana C. Calle, Ock K. Chun, Michael Puglisi, Maria Luz Fernandez. Dietary Influences on Gut Microbiota with a Focus on Metabolic SyndromeMetabolic Syndrome and Related Disorders 2022; 20(8) doi: 10.1089/met.2021.0131
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Mohamed Hussain Syed Abuthakir, Velusamy Sharmila, Muthusamy Jeyam. Screening Balanites aegyptiaca for inhibitors against putative drug targets in Microsporum gypseum – Subtractive proteome, docking and simulation approachInfection, Genetics and Evolution 2021; 90 doi: 10.1016/j.meegid.2021.104755
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Safa Cyrus Fassihi, Rahmat Talukder, Reza Fassihi. Targeted Nanosystems for Therapeutic Applications: New Concepts, Dynamic Properties, Efficiency, and ToxicityACS Symposium Series 2019; 1309 doi: 10.1021/bk-2019-1309.ch013
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Josep M. Argilés, Britta Stemmler, Francisco J. López-Soriano, Silvia Busquets. Inter-tissue communication in cancer cachexiaNature Reviews Endocrinology 2019; 15(1) doi: 10.1038/s41574-018-0123-0
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Sidharth Mishra, Shaohua Wang, Ravinder Nagpal, Brandi Miller, Ria Singh, Subhash Taraphder, Hariom Yadav. Probiotics and Prebiotics for the Amelioration of Type 1 Diabetes: Present and Future PerspectivesMicroorganisms 2019; 7(3) doi: 10.3390/microorganisms7030067
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Lydia Maria Inglezou, Theocharis Konstantinidis, Aikaterini Skeva, Bouse Malkots, Emmanouil Panagiotopoulos, Vasiliki Sakka, Emmanouil Spanoudakis, Maria Panopoulou, Ioannis Kotsianidis, Konstantinos Liapis. The Role of Gut Microbiota in Acute Myeloid LeukemiaJournal of Clinical Medicine 2026; 15(10) doi: 10.3390/jcm15103571
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Natalia Diaz-Garrido, Josefa Badia, Laura Baldomà. Modulation of Dendritic Cells by Microbiota Extracellular Vesicles Influences the Cytokine Profile and Exosome CargoNutrients 2022; 14(2) doi: 10.3390/nu14020344
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Florent Malard, Anne Vekhoff, Simona Lapusan, Francoise Isnard, Evelyne D’incan-Corda, Jérôme Rey, Colombe Saillard, Xavier Thomas, Sophie Ducastelle-Lepretre, Etienne Paubelle, Marie-Virginie Larcher, Clément Rocher, Christian Recher, Suzanne Tavitian, Sarah Bertoli, Anne-Sophie Michallet, Lila Gilis, Pierre Peterlin, Patrice Chevallier, Stéphanie Nguyen, Emilie Plantamura, Lilia Boucinha, Cyrielle Gasc, Mauricette Michallet, Joel Dore, Ollivier Legrand, Mohamad Mohty. Gut microbiota diversity after autologous fecal microbiota transfer in acute myeloid leukemia patientsNature Communications 2021; 12(1) doi: 10.1038/s41467-021-23376-6
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Yuanfeng Liu, Xiang Li, Yudie Yang, Ye Liu, Shijun Wang, Boyang Ji, Yongjun Wei. Exploring Gut Microbiota in Patients with Colorectal Disease Based on 16S rRNA Gene Amplicon and Shallow Metagenomic SequencingFrontiers in Molecular Biosciences 2021; 8 doi: 10.3389/fmolb.2021.703638
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Ellie Chen, Anisha Kalavar, Ngoc-Anh Bui-Thanh, Antone R. Opekun, Donna L. White, Daniel Rosen, David Y. Graham, Rolando E. Rumbaut, Hashem B. El-Serag, Li Jiao. Serum Levels of Lipopolysaccharides and Risk of Advanced Colorectal AdenomaExploratory Research and Hypothesis in Medicine 2020; 0(000) doi: 10.14218/ERHM.2020.00001
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Muhammad I. Getso, Subha Sundaramoorthy, H. D. Kanishka, Mansur Aliyu, Ibrahim Yusuf, O. Azeez-Akande, Isah M. Daneji, Alhassan A. Sharif. DISTRIBUTION AND ANTIBIOTICS SUSCEPTIBILITY PATTERNS OF ENTEROCOCCUS SPP. FROM A SELECTED HOSPITAL IN INDIAFUDMA JOURNAL OF SCIENCES 2020; 4(3) doi: 10.33003/fjs-2020-0403-343
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Constantin Munteanu, Gelu Onose, Mariana Rotariu, Mădălina Poștaru, Marius Turnea, Anca Irina Galaction. Role of Microbiota-Derived Hydrogen Sulfide (H2S) in Modulating the Gut–Brain Axis: Implications for Alzheimer’s and Parkinson’s Disease PathogenesisBiomedicines 2024; 12(12) doi: 10.3390/biomedicines12122670
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Mei‐Yin Lai, Yin‐Hsi Chang, Chien‐Chung Lee. The impact of gut microbiota on morbidities in preterm infantsThe Kaohsiung Journal of Medical Sciences 2024; 40(9) doi: 10.1002/kjm2.12878
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Jiaxin Huo, Xiaowei Li, Kaiyang Zhang, Hao Fu, Xiucai Hu, Aijun Lv. Alteration of Immune Function and Gut Microbiome Composition in Carassius auratus Challenged With Rahnella aquatilisJournal of Fish Diseases 2025; 48(3) doi: 10.1111/jfd.14054
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Martin Floch. Colorectal Neoplasia and the Colorectal Microbiome2020;  doi: 10.1016/B978-0-12-819672-4.00001-5
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Qian Ouyang, Yajuan Xu, Yanjie Ban, Jingjing Li, Yanjun Cai, Bo Wu, Yingqi Hao, Zongzong Sun, Miao Zhang, Mengqi Wang, Wentao Wang, Yinkai Zhao. Probiotics and Prebiotics in Subclinical Hypothyroidism of Pregnancy with Small Intestinal Bacterial OvergrowthProbiotics and Antimicrobial Proteins 2024; 16(2) doi: 10.1007/s12602-023-10068-4
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Kelley Newlin Lew, Angela Starkweather, Xiaomei Cong, Michelle Judge. A Mechanistic Model of Gut–Brain Axis Perturbation and High-Fat Diet Pathways to Gut Microbiome Homeostatic Disruption, Systemic Inflammation, and Type 2 DiabetesBiological Research For Nursing 2019; 21(4) doi: 10.1177/1099800419849109
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Judy Triplett, David Ellis, Amber Braddock, Erin Roberts, Katherine Ingram, Eric Perez, Amanda Short, Dominique Brown, Victoria Hutzley, Chelsey Webb, Armando Soto, Victor Chan. Temporal and region-specific effects of sleep fragmentation on gut microbiota and intestinal morphology in Sprague Dawley ratsGut Microbes 2020; 11(4) doi: 10.1080/19490976.2019.1701352
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Kyung-Eon Lee, Jeon-Kyung Kim, Sang-Kap Han, Dong Yun Lee, Hae-Ji Lee, Sung-Vin Yim, Dong-Hyun Kim. The extracellular vesicle of gut microbial Paenalcaligenes hominis is a risk factor for vagus nerve-mediated cognitive impairmentMicrobiome 2020; 8(1) doi: 10.1186/s40168-020-00881-2
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Natalia Diaz-Garrido, María-José Fábrega, Rodrigo Vera, Rosa Giménez, Josefa Badia, Laura Baldomà. Membrane vesicles from the probiotic Nissle 1917 and gut resident Escherichia coli strains distinctly modulate human dendritic cells and subsequent T cell responsesJournal of Functional Foods 2019; 61 doi: 10.1016/j.jff.2019.103495
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Lu Ding, Xin-Hua Xiao. Gut microbiota: closely tied to the regulation of circadian clock in the development of type 2 diabetes mellitusChinese Medical Journal 2020; 133(7) doi: 10.1097/CM9.0000000000000702
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Yuanyuan Dai, Mengyue Wang, Dexia Zhong, Xiaowei Xu. Bacillus subtilis plays a role in the inhibition of transporter ABCB1 in Caco-2 cellsEpilepsy Research 2022; 183 doi: 10.1016/j.eplepsyres.2022.106925
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Lala Stepanyan, Monika Israyelyan, Alessandro Gori, Avetis Tsaturyan, Zhaklina Saribekyan, Kristina Hovsepyan, Tatevik Sargsyan, Raffaele Pastore, Antonio De Luca, Giovanni N. Roviello. Natural and Synthetic Peptides as Alternatives to Antibiotics in Intestinal Infections—A ReviewAntibiotics 2026; 15(1) doi: 10.3390/antibiotics15010068
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Alice Njolke Mafe, Great Iruoghene Edo, Osamah S. Majeed, Tayser Sumer Gaaz, Patrick Othuke Akpoghelie, Endurance Fegor Isoje, Ufuoma Augustina Igbuku, Joseph Oghenewogaga Owheruo, Rapheal Ajiri Opiti, Yasal Garba, Arthur Efeoghene Athan Essaghah, Dina S. Ahmed, Huzaifa Umar. A review on probiotics and dietary bioactives: Insights on metabolic well-being, gut microbiota, and inflammatory responsesFood Chemistry Advances 2025; 6 doi: 10.1016/j.focha.2025.100919
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A. C. Maloupazoa Siawaya, E. Kuissi Kamgaing, S. Minto’o Rogombe, T. Obiang, E. Moungoyi Massala, M. J. V. Magossou Mbadinga, M. Leboueny, O. Mvoundza Ndjindji, A. Mveang-Nzoghe, J. P. Ondo, A. Mintsa Ndong, P. N Essone, S. T. Agnandji, M. Kaba, S. Ategbo, J. F. Djoba Siawaya. HIV-exposed uninfected compared with unexposed infants show the presence of leucocytes, lower lactoferrin levels and antimicrobial-resistant micro-organisms in the stoolPaediatrics and International Child Health 2019; 39(4) doi: 10.1080/20469047.2019.1577063
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Loris R. Lopetuso, Marco Napoli, Gianenrico Rizzatti, Antonio Gasbarrini. The intriguing role of Rifaximin in gut barrier chronic inflammation and in the treatment of Crohn’s diseaseExpert Opinion on Investigational Drugs 2018; 27(6) doi: 10.1080/13543784.2018.1483333
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Alyssa Mitson-Salazar, Ruslan Medzhitov. Environmental sensing mechanisms in intestinal homeostasisJournal of Allergy and Clinical Immunology 2022; 150(3) doi: 10.1016/j.jaci.2022.06.019
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Antonietta Gerarda Gravina, Raffaele Pellegrino, Salvatore Auletta, Giovanna Palladino, Giovanni Brandimarte, Rossella D’Onofrio, Giusi Arboretto, Giuseppe Imperio, Andrea Ventura, Marina Cipullo, Marco Romano, Alessandro Federico. <i>Hericium erinaceus</i>, a medicinal fungus with a centuries-old history: Evidence in gastrointestinal diseasesWorld Journal of Gastroenterology 2023; 29(20): 3048-3065 doi: 10.3748/wjg.v29.i20.3048
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Beatriz Arce-López, Guadalupe X. Bazan, Susana Molina, Maria Carmen Crespo, María García-Beccaria, Silvia Cruz-Gil, Cristina M. Fernández-Díaz, Ana Ramírez de Molina, Ricardo Ramos-Ruiz, Maria Isabel Espinosa-Salinas. Effect of fiber-modified kombucha tea on gut microbiota in healthy population: A randomized controlled trial (RCT)Current Research in Food Science 2025; 11 doi: 10.1016/j.crfs.2025.101130
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Payal G. Patel, Ajay C. Patel, Prasenjit Chakraborty, Haren B. Gosai. Probiotics, Prebiotics, Synbiotics, and Postbiotics2023;  doi: 10.1007/978-981-99-1463-0_1
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Marina Nicolaou, Meropi Toumba, Alexandros Kythreotis, Habib Daher, Nicos Skordis. Obesogens in Adolescence: Challenging Aspects and Prevention StrategiesChildren 2024; 11(5) doi: 10.3390/children11050602
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Donjete Statovci, Mònica Aguilera, John MacSharry, Silvia Melgar. The Impact of Western Diet and Nutrients on the Microbiota and Immune Response at Mucosal InterfacesFrontiers in Immunology 2017; 8 doi: 10.3389/fimmu.2017.00838
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Cecilie Dahl, Maggie Stanislawski, Nina Iszatt, Siddhartha Mandal, Catherine Lozupone, Jose C. Clemente, Rob Knight, Hein Stigum, Merete Eggesbø, Zaid Abdo. Gut microbiome of mothers delivering prematurely shows reduced diversity and lower relative abundance of Bifidobacterium and StreptococcusPLOS ONE 2017; 12(10) doi: 10.1371/journal.pone.0184336
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K. A. Martirosian, E. A. Lyalyukova, I. V. Prikhoda. The role of microbiota in the development of colorectal cancerExperimental and Clinical Gastroenterology 2022; (9) doi: 10.31146/1682-8658-ecg-205-9-209-215
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Junxi Shen, Leyao Fang, Yi Wu, Na Deng, Xinxin Peng, Dandan Li, Zhoujin Tan. Intestinal Microbiota Dysbiosis Disrupts the Mucosal Barrier, Triggering Inflammatory Responses in Gut-Kidney Interaction and Exacerbating DiarrheaJournal of Inflammation Research 2025;  doi: 10.2147/JIR.S529493
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Xiaohua Guo, Edozie Samuel Okpara, Wanting Hu, Chuyun Yan, Yu Wang, Qionglin Liang, John Y. L. Chiang, Shuxin Han. Interactive Relationships between Intestinal Flora and Bile AcidsInternational Journal of Molecular Sciences 2022; 23(15) doi: 10.3390/ijms23158343
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Zhibin Liu, Wouter J. C. de Bruijn, Marieke E. Bruins, Jean-Paul Vincken. Microbial Metabolism of Theaflavin-3,3′-digallate and Its Gut Microbiota Composition Modulatory EffectsJournal of Agricultural and Food Chemistry 2021; 69(1) doi: 10.1021/acs.jafc.0c06622
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Gholamreza Abdi, Abu Saeid, Ab Waheed Wani, Vishal Johar. The Gut Microbiota in Health and Disease2023;  doi: 10.1002/9781119904786.ch4
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Amanda Sanders, Hannah Rackers, Mary Kimmel. A role for the microbiome in mother–infant interaction and perinatal depressionInternational Review of Psychiatry 2019; 31(3) doi: 10.1080/09540261.2018.1548431
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Haroon Ali, Bingqing Xie, Jun Yang, Urooba Nadeem. Microbial Influence on Immune Checkpoint Inhibitor Therapy in Non-Small Cell Carcinoma: The Gut–Lung-Immune AxisCancers 2026; 18(12) doi: 10.3390/cancers18121948
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Meng-Ju Lin, Tung-Hung Su, Chieh-Chang Chen, Wei-Kai Wu, Shih-Jer Hsu, Tai-Chung Tseng, Sih-Han Liao, Chun-Ming Hong, Hung-Chih Yang, Chun-Jen Liu, Ming-Shiang Wu, Jia-Horng Kao. Diversity and composition of gut microbiota in healthy individuals and patients at different stages of hepatitis B virus-related liver diseaseGut Pathogens 2023; 15(1) doi: 10.1186/s13099-023-00549-w
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Huimin Xu, Yingzhe Luo, Qiaoqi Li, Hong Zhu. Acupuncture influences multiple diseases by regulating gut microbiotaFrontiers in Cellular and Infection Microbiology 2024; 14 doi: 10.3389/fcimb.2024.1371543
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芸峰 赵. Study on the Mechanism of <i>Coptis</i><i> chinensis</i> in Improving Insulin ResistanceAdvances in Clinical Medicine 2024; 14(11) doi: 10.12677/acm.2024.14112985
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Aris Kaltsas, Ilias Giannakodimos, Eleftheria Markou, Marios Stavropoulos, Dimitrios Deligiannis, Zisis Kratiras, Michael Chrisofos. The Androbactome and the Gut Microbiota–Testis Axis: A Narrative Review of Emerging Insights into Male FertilityInternational Journal of Molecular Sciences 2025; 26(13) doi: 10.3390/ijms26136211
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Nastaran Karimi, Angélica Baca De Anda, Rachel Yang, Emre Aksan, Maria T. Grimaldo, Seyed Javad Moghaddam. International Review of Cell and Molecular Biology 2025;  doi: 10.1016/bs.ircmb.2024.12.011
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Bianca Bana, Filipe Cabreiro. The Microbiome and AgingAnnual Review of Genetics 2019; 53(1) doi: 10.1146/annurev-genet-112618-043650
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Adeeba H. Dhalech, Tara D. Fuller, Christopher M. Robinson, Susana López. Specific Bacterial Cell Wall Components Influence the Stability of Coxsackievirus B3Journal of Virology 2021; 95(22) doi: 10.1128/JVI.01424-21
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Massimo Marzorati, Pieter Van den Abbeele, Sarah S. Bubeck, Thomas Bayne, Kiran Krishnan, Aicacia Young, Dilip Mehta, Anselm DeSouza. Bacillus subtilis HU58 and Bacillus coagulans SC208 Probiotics Reduced the Effects of Antibiotic-Induced Gut Microbiome Dysbiosis in an M-SHIME® ModelMicroorganisms 2020; 8(7) doi: 10.3390/microorganisms8071028
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Alfredo Ornelas, Alexander S. Dowdell, J. Scott Lee, Sean P. Colgan. Microbial Metabolite Regulation of Epithelial Cell-Cell Interactions and Barrier FunctionCells 2022; 11(6) doi: 10.3390/cells11060944
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Meysam Sarshar, Daniela Scribano, Massimiliano Marazzato, Cecilia Ambrosi, Maria Rita Aprea, Marta Aleandri, Annamaria Pronio, Catia Longhi, Mauro Nicoletti, Carlo Zagaglia, Anna Teresa Palamara, Maria Pia Conte. Genetic diversity, phylogroup distribution and virulence gene profile of pks positive Escherichia coli colonizing human intestinal polypsMicrobial Pathogenesis 2017; 112 doi: 10.1016/j.micpath.2017.10.009
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Yanyan Zheng, Huajie Liu, Xianzhi Liu, Weiling He. The therapeutic landscape and underlying mechanisms of taurine in colorectal cancerCancer Letters 2026; 649 doi: 10.1016/j.canlet.2026.218480
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Fernanda G. Rodrigues, Milene S. Ormanji, Ita P. Heilberg, Stephan J. L. Bakker, Martin H. de Borst. Interplay between gut microbiota, bone health and vascular calcification in chronic kidney diseaseEuropean Journal of Clinical Investigation 2021; 51(9) doi: 10.1111/eci.13588
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C. A. González-Bermúdez, R. López-Nicolás, P. Peso-Echarri, C. Frontela-Saseta, C. Martínez-Graciá. Effects of different thickening agents on infant gut microbiotaFood & Function 2018; 9(3) doi: 10.1039/C7FO01992K
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Jesse Ouwehand, Willie J.G.M. Peijnenburg, Martina G. Vijver. Microbial function matters: Microbiome-aware nano-ecotoxicology needs functional endpoints besides compositional dataChemosphere 2024; 369 doi: 10.1016/j.chemosphere.2024.143905
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Ningning Li, Chunmei Bai, Lin Zhao, Yuping Ge, Xiaoyuan Li. Characterization of the fecal microbiota in gastrointestinal cancer patients and healthy peopleClinical and Translational Oncology 2022; 24(6) doi: 10.1007/s12094-021-02754-y
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Junxia Du, Xiaolin Zhao, Xiaonan Ding, Qiuxia Han, Yingjie Duan, Qinqin Ren, Haoran Wang, Chenwen Song, Xiaochen Wang, Dong Zhang, Hanyu Zhu. The Role of the Gut Microbiota in Complications among Hemodialysis PatientsMicroorganisms 2024; 12(9) doi: 10.3390/microorganisms12091878
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Ping Xu, Yuxuan Hong, Pinpin Chen, Xu Wang, Shijie Li, Jie Wang, Fancong Meng, Zutao Zhou, Deshi Shi, Zili Li, Shengbo Cao, Yuncai Xiao. Regulation of the cecal microbiota community and the fatty liver deposition by the addition of brewers’ spent grain to feed of Landes geeseFrontiers in Microbiology 2022; 13 doi: 10.3389/fmicb.2022.970563
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Ji-Won Park, Sung-Eun Kim, Na Young Lee, Jung-Hee Kim, Jang-Han Jung, Myoung-Kuk Jang, Sang-Hoon Park, Myung-Seok Lee, Dong-Joon Kim, Hyoung-Su Kim, Ki Tae Suk. Role of Microbiota-Derived Metabolites in Alcoholic and Non-Alcoholic Fatty Liver DiseasesInternational Journal of Molecular Sciences 2021; 23(1) doi: 10.3390/ijms23010426
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Zheng‐Wei Chen, Wei‐Kai Wu, Jiun‐Yang Chiang, Nai‐Chen Cheng, Jen‐Kuang Lee, Ming‐Shiang Wu. Microbiota γ‐Butyrobetaine Is Associated With Increased Risk of Major Adverse Limb Events in People With Lower Extremity Arterial Disease Undergoing Endovascular TherapyJournal of the American Heart Association 2025; 14(16) doi: 10.1161/JAHA.124.037356
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Ying Shi, Benqiang Li, Jinghua Cheng, Jie Tao, Pan Tang, Jiajie Jiao, Huili Liu. Microbial Community and Metabolome Analysis of the Porcine Intestinal Damage Model Induced by the IPEC-J2 Cell Culture-Adapted Porcine Deltacoronavirus (PDCoV) InfectionMicroorganisms 2024; 12(5) doi: 10.3390/microorganisms12050874
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Jesus Álvarez-Herms, Martin Burtscher, Adriana González-Benito, Francisco Corbi, Adrian Odriozola-Martínez. The Gut Microbiota Characterization of a World-Class Mountain Trail Runner During a Complete Competition Season: A Case ReportJournal of Athletic Training 2025; 60(3) doi: 10.4085/1062-6050-0143.24
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Robab Sarmadi, Hajie Lotfi, Mohammad Amin Hejazi, Fariba Ghiasi, Rana Keyhanmanesh. The role of probiotics on microvascular complications of type-2 diabetes: Nephropathy and retinopathyJournal of Cardiovascular and Thoracic Research 2024; 16(2) doi: 10.34172/jcvtr.32877
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Valeria D. Felice, Siobhain M. O'Mahony. The microbiome and disorders of the central nervous systemPharmacology Biochemistry and Behavior 2017; 160 doi: 10.1016/j.pbb.2017.06.016
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Xinyu Tong, Riyu Zhang, Yuanxing Zhang, Qin Liu, Sang Ho Choi, Qiyao Wang, Shuai Shao. Evaluation of a live attenuated vaccine against Edwardsiella piscicida by 16S rRNA sequencingAquaculture 2024; 582 doi: 10.1016/j.aquaculture.2024.740557
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Agata Ziomber-Lisiak, Katarzyna Talaga-Ćwiertnia, Agnieszka Sroka-Oleksiak, Artur D. Surówka, Kajetan Juszczak, Magdalena Szczerbowska-Boruchowska. Repetitive transcranial direct current stimulation modulates the brain–gut–microbiome axis in obese rodentsPharmacological Reports 2022; 74(5) doi: 10.1007/s43440-022-00401-z
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Julia R. Berian, Neil Hyman. The evolution of bowel preparation for gastrointestinal surgerySeminars in Colon and Rectal Surgery 2018; 29(1) doi: 10.1053/j.scrs.2017.09.002
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Kirsten Berding, Caitriona M. Long-Smith, Carina Carbia, Thomaz F. S. Bastiaanssen, Marcel van de Wouw, Niamh Wiley, Conall R. Strain, Fiona Fouhy, Catherine Stanton, John F. Cryan, Timothy G. Dinan. A specific dietary fibre supplementation improves cognitive performance—an exploratory randomised, placebo-controlled, crossover studyPsychopharmacology 2021; 238(1) doi: 10.1007/s00213-020-05665-y
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Siqi Fan, Huangyao Zhu, Wanqiu Liu, Jingwen Ha, Ying Liu, Ma Mi, Qingjia Ren, Lijun Xu, Jie Zhang, Wenyuan Liu, Feng Feng, Jian Xu. Comparing massa medicata fermentata before and after charred in terms of digestive promoting effect via metabolomics and microbiome analysisJournal of Ethnopharmacology 2024; 327 doi: 10.1016/j.jep.2024.117989
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Lungile N. Thwala, Manuel J. Santander-Ortega, M. Victoria Lozano, Noemi S. Csaba. Biomedical Applications of Functionalized Nanomaterials2018;  doi: 10.1016/B978-0-323-50878-0.00015-X
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Carmen De Caro, Luigi Francesco Iannone, Rita Citraro, Pasquale Striano, Giovambattista De Sarro, Andrew Constanti, John F. Cryan, Emilio Russo. Can we ‘seize’ the gut microbiota to treat epilepsy?Neuroscience & Biobehavioral Reviews 2019; 107 doi: 10.1016/j.neubiorev.2019.10.002
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Maria Tsikala-Vafea, Neel Belani, Kendra Vieira, Hina Khan, Dimitrios Farmakiotis. Use of antibiotics is associated with worse clinical outcomes in patients with cancer treated with immune checkpoint inhibitors: A systematic review and meta-analysisInternational Journal of Infectious Diseases 2021; 106 doi: 10.1016/j.ijid.2021.03.063
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Shekoufeh Salamat, Alireza Jahan-Mihan, Mohammad Reza Tabandeh, Anahita Mansoori. Randomized clinical trial evaluating the efficacy of synbiotic supplementation on serum endotoxin and trimethylamine N-oxide levels in patients with dyslipidaemiaArchives of Medical Science – Atherosclerotic Diseases 2024; 9(1) doi: 10.5114/amsad/178106
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Chyn Boon Wong, Noriyuki Iwabuchi, Jin-zhong Xiao. Exploring the Science behind Bifidobacterium breve M-16V in Infant HealthNutrients 2019; 11(8) doi: 10.3390/nu11081724
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Min Kyaw Htet, Mifa Nurfadilah, Anouschka S. Ramsteijn, Tiffany C. Angelin, Amanda S. Ameline, Benjamin Momo Kadia, Isobel L. Gabain, Hilary Davies-Kershaw, Beatriz Calvo-Urbano, Joanne P. Webster, Elaine L. Ferguson, Stephen Allen, Alan W. Walker, Umi Fahmida. Exploring the diet–microbiome–growth axis among under-2-year-old children: a case–control study in East Lombok, IndonesiaPhilosophical Transactions B 2026; 381(1950) doi: 10.1098/rstb.2025.0045
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Elizabeth Carvajal-Millan, Francisco Vargas-Albores, José Miguel Fierro-Islas, Teresa Gollas-Galván, Dante Magdaleno-Moncayo, Agustín Rascon-Chu, Marcel Martínez-Porchas, Asunción Lago-Lestón. Arabinoxylans and gelled arabinoxylans used as anti-obesogenic agents could protect the stability of intestinal microbiota of rats consuming high-fat dietsInternational Journal of Food Sciences and Nutrition 2020; 71(1) doi: 10.1080/09637486.2019.1610729
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Mahima Chowdhury, Neil Raj Chaudhary, Paranjeet Kaur, Anju Goyal, Sanjeev Kumar Sahu. Different Strategies Targeting Gut Microbiota for the Management of Several Disorders: A Sustainable ApproachInfectious Disorders - Drug Targets 2024; 24(5) doi: 10.2174/0118715265267536231121095634
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Rejuan Islam, Tilak Saha. Recent Trends and The Future of Antimicrobial Agents - Part 22023;  doi: 10.2174/9789815123975123010004
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Qian Jiang, Wei Shen, Xin Liu, Jie Chen, Ying Chen, Chengyi Liu, Ruolin Hou. Circulating cytokines mediate the risk of COPD: A mediation analysis based on 473 gut microbiota and 91 circulating cytokinesMedicine 2026; 105(12) doi: 10.1097/MD.0000000000048149
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Tzu-Hsiang Weng, Kai-Yao Huang, Jhih-Hua Jhong, Hui-Ju Kao, Chia-Hung Chen, Yu-Chi Chen, Shun-Long Weng. Microbiome analysis of maternal and neonatal microbial communities associated with the different delivery modes based on 16S rRNA gene amplicon sequencingTaiwanese Journal of Obstetrics and Gynecology 2023; 62(5) doi: 10.1016/j.tjog.2023.07.033
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Susan L. Prescott, Rachel A. Millstein, Martin A. Katzman, Alan C. Logan. Biodiversity, the Human Microbiome and Mental Health: Moving toward a New Clinical Ecology for the 21st Century?International Journal of Biodiversity 2016; 2016 doi: 10.1155/2016/2718275
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Mingyue Lv, Yannan Zheng, Man Yuan, Errui Zhang, Min Zheng, Guangyao Liu, Min Zheng, Weiliang Gu, Hongxi Xu. Cassiae semen extract ameliorates hyperlipidemia in rats by modulating lipid metabolism and FcγR-mediated immune regulationFrontiers in Pharmacology 2025; 16 doi: 10.3389/fphar.2025.1546119
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Rainer Klement, Valerio Pazienza. Impact of Different Types of Diet on Gut Microbiota Profiles and Cancer Prevention and TreatmentMedicina 2019; 55(4) doi: 10.3390/medicina55040084
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Giulia Ronchi, Davide Pellegrino, Marwa El Soury, Olga Amato, Francesco Gaia, Sajjad Farzin, Raffaele Nuzzi, Marijana Basic, Silvia Bolsega, Stefano Geuna, Matilde Cescon, Kirsten Haastert-Talini, Giovanna Gambarotta. Gut microbiota regulates optic nerve fiber myelinationFrontiers in Cell and Developmental Biology 2025; 13 doi: 10.3389/fcell.2025.1526855
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S. S. Amadei, V. Notario. Developmental Biology in Prokaryotes and Lower Eukaryotes2021;  doi: 10.1007/978-3-030-77595-7_20
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Yu Feng, Danyan Xu. Short-chain fatty acids are potential goalkeepers of atherosclerosisFrontiers in Pharmacology 2023; 14 doi: 10.3389/fphar.2023.1271001
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Naveen Jeyaraman, Madhan Jeyaraman, Priya Dhanpal, Swaminathan Ramasubramanian, Arulkumar Nallakumarasamy, Sathish Muthu, Gabriel Silva Santos, Lucas Furtado da Fonseca, José Fábio Lana. Integrative review of the gut microbiome’s role in pain management for orthopaedic conditionsWorld Journal of Experimental Medicine 2025; 15(2): 102969 doi: 10.5493/wjem.v15.i2.102969
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Zuodong Qin, Siqi Wang, Dezhi Guo, Jialiang Zhu, Huahai Chen, Le Bai, Xiaofang Luo, Yeshi Yin. Comparative analysis of intestinal bacteria among venom secretion and non-secrection snakesScientific Reports 2019; 9(1) doi: 10.1038/s41598-019-42787-6
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Charlotte L. Kvasnovsky, Lex E.X. Leong, Jocelyn M. Choo, Guy C.J. Abell, Savvas Papagrigoriadis, Kenneth D. Bruce, Geraint B. Rogers. Clinical and symptom scores are significantly correlated with fecal microbiota features in patients with symptomatic uncomplicated diverticular disease: a pilot studyEuropean Journal of Gastroenterology & Hepatology 2018; 30(1) doi: 10.1097/MEG.0000000000000995
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Rithi A T, Antara Banerjee, Abhijit Mitra, Keerthi Nethaji, Divya Ilanchoorian, Arun Kumar Radhakrishnan. A concise review of the impact of groundwater pollution in coastal regions on human gut microbiome composition and its effect on human healthGroundwater for Sustainable Development 2024; 26 doi: 10.1016/j.gsd.2024.101187
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A.T. Ishikawa, J.S. Weese, A.P.F.R.L. Bracarense, A.A. Alfieri, G.G. Oliveira, O. Kawamura, E.Y. Hirooka, E.N. Itano, M.C. Costa. Single aflatoxin B1 exposure induces changes in gut microbiota community in C57Bl/6 miceWorld Mycotoxin Journal 2017; 10(3) doi: 10.3920/WMJ2017.2190
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Rama Sai P, Chaya Prasad. Bird’s Eye View of Gut Microbiota: Role In Health And DiseaseJournal of the Osteopathic Family Physicians of California 2024; 3(Fall 2024) doi: 10.58858/030102
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Léonie Láng, Simon McArthur, Alpar S. Lazar, Line Pourtau, David Gaudout, Matthew G. Pontifex, Michael Müller, David Vauzour. Dietary (Poly)phenols and the Gut–Brain Axis in AgeingNutrients 2024; 16(10) doi: 10.3390/nu16101500
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Brynn A. Hollingsworth, David R. Cassatt, Andrea L. DiCarlo, Carmen I. Rios, Merriline M. Satyamitra, Thomas A. Winters, Lanyn P. Taliaferro. Acute Radiation Syndrome and the Microbiome: Impact and ReviewFrontiers in Pharmacology 2021; 12 doi: 10.3389/fphar.2021.643283
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Chenchen Meng, Xiaoming Wang, Lu Fan, Yajie Fan, Zhipeng Yan, Yunjiao Wang, Yanyang Li, Junping Zhang, Shichao Lv. A new perspective in the prevention and treatment of antitumor therapy-related cardiotoxicity: Intestinal microecologyBiomedicine & Pharmacotherapy 2024; 170 doi: 10.1016/j.biopha.2023.115588
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Yang-Kai-Xin Yang, Shu-Jun Ge, Qi-Ling Su, Jin-Jun Chen, Jiang Wu, Kai Kang. Effects of Polyvinyl Chloride Microplastics on the Reproductive System, Intestinal Structure, and Microflora in Male and Female MiceVeterinary Sciences 2024; 11(10) doi: 10.3390/vetsci11100488
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Luisana Di Cristo, Stefania Sabella. Cancer Cell CultureMethods in Molecular Biology 2023; 2645 doi: 10.1007/978-1-0716-3056-3_2
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Jitendra Kumar, Kavita Rani, Chander Datt. Molecular link between dietary fibre, gut microbiota and healthMolecular Biology Reports 2020; 47(8) doi: 10.1007/s11033-020-05611-3
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Lujia Liu, Yang Liu, Xiao Guo, Xiangren Jin, Wei Yan, Baiqiang Lin, Ting Cai, Yunwei Wei. Activation of p38 mitogen‐activated protein kinase pathway by lipopolysaccharide aggravates postoperative ileus in colorectal cancer patientsJournal of Gastroenterology and Hepatology 2022; 37(3) doi: 10.1111/jgh.15760
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Xueyao Xi, Yanan Gao, Jiaqi Wang, Nan Zheng. Strontium chloride improves bone mass by affecting the gut microbiota in young male ratsFrontiers in Endocrinology 2023; 14 doi: 10.3389/fendo.2023.1198475
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Chengcong Yang, Chuantao Peng, Hao Jin, Lijun You, Jiao Wang, Haiyan Xu, Zhihong Sun. Comparison of the composition and function of the gut microbiome in herdsmen from two pasture regions, Hongyuan and XilingolFood Science & Nutrition 2021; 9(6) doi: 10.1002/fsn3.2290
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Functional Foods and Gut Microbiome2025;  doi: 10.1515/9783112205150-007
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Anu Ruusunen, Tetyana Rocks, Felice Jacka, Amy Loughman. The gut microbiome in anorexia nervosa: relevance for nutritional rehabilitationPsychopharmacology 2019; 236(5) doi: 10.1007/s00213-018-5159-2
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Antoine Boustany, Paul Feuerstadt, Glenn Tillotson. The 3 Ds: Depression, Dysbiosis, and Clostridiodes difficileAdvances in Therapy 2024; 41(11) doi: 10.1007/s12325-024-02972-0
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Aneta Agnieszka Dyczkowska, Agnieszka Chabowska-Kita. Caenorhabditis elegans as a model organism in obesity researchBioTechnologia 2021; 102(3) doi: 10.5114/bta.2021.109094
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Rajesh Man Rajbhandari, Giovanni Forcina, Prajwol Manandhar, Pragun G. Rajbhandari, Rajindra Napit, Roji Raut, Seily Shrestha, Amir Sadaula, Christian Gortázar, Paulo Célio Alves, José de la Fuente, João Queirós, Dibesh Karmacharya. Gut microbiota diversity among humans, elephants, livestock and wild herbivores in Chitwan National Park bears implications for conservation medicineScientific Reports 2025; 15(1) doi: 10.1038/s41598-025-89402-5
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Eden Laing, Leonardo Boldt, Suwannee Ganguillet, Emma Slack, Lisa Maier, Nicolas Beziere. 8-azido-3,8-dideoxy-D-manno-octulosonic acid-mediated metabolic oligosaccharide engineering for specific labeling of diverse EnterobacteralesiScience 2026; 29(4) doi: 10.1016/j.isci.2026.115255
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Longlong Wang, Yong Zhou, Heyang Cui, Xuehan Zhuang, Chen Cheng, Yongjia Weng, Huijuan Liu, Shubin Wang, Xinghua Pan, Yongping Cui, Weimin Zhang. IGH repertoire analysis at scale: deciphering the complexity of B cell infiltration and migration in esophageal squamous cell carcinomaCancer Gene Therapy 2024; 31(1) doi: 10.1038/s41417-023-00689-w
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Weronika Sokólska, Monika Gudowska-Sawczuk, Karolina Orywal. Cytokines and Chemokines as Emerging Biomarkers and Therapeutic Targets in Colorectal Cancer—Narrative ReviewInternational Journal of Molecular Sciences 2026; 27(4) doi: 10.3390/ijms27041996
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Dan Gan, Jialun Chen, Xin Tang, Luyao Xiao, Christopher J. Martoni, Gregory Leyer, Guixia Huang, Wei Li. Impact of a probiotic chewable tablet on stool habits and microbial profile in children with functional constipation: A randomized controlled clinical trialFrontiers in Microbiology 2022; 13 doi: 10.3389/fmicb.2022.985308
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Abhiram Kumar, Kalyani Sakhare, Dwaipayan Bhattacharya, Raktim Chattopadhyay, Purvish Parikh, Kumar P. Narayan, Anubhab Mukherjee. Communication in non-communicable diseases (NCDs) and role of immunomodulatory nutraceuticals in their managementFrontiers in Nutrition 2022; 9 doi: 10.3389/fnut.2022.966152
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Yuji Ogawa, Yasushi Honda, Takaomi Kessoku, Wataru Tomeno, Kento Imajo, Masato Yoneda, Satoru Saito, Atsushi Nakajima. Alcoholic/Non-Alcoholic Digestive Diseases2019;  doi: 10.1007/978-981-13-1465-0_9
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Carolina Ferreira, Sofia D. Viana, Flávio Reis. Is Gut Microbiota Dysbiosis a Predictor of Increased Susceptibility to Poor Outcome of COVID-19 Patients? An UpdateMicroorganisms 2020; 9(1) doi: 10.3390/microorganisms9010053
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Lishi Jie, Zhenyuan Ma, Yifan Gao, Xiaoqing Shi, Likai Yu, Jun Mao, Peimin Wang. The mechanism of palmatine-mediated intestinal flora and host metabolism intervention in OA-OP comorbidity ratsFrontiers in Medicine 2023; 10 doi: 10.3389/fmed.2023.1153360
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Trisha Jenkins, Jason Nguyen, Kate Polglaze, Paul Bertrand. Influence of Tryptophan and Serotonin on Mood and Cognition with a Possible Role of the Gut-Brain AxisNutrients 2016; 8(1) doi: 10.3390/nu8010056
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Jianli Xu, Lei Wang, Xi Chen, Weidong Le. New Understanding on the Pathophysiology and Treatment of Constipation in Parkinson’s DiseaseFrontiers in Aging Neuroscience 2022; 14 doi: 10.3389/fnagi.2022.917499
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Richa Chibbar, Levinus A. Dieleman. The Gut Microbiota in Celiac Disease and probioticsNutrients 2019; 11(10) doi: 10.3390/nu11102375
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C. Antza, S. Stabouli, V. Kotsis. Gut microbiota in kidney disease and hypertensionPharmacological Research 2018; 130 doi: 10.1016/j.phrs.2018.02.028
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Hye-Won Cho, Ki-Jong Rhee, Yong-Bin Eom. Zerumbone Restores Gut Microbiota Composition in ETBF Colonized AOM/DSS MiceJournal of Microbiology and Biotechnology 2020; 30(11) doi: 10.4014/jmb.2006.06034
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Florine Ecale, Abdelaziz El Houari, Stéphanie Crapart, Jérome Laparre, Manilduth Ramnath, Jean-Marc Berjeaud, Marie-Hélène Rodier, Alexandre Crépin. In vitro sensitivity of 30 anaerobic bacterial strains of the human intestinal core microbiota to antibiotics: Culture and LC-MS/MS approachesAnaerobe 2021; 67 doi: 10.1016/j.anaerobe.2020.102314
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Masashi Mukohda, Takanori Yano, Toshiyasu Matsui, Sho Nakamura, Jiro Miyamae, Kensuke Toyama, Ryoji Mitsui, Risuke Mizuno, Hiroshi Ozaki. Treatment with Ligilactobacillus murinus lowers blood pressure and intestinal permeability in spontaneously hypertensive ratsScientific Reports 2023; 13(1) doi: 10.1038/s41598-023-42377-7
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Sarah Galla, Saroj Chakraborty, Blair Mell, Matam Vijay-Kumar, Bina Joe. Microbiotal-Host Interactions and HypertensionPhysiology 2017; 32(3) doi: 10.1152/physiol.00003.2017
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Hideaki Shima, Shizuka Masuda, Yasuhiro Date, Amiu Shino, Yuuri Tsuboi, Mizuho Kajikawa, Yoshihiro Inoue, Taisei Kanamoto, Jun Kikuchi. Exploring the Impact of Food on the Gut Ecosystem Based on the Combination of Machine Learning and Network VisualizationNutrients 2017; 9(12) doi: 10.3390/nu9121307
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Yushu He, Ruilin Luo, Manying Xia, Jiayu Liu, Yanpeng Yao, Fenyi Min, Ruyi Jin, Ruolin Wang, Xiaoli Peng. Orally Administered Diosgenin Alleviates Colitis in Mice Induced by Dextran Sulfate Sodium through Gut Microbiota Modulation and Short-Chain Fatty Acid GenerationJournal of Medicinal Food 2022; 25(3) doi: 10.1089/jmf.2021.K.0086
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Joshua O. Amimo, C. N. Kunyanga, S. A. Raev, M. Kick, H. Micheal, L. J. Saif, Anastasia N. Vlasova. Stunting is associated with persistent and transferable alterations in the gut microbiomeGut Pathogens 2025; 17(1) doi: 10.1186/s13099-025-00723-2
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Emma T. Saltzman, Talia Palacios, Michael Thomsen, Luis Vitetta. Intestinal Microbiome Shifts, Dysbiosis, Inflammation, and Non-alcoholic Fatty Liver DiseaseFrontiers in Microbiology 2018; 9 doi: 10.3389/fmicb.2018.00061
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Zhihua Ren, Chaoyue Guo, Shumin Yu, Ling Zhu, Ya Wang, Hui Hu, Junliang Deng. Progress in Mycotoxins Affecting Intestinal Mucosal Barrier FunctionInternational Journal of Molecular Sciences 2019; 20(11) doi: 10.3390/ijms20112777
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Mira Beisembayeva, Yelena Shayakhmetova, Shynar Muratbekova, Irina Li, Eduard Yakupov, Rauan Kaiyrzhanov, Marina Grigolashvili, Cornelia Amalinei. A Comparative Analysis of the Gut Microbiota in Patients With Parkinson’s Disease Worldwide: A Systematic ReviewInternational Journal of Clinical Practice 2025; 2025(1) doi: 10.1155/ijcp/5511146
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Hiral Aghara, Manali Patel, Prashsti Chadha, Kirti Parwani, Ruchi Chaturvedi, Palash Mandal, Mirella Giovarelli. Unraveling the Gut–Liver–Brain Axis: Microbiome, Inflammation, and Emerging Therapeutic ApproachesMediators of Inflammation 2025; 2025(1) doi: 10.1155/mi/6733477
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Lars E. Hillege, David J. M. Barnett, Janine Ziemons, Romy Aarnoutse, Judith de Vos-Geelen, Robin van Geel, Maaike de Boer, Yvonne E. A. van Riet, Jeroen Vincent, John Penders, Marjolein L. Smidt. The gut microbiota during tamoxifen therapy in patients with breast cancerScientific Reports 2025; 15(1) doi: 10.1038/s41598-025-91734-1
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Hao Wu, Xiping Yuan, Yong He, Jinwei Gao, Min Xie, Zhonggui Xie, Rui Song, Dongsheng Ou. Niclosamide subacute exposure alters the immune response and microbiota of the gill and gut in black carp larvae, Mylopharyngodon piceusEcotoxicology and Environmental Safety 2024; 279 doi: 10.1016/j.ecoenv.2024.116512
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Ran Meng, Minmin Zeng, Ying Ji, Xinxiang Huang, Min Xu. The potential role of gut microbiota outer membrane vesicles in colorectal cancerFrontiers in Microbiology 2023; 14 doi: 10.3389/fmicb.2023.1270158
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Corrie M. Whisner, C. Athena Aktipis. The Role of the Microbiome in Cancer Initiation and Progression: How Microbes and Cancer Cells Utilize Excess Energy and Promote One Another’s GrowthCurrent Nutrition Reports 2019; 8(1) doi: 10.1007/s13668-019-0257-2
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Zichen Ning, Weipeng Pan, Yayan Huang, Na Zhang, Bingde Zheng, Xueqin Zhang, Meitian Xiao, Yucheng Yang, Jing Ye. Differences in anti‐obesity effects between raw and ripened Pu‐erh tea polyphenols: impact on gut microbiota enterotypesJournal of the Science of Food and Agriculture 2025; 105(7) doi: 10.1002/jsfa.14157
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Punnag Saha, Phillipp Hartmann. Impact of Gut Microbiome on Gut Permeability in Liver and Gut DiseasesMicroorganisms 2025; 13(6) doi: 10.3390/microorganisms13061188
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Qin Peng, Yahui Chen, Li Ding, Zimiao Zhao, Peiyu Yan, Kenneth B. Storey, Haitao Shi, Meiling Hong. Early-life intestinal microbiome in Trachemys scripta elegans analyzed using 16S rRNA sequencingPeerJ 2020; 8 doi: 10.7717/peerj.8501
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Megan R. Gillespie, Vikrant Rai, Swati Agrawal, Kalyana C. Nandipati. The Role of Microbiota in the Pathogenesis of Esophageal AdenocarcinomaBiology 2021; 10(8) doi: 10.3390/biology10080697
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Supapit Wongkuna, Sudeep Ghimire, Surang Chankhamhaengdecha, Tavan Janvilisri, Joy Scaria. Mediterraneibacter catenae SW178 sp. nov., an intestinal bacterium of feral chickenPeerJ 2021; 9 doi: 10.7717/peerj.11050
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Chiara Bellocchi, Álvaro Fernández‐Ochoa, Gaia Montanelli, Barbara Vigone, Alessandro Santaniello, Christian Milani, Rosa Quirantes‐Piné, Isabel Borrás‐Linares, Marco Ventura, Antonio Segura‐Carrettero, Marta Eugenia Alarcón‐Riquelme, Lorenzo Beretta. Microbial and metabolic multi‐omic correlations in systemic sclerosis patientsAnnals of the New York Academy of Sciences 2018; 1421(1) doi: 10.1111/nyas.13736
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Surender Jangra, Ramesh Pothuraju. Microbial Diversity, Interventions and Scope2020;  doi: 10.1007/978-981-15-4099-8_18
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Aleksandr Birg, Steve Hu, Henry C Lin. Reevaluating our understanding of lactulose breath tests by incorporating hydrogen sulfide measurementsJGH Open 2019; 3(3) doi: 10.1002/jgh3.12145
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Susana Delgado-Ocaña, Santiago Cuesta, Jacob Yount. From microbes to mind: germ-free models in neuropsychiatric researchmBio 2024; 15(10) doi: 10.1128/mbio.02075-24
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Xin Zong, Jie Fu, Bocheng Xu, Yizhen Wang, Mingliang Jin. Interplay between gut microbiota and antimicrobial peptidesAnimal Nutrition 2020; 6(4) doi: 10.1016/j.aninu.2020.09.002
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Katie J Koecher, Nicola M McKeown, Caleigh M Sawicki, Ravi S Menon, Joanne L Slavin. Effect of whole-grain consumption on changes in fecal microbiota: a review of human intervention trialsNutrition Reviews 2019; 77(7) doi: 10.1093/nutrit/nuz008
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Guanting Niu, Tunyu Jian, Yanan Gai, Jian Chen. Microbiota and plant-derived vesicles that serve as therapeutic agents and delivery carriers to regulate metabolic syndromeAdvanced Drug Delivery Reviews 2023; 196 doi: 10.1016/j.addr.2023.114774
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Julia Montenegro, Anissa M. Armet, Benjamin P. Willing, Edward C. Deehan, Priscila G. Fassini, João F. Mota, Jens Walter, Carla M. Prado. Exploring the Influence of Gut Microbiome on Energy Metabolism in HumansAdvances in Nutrition 2023; 14(4) doi: 10.1016/j.advnut.2023.03.015
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Alexander Pohl, Frederik Schünemann, Käthe Bersiner, Sebastian Gehlert. The Impact of Vegan and Vegetarian Diets on Physical Performance and Molecular Signaling in Skeletal MuscleNutrients 2021; 13(11) doi: 10.3390/nu13113884
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Áine Abautret-Daly, Elaine Dempsey, Adolfo Parra-Blanco, Carlos Medina, Andrew Harkin. Gut–brain actions underlying comorbid anxiety and depression associated with inflammatory bowel diseaseActa Neuropsychiatrica 2018; 30(5) doi: 10.1017/neu.2017.3
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Dong-Hyun Kim. Interaction of drugs with gut microbiota modulatorsDrug Metabolism Reviews 2023; 55(3) doi: 10.1080/03602532.2023.2197178
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Bethany A. Masson, Wendy Qin, Chloe J. Love, Carolina Gubert, Anthony J. Hannan. Biomarkers for Huntington's DiseaseContemporary Clinical Neuroscience 2023;  doi: 10.1007/978-3-031-32815-2_10
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Sara Mahdavi, Nicole M Anthony, Tabo Sikaneta, Paul Y Tam. Perspective: Multiomics and Artificial Intelligence for Personalized Nutritional Management of Diabetes in Patients Undergoing Peritoneal DialysisAdvances in Nutrition 2025; 16(3) doi: 10.1016/j.advnut.2025.100378
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Rafaela da Silva Rocha, Adrielly Suely Santos Pereira, Marília Oliveira Fonseca Goulart, Elaine Luiza Santos Soares de Mendonça, Alane Cabral Menezes de Oliveira. MODULAÇÃO DA MICROBIOTA INTESTINAL NO DIABETES MELLITUS GESTACIONAL: ALVO POTENCIAL TERAPÊUTICO NA ATENUAÇÃO DOS DESFECHOS ADVERSOS MATERNOS E FETAISRevista Contemporânea 2024; 4(9) doi: 10.56083/RCV4N9-048
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Chunjing Qiu, Chenxu Guo, Xia Xue, Pengya Feng, Qiang Zhang, Ya Li, Simeng Liu, Yingying Li, Ihtisham Bukhari, Feifei Ren, Yuexiao Zhang, Pengyuan Zheng, Yang Mi. Exposure to calcium stearyl lactylate induces hepatointestinal toxicity and gut microbiota dysbiosis in miceCurrent Research in Toxicology 2026; 10 doi: 10.1016/j.crtox.2026.100301
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Manuel Vaquero-Abellan, Francisco Genil Marquez, Pilar Aparicio Martínez. Fertility, Pregnancy, and Wellness2022;  doi: 10.1016/B978-0-12-818309-0.00020-4
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Min-Jae Kim, Young Ju Lee, Zahid Hussain, Hyojin Park. Effect of Probiotics on Improving Intestinal Mucosal Permeability and Inflammation after SurgeryGut and Liver 2025; 19(2) doi: 10.5009/gnl240170
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Ziqi Huang, Zixuan Huang, Zhiqiang Du, Xuezheng Gao, Ying Jiang, Zhenhe Zhou, Haohao Zhu. Role and mechanism of gut microbiota and metabolites in schizophrenia complicated with sleep disorderGut Microbes 2026; 18(1) doi: 10.1080/19490976.2025.2607817
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Chang Liu, Yu‐Li Wang, Yong‐Yu Yang, Ning‐Ping Zhang, Chen Niu, Xi‐Zhong Shen, Jian Wu. Novel approaches to intervene gut microbiota in the treatment of chronic liver diseasesThe FASEB Journal 2021; 35(10) doi: 10.1096/fj.202100939R
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Yomna E. Dean, Mohamed A. Shebl, Mohamed Doma, Rafeek W. Elmezayen, Jose J. Loayza Pintado, Samah S. Rouzan, Noheir Ashraf Ibrahem Fathy Hassan, Yasmeen E. Yaqout, Akiko Tokunaga, Chukwuebuka Anozie, Omar ElKoumi, Sameh S. Elawady, Tamer Mady, Sana N. Nizam, Yasser Etman, Rayees Nizam, Yusef Hazimeh, Mohamed Alazmy, Hani Aiash. Intestinal microbiome as a diagnostic marker of coronary artery disease: a systematic review and meta-analysisAnnals of Medicine & Surgery 2024; 86(10) doi: 10.1097/MS9.0000000000002516
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Bing Han, Chih‐Chun Janet Lin, Guo Hu, Meng C. Wang. ‘Inside Out’– a dialogue between mitochondria and bacteriaThe FEBS Journal 2019; 286(4) doi: 10.1111/febs.14692
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Haihong Jiang, Qinlu Zhang. Gut microbiota influences the efficiency of immune checkpoint inhibitors by modulating the immune system (Review)Oncology Letters 2024; 27(2) doi: 10.3892/ol.2024.14221
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Zhixuan Lan, Yi Wei, Kan Yue, Ruilin He, Zongbin Jiang. Genetically predicted immune cells mediate the association between gut microbiota and neuropathy painInflammopharmacology 2024; 32(5) doi: 10.1007/s10787-024-01514-y
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Chaorui Zhao, Qiuzhi Guo, Yu Chen, Nan Chen, Tong Liu, Ziting Liu, Chuanping Feng. Iron-carbon micro-electrolysis enhances microbial sulfate reduction and sulfur recoveryJournal of Environmental Management 2026; 397 doi: 10.1016/j.jenvman.2025.128343
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Aleksandr Birg, Nathaniel L. Ritz, Henry C. Lin. Microbiome and Metabolome in Diagnosis, Therapy, and other Strategic Applications2019;  doi: 10.1016/B978-0-12-815249-2.00020-8
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Venkata S. Akshintala, Rupjyoti Talukdar, Vikesh K. Singh, Michael Goggins. The Gut Microbiome in Pancreatic DiseaseClinical Gastroenterology and Hepatology 2019; 17(2) doi: 10.1016/j.cgh.2018.08.045
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Vidhi Desai, Anita L. Kozyrskyj, Stuart Lau, Omolara Sanni, Liz Dennett, Jens Walter, Maria B. Ospina. Effectiveness of Probiotic, Prebiotic, and Synbiotic Supplementation to Improve Perinatal Mental Health in Mothers: A Systematic Review and Meta-AnalysisFrontiers in Psychiatry 2021; 12 doi: 10.3389/fpsyt.2021.622181
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Himanshu Vishwakarma, Vikas Kumar Jain, Mansi Bhale, Amitabh Sharma. Exploring the microbiome: New horizons for emerging therapeuticsCurrent Trends in Pharmacy and Pharmaceutical Chemistry 2024; 6(3) doi: 10.18231/j.ctppc.2024.023
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Mon-Chien Lee, Ming-Ju Chen, Hsiao-Wen Huang, Wei-Kai Wu, Yi-Wei Lee, Hsing-Chun Kuo, Chi-Chang Huang. Probiotic Lactiplantibacillus plantarum Tana Isolated from an International Weightlifter Enhances Exercise Performance and Promotes Antifatigue Effects in MiceNutrients 2022; 14(16) doi: 10.3390/nu14163308
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Pranav Bhaskar, Sampan Attri, Anita Sharma, Shiwali Bisht. Influence of gut-microbiota on breast cancer development and managementScaffold Press Books 2022;  doi: 10.52679/978-81-952885-6-4_6
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Daria Piacentino, Silvia Grant-Beurmann, Carlotta Vizioli, Xiaobai Li, Catherine F. Moore, Victor Ruiz-Rodado, Mary R. Lee, Paule V. Joseph, Claire M. Fraser, Elise M. Weerts, Lorenzo Leggio. Gut microbiome and metabolome in a non-human primate model of chronic excessive alcohol drinkingTranslational Psychiatry 2021; 11(1) doi: 10.1038/s41398-021-01728-6
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Jonathan P. Sturgeon, Claire D. Bourke, Andrew J. Prendergast. Children With Noncritical Infections Have Increased Intestinal Permeability, Endotoxemia and Altered Innate Immune ResponsesPediatric Infectious Disease Journal 2019; 38(7) doi: 10.1097/INF.0000000000002311
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Bharati Kadamb Patel, Kadamb Haribhai Patel, Shabbir M. Moochhala. Gut microbiota intervention strategies using active components from medicinal herbs to evaluate clinical efficacy of type 2 diabetes – A reviewClinical and Translational Discovery 2023; 3(1) doi: 10.1002/ctd2.170
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Ruodi Yang, Ying Zhou, Yuhang Shen, Juntong Liu, Yan Shi, Yufeng Yang. Regulation of Traditional Chinese Medicine Gut Microbiota Short-Chain Fatty Acid Axis in Type 2 Diabetes Management: A ReviewThe American Journal of Chinese Medicine 2026; 54(01) doi: 10.1142/S0192415X26500011
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Chuanying Ren, Bin Hong, Shan Zhang, Di Yuan, Junran Feng, Shan Shan, Jingyi Zhang, Lijun Guan, Ling Zhu, Shuwen Lu. Autoclaving-treated germinated brown rice relieves hyperlipidemia by modulating gut microbiota in humansFrontiers in Nutrition 2024; 11 doi: 10.3389/fnut.2024.1403200
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Junyu Lu, Kai Tao. Urinary microbiota in patients with kidney stones: a systematic review and meta-analysisMicrobial Pathogenesis 2025; 205 doi: 10.1016/j.micpath.2025.107641
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Xuemei Wang, Jialin Xia, Changtao Jiang. Role of gut microbiota in the development of non-alcoholic fatty liver diseaseLiver Research 2019; 3(1) doi: 10.1016/j.livres.2019.01.006
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Marija Rakić, Jelena Repac, Tanja Lunić, Bojan Božić, Biljana Božić-Nedeljković. Crosstalk between vitamin status and gut microbiota: The key to maintaining immune homeostasis in the gutArhiv za farmaciju 2023; 73(6) doi: 10.5937/arhfarm73-46395
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Gautam Bhardwaj, Yassine Riadi, Muhammad Afzal, Pooja Bansal, Harpreet Kaur, Mahamedha Deorari, Rajiv Kumar Tonk, Waleed Hassan almalki, Imran Kazmi, Sami I. Alzarea, Neelima Kukreti, Lakshmi Thangavelu, Shakir Saleem. The hidden threat: Environmental toxins and their effects on gut microbiotaPathology - Research and Practice 2024; 255 doi: 10.1016/j.prp.2024.155173
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Abram Canowitz, Nitin S. Kamble, Nathan Muck, Komalpreet Kaur, Nathaniel Garay, Priyanka Bellala, Bhavesh Babulal Gabani, Nalinikanth Kotagiri. Microbial medicines: Unlocking the therapeutic potential of the microbiome in cancer treatmentJournal of Controlled Release 2026; 392 doi: 10.1016/j.jconrel.2026.114720
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Ioanna Aggeletopoulou, Christos Konstantakis, Stelios F. Assimakopoulos, Christos Triantos. The role of the gut microbiota in the treatment of inflammatory bowel diseasesMicrobial Pathogenesis 2019; 137 doi: 10.1016/j.micpath.2019.103774
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Aayushi Kadam, Deepak Kadam, Kanchanlata Tungare, Heena Shah. Nutrition, Food and Diet in Ageing and LongevityHealthy Ageing and Longevity 2021; 14 doi: 10.1007/978-3-030-83017-5_5
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J Reinder D Reuvers, Andries E Budding, Marjolein van Egmond, Hein B A C Stockmann, Jos W R Twisk, Geert Kazemier, Gabor S A Abis, Steven J Oosterling, G S A Abis, H J Bonjer, J B Tuynman, M van Egmond, H B A C Stockmann, N de Korte, Y I Z Acherman, S J Oosterling, F C den Boer, D J A Sonneveld, A E Budding, L Poort. Gut Proteobacteria levels and colorectal surgical infections: SELECT trialBritish Journal of Surgery 2023; 110(2) doi: 10.1093/bjs/znac288
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玉莲 黄. Research Progress in IgA NephropathyTraditional Chinese Medicine 2025; 14(11) doi: 10.12677/tcm.2025.1411728
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Raymond Guy Landgraaf, Michelle Nicté Bloem, Massimo Fumagalli, Marc Alexander Benninga, Fleur de Lorijn, Max Nieuwdorp. Acupuncture as multi-targeted therapy for the multifactorial disease obesity: a complex neuro-endocrine-immune interplayFrontiers in Endocrinology 2023; 14 doi: 10.3389/fendo.2023.1236370
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Biao Li, Ling Zhang, Li Wang, Yong Wei, Jiuqiang Guan, Qundi Mei, Ninghao Hao. Antimicrobial activity of yak beta-defensin 116 against Staphylococcus aureus and its role in gut homeostasisInternational Journal of Biological Macromolecules 2023; 253 doi: 10.1016/j.ijbiomac.2023.126761
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Mijeong Son, I Seul Park, Soochan Kim, Hyun Woo Ma, Ji Hyung Kim, Tae Il Kim, Won Ho Kim, Jaeyong Han, Seung Won Kim, Jae Hee Cheon. Novel Potassium-Competitive Acid Blocker, Tegoprazan, Protects Against Colitis by Improving Gut Barrier FunctionFrontiers in Immunology 2022; 13 doi: 10.3389/fimmu.2022.870817
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Hao Xu, Yu Zhang, Yinglang Zhang, Chong Shen, Zhe Zhang, Jian Wang, Diansheng Zhou, Zhouliang Wu, Yunkai Qie, Shenglai Liu, Dawei Tian, Hailong Hu, Changli Wu. Causal associations between gut microbiota and chronic prostatitis/chronic pelvic pain syndrome: a two-sample Mendelian randomization studyEgyptian Journal of Medical Human Genetics 2024; 25(1) doi: 10.1186/s43042-024-00540-3
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Momina Yasin, Fatemeh Vida Zohoori, Elizabeth Adjoa Kumah, Murali Subramanian, Paul Dean, Caroline Hayley Orr. Effect of Fluoride on Gut Microbiota: A Systematic ReviewNutrition Reviews 2025; 83(7) doi: 10.1093/nutrit/nuae202
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Francisca Villavicencio-Tejo, Margrethe A. Olesen, Laura Navarro, Nancy Calisto, Cristian Iribarren, Katherine García, Gino Corsini, Rodrigo A. Quintanilla. Gut-Brain Axis Deregulation and Its Possible Contribution to Neurodegenerative DisordersNeurotoxicity Research 2024; 42(1) doi: 10.1007/s12640-023-00681-0
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Su Liu, Guoqing Li, Huihui Xu, Qichang Wang, Yihao Wei, Qi Yang, Ao Xiong, Fei Yu, Jian Weng, Hui Zeng. “Cross-talk” between gut microbiome dysbiosis and osteoarthritis progression: a systematic reviewFrontiers in Immunology 2023; 14 doi: 10.3389/fimmu.2023.1150572
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Na Li, Mukaram Amatjan, Pengke He, Boheng Zhang, Xianyan Mai, Qianle Jiang, Haochen Xie, Xiaoni Shao. Integration of network pharmacology and intestinal flora to investigate the mechanism of action of Chinese herbal Cichorium intybus formula in attenuating adenine and ethambutol hydrochloride-induced hyperuricemic nephropathy in rats Pharmaceutical Biology 2022; 60(1) doi: 10.1080/13880209.2022.2147551
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Diren Beyoğlu, Jeffrey R. Idle. Molecular signatures of the gut microbiota that affect longevityBiochemical Pharmacology 2026;  doi: 10.1016/j.bcp.2026.118267
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Yufeng Du, Ya Gao, Mingyang Hu, Jinxiu Hou, Linhai Yang, Xianghuang Wang, Wenjuan Du, Jianxin Liu, Qingbiao Xu. Colonization and development of the gut microbiome in calvesJournal of Animal Science and Biotechnology 2023; 14(1) doi: 10.1186/s40104-023-00856-x
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Giovanni Bruno, Piera Zaccari, Giulia Rocco, Giulia Scalese, Cristina Panetta, Barbara Porowska, Stefano Pontone, Carola Severi. Proton pump inhibitors and dysbiosis: Current knowledge and aspects to be clarifiedWorld Journal of Gastroenterology 2019; 25(22): 2706-2719 doi: 10.3748/wjg.v25.i22.2706
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Viviane Lima Batista, Tales Fernando da Silva, Luís Cláudio Lima de Jesus, Nina Dias Coelho-Rocha, Fernanda Alvarenga Lima Barroso, Laisa Macedo Tavares, Vasco Azevedo, Pamela Mancha-Agresti, Mariana Martins Drumond. Probiotics, Prebiotics, Synbiotics, and Paraprobiotics as a Therapeutic Alternative for Intestinal MucositisFrontiers in Microbiology 2020; 11 doi: 10.3389/fmicb.2020.544490
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Xinyi Shen, Lihua Li, Zhen Sun, Guangyao Zang, Lili Zhang, Chen Shao, Zhongqun Wang. Gut Microbiota and Atherosclerosis—Focusing on the Plaque StabilityFrontiers in Cardiovascular Medicine 2021; 8 doi: 10.3389/fcvm.2021.668532
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Z. H. Hassan, F. Hugenholtz, E. G. Zoetendal, Hauke Smidt. Good Microbes in Medicine, Food Production, Biotechnology, Bioremediation, and Agriculture2022;  doi: 10.1002/9781119762621.ch8
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Tingli Qu, Nan Zhang, Junjie Cai, Chen Li, Yue Zhang, Xinxue Xu, Shuai Zhang, Wangwei Lv, Taigang Liang. Integrated bioinformatics and multi-omics reveal Astragalus extract’s gut-kidney axis mechanism in hyperuricemic nephropathy via purine metabolismPhytomedicine 2025; 146 doi: 10.1016/j.phymed.2025.157121
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Tiffany T. Sharma, Rebecca R. Rabizadeh, Vibhav S. Prabhakar, Matthew I. Bury, Arun K. Sharma. Evolving Experimental Platforms to Evaluate Ulcerative ColitisAdvanced Biology 2022; 6(10) doi: 10.1002/adbi.202200018
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Olusegun O. Onabajo, Joseph J. Mattapallil. Gut Microbiome Homeostasis and the CD4 T- Follicular Helper Cell IgA Axis in Human Immunodeficiency Virus InfectionFrontiers in Immunology 2021; 12 doi: 10.3389/fimmu.2021.657679
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Jiangyu Yan, Jing Ouyang, Stéphane Isnard, Xin Zhou, Vijay Harypursat, Jean-Pierre Routy, Yaokai Chen. Alcohol Use and Abuse Conspires With HIV Infection to Aggravate Intestinal Dysbiosis and Increase Microbial Translocation in People Living With HIV: A ReviewFrontiers in Immunology 2021; 12 doi: 10.3389/fimmu.2021.741658
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Yuxiang Wang, Can Xu, Xiaoyu Huang, Jiaxuan Zhu, Ming Wen, Hongxuan Liang, Yingying Yang, Lang Qin, Jinhui Huang, Jiawang Huang, Xu Huang, Zhuangwen Mao, Fangzhou Hu, Chang Wu, Shaojun Liu. Analysis of high-fat diet tolerance in hybrid culter based on digestive enzymes, gut microbiota, and liver transcriptomeMarine Life Science & Technology 2026;  doi: 10.1007/s42995-026-00389-y
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Patricia Iranzo, Ana Callejo, Juan David Assaf, Gaspar Molina, Daniel Esteban Lopez, David Garcia-Illescas, Nuria Pardo, Alejandro Navarro, Alex Martinez-Marti, Susana Cedres, Caterina Carbonell, Joan Frigola, Ramon Amat, Enriqueta Felip. Overview of Checkpoint Inhibitors Mechanism of Action: Role of Immune-Related Adverse Events and Their Treatment on Progression of Underlying CancerFrontiers in Medicine 2022; 9 doi: 10.3389/fmed.2022.875974
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Igor V. Popov, Ammar Algburi, Evgeniya V. Prazdnova, Maria S. Mazanko, Vladimir Elisashvili, Anzhelica B. Bren, Vladimir A. Chistyakov, Elizaveta V. Tkacheva, Vladimir I. Trukhachev, Irina M. Donnik, Yuri A. Ivanov, Dmitry Rudoy, Alexey M. Ermakov, Richard M. Weeks, Michael L. Chikindas. A Review of the Effects and Production of Spore-Forming Probiotics for PoultryAnimals 2021; 11(7) doi: 10.3390/ani11071941
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Xuan Tang, Xiaoyan Wang, Changfeng Man, Shiqi Zhang, Dandan Gong, Yakun Lang, Yu Fan. The role of gut microbiota in the perioperative management of gastric cancer and intervention methods: A systematic reviewEuropean Journal of Surgical Oncology 2025; 51(10) doi: 10.1016/j.ejso.2025.110343
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Satadal Adhikary, Prem Rajak, Abhratanu Ganguly, Suchandra Bhattacharya. Microbial Stress Survival2026;  doi: 10.1016/B978-0-443-27622-4.00023-7
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Chunli Kong, Renate Akkerman, Cynthia E. Klostermann, Martin Beukema, Marjolein M. P. Oerlemans, Henk A. Schols, Paul de Vos. Distinct fermentation of human milk oligosaccharides 3-FL and LNT2 and GOS/inulin by infant gut microbiota and impact on adhesion ofLactobacillus plantarumWCFS1 to gut epithelial cellsFood & Function 2021; 12(24) doi: 10.1039/D1FO02563E
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Sarah E. Webster, Duncan Vos, Thomas L. Rothstein, Nichol E. Holodick. Modulation of microbiome diversity and cytokine expression is influenced in a sex-dependent manner during agingFrontiers in Microbiomes 2022; 1 doi: 10.3389/frmbi.2022.994464
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Hannah E. Laue, Aislinn J. Gilmour, Valerie M. Tirado, Megan E. Romano. Conceptualizing the Role of the Microbiome as a Mediator and Modifier in Environmental Health Studies: A Scoping Review of Studies of Triclosan and the MicrobiomeCurrent Environmental Health Reports 2024; 11(1) doi: 10.1007/s40572-024-00428-9
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Tianzhu Liu, Chenhui Zhu, Pei Ma, Xiaoxuan Ma, Daidi Fan. Ginseng oligopeptide alleviates glycolipid metabolism disorders in db/db mice by regulating oxidative stress, inflammatory response and gut microbiota disorderFood Bioscience 2025; 69 doi: 10.1016/j.fbio.2025.106905
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Chemical Microbiology Part AMethods in Enzymology 2022; 664 doi: 10.1016/bs.mie.2021.11.022
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Ruqaiyyah Siddiqui, Zinb Makhlouf, Naveed Ahmed Khan. The increasing importance of the gut microbiome in acne vulgarisFolia Microbiologica 2022; 67(6) doi: 10.1007/s12223-022-00982-5
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Turfa K. Alqaydi, Alaa S. Bedir, Abdelghafar M. Abu-Elsaoud, Khaled A. El-Tarabily, Seham M. Al Raish. An Assessment of the Knowledge, Attitude, and Practice of Probiotics and Prebiotics among the Population of the United Arab EmiratesFoods 2024; 13(14) doi: 10.3390/foods13142219
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君 赵. Research Progress on the Relationship between Intestinal Flora and Cognitive Func-tion in Patients with SchizophreniaAdvances in Clinical Medicine 2022; 12(12) doi: 10.12677/ACM.2022.12121607
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Hassan Mivehchi, Aisan Eskandari-Yaghbastlo, Parnian Pour Bahrami, Anis Elhami, Farbod Faghihinia, Seyedeh Tabasom Nejati, Kimia Sadat Kazemi, Mohsen Nabi Afjadi. Exploring the role of oral bacteria in oral cancer: a narrative reviewDiscover Oncology 2025; 16(1) doi: 10.1007/s12672-025-01998-2
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Shengwei Cui, Shihui Guo, Qingmei Zhao, Yong Li, Yun Ma, Yongtao Yu. Alterations of microbiota and metabolites in the feces of calves with diarrhea associated with rotavirus and coronavirus infectionsFrontiers in Microbiology 2023; 14 doi: 10.3389/fmicb.2023.1159637
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Xian-Jie Bai, Yu-Chen Mei, Jia-Tong Zhao, Zhi-Ren Chen, Chen-Xi Yang, Xiao-Juan Dong, Jia-Wei Yu, Lin-Biao Xiang, Er-Zheng Zhou, Yong Chen, Jia-Yi Hao, Zhi-Jie Zhang, Yu-Xuan Liuyang, Lu Ren, Ying-Min Yao, Lei Zhang, Yi Lv, Qiang Lu. Changes in microbiome composition after fecal microbiota transplantation via oral gavage and magnetic navigation technology-assisted proximal colon/cecum enema in antibiotic knock-down rats: a comparative experimental studyBMC Microbiology 2025; 25(1) doi: 10.1186/s12866-025-04026-z
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Nahum Mendez-Sanchez, Carlos Esteban Coronel-Castillo, Jacqueline Cordova-Gallardo, Xingshun Qi. Antibiotics in Chronic Liver Disease and Their Effects on Gut MicrobiotaAntibiotics 2023; 12(10) doi: 10.3390/antibiotics12101475
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Dongying Bai, Caifang Guo, Penghui Ma, Ziwei Wang, Xiaodie Zhao, Xiqiang Ma, Xiaolin Xie, Yi Zhang, Fangshen Guo, Yushu Zhang, Bingkun Zhang, Cai Zhang, Wenrui Zhen, Yanbo Ma. Comprehensive analysis of the effects of high stocking density stress on broiler healthFrontiers in Veterinary Science 2026; 12 doi: 10.3389/fvets.2025.1741407
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Aya Shanti, Jeremy Teo, Cesare Stefanini. In Vitro Immune Organs-on-Chip for Drug Development: A ReviewPharmaceutics 2018; 10(4) doi: 10.3390/pharmaceutics10040278
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Minmin Zhan, Yongjia Cai, Chenxi Zhao, Bin Chen, Xiaoxuan Wang, Peiyi Shen, Yanhui Han, Mingyue Song, Yong Cao, Hang Xiao. Citrus Exosome-like Nanoparticles Reversed High-Fat Diet-Induced Microbiota Dysbiosis and Associated Short-Chain Fatty Acid ProductionJournal of Agricultural and Food Chemistry 2025; 73(37) doi: 10.1021/acs.jafc.5c04523
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Stelios F. Assimakopoulos, Gerasimos Eleftheriotis, Maria Lagadinou, Vassilios Karamouzos, Periklis Dousdampanis, Georgios Siakallis, Markos Marangos. SARS CoV-2-Induced Viral Sepsis: The Role of Gut Barrier DysfunctionMicroorganisms 2022; 10(5) doi: 10.3390/microorganisms10051050
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Thúlio Righeti Corrêa, Christine C. Gaylarde, José Antônio Baptista Neto, Jéssica de F. Delgado, Leonardo da S. Lima, Danieli L. Cunha, Estefan M. da Fonseca. The Impact of Microplastics on Global Food Production: A Brief Overview of This Complex SectorMicroplastics 2023; 2(4) doi: 10.3390/microplastics2040028
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Jessica Gama, Bianca Cruz Neves, Antonio Pereira. Developmental inequity and the impact of pesticide exposure on gut and brain health in developing nations – a Brazilian perspectiveHumanities and Social Sciences Communications 2025; 12(1) doi: 10.1057/s41599-024-04229-1
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Gaelle El-Khoury, Crystel Hajjar, Regina Geitani, Dolla Karam Sarkis, Marie-José Butel, Frédéric Barbut, Marianne Abifadel, Nathalie Kapel. Gut microbiota and viral respiratory infections: microbial alterations, immune modulation, and impact on disease severity: a narrative reviewFrontiers in Microbiology 2025; 16 doi: 10.3389/fmicb.2025.1605143
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Jyoti Sharma, Tuhina Banerjee, Manisha Naithani, Navin Kumar, Sudhir Kumar Singh, Somprakas Basu. Crohn’s Disease - The Current State of the Art2023;  doi: 10.5772/intechopen.110768
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Xiaoying Jian, Shiyan Jian, Baichuan Deng. Konjac Glucomannan: A functional food additive for preventing metabolic syndromeJournal of Functional Foods 2024; 115 doi: 10.1016/j.jff.2024.106108
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Ji Young Jung, Sang-Soo Han, Z-Hun Kim, Myung Hoo Kim, Hye Kyeong Kang, Hyun Mi Jin, Mi Hwa Lee. In-Vitro Characterization of Growth Inhibition against the Gut Pathogen of Potentially Probiotic Lactic Acid Bacteria Strains Isolated from Fermented ProductsMicroorganisms 2021; 9(10) doi: 10.3390/microorganisms9102141
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Xiyu Zhang, Heting Wang, Chunguang Xie, Zhipeng Hu, Yuan Zhang, Sihan Peng, Yuchi He, Jian Kang, Hong Gao, Haipo Yuan, Ya Liu, Gang Fan. Shenqi compound ameliorates type-2 diabetes mellitus by modulating the gut microbiota and metabolitesJournal of Chromatography B 2022; 1194 doi: 10.1016/j.jchromb.2022.123189
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Tadatsugu Morimoto, Takaomi Kobayashi, Toshihiko Kakiuchi, Motohiro Esaki, Masatsugu Tsukamoto, Tomohito Yoshihara, Hirohito Hirata, Shoji Yabuki, Masaaki Mawatari. Gut-spine axis: a possible correlation between gut microbiota and spinal degenerative diseasesFrontiers in Microbiology 2023; 14 doi: 10.3389/fmicb.2023.1290858
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Bryan Tungland. Human Microbiota in Health and Disease2018;  doi: 10.1016/B978-0-12-814649-1.00002-8
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Ki Tae Suk, Hong Koh. New perspective on fecal microbiota transplantation in liver diseasesJournal of Gastroenterology and Hepatology 2022; 37(1) doi: 10.1111/jgh.15729
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Yong-Zhi Lun, Wei Qiu, Wenqi Zhao, Hua Lin, Mintao Zhong, Jie Sun. Characteristics of Intestinal Flora in Pregnant Women with Mild Thalassemia Revealed by MetagenomicsJundishapur Journal of Microbiology 2021; 14(10) doi: 10.5812/jjm.119925
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Ruolan Zhang, Li Li, Gaojie Yu, Yang Li, Kexi Wei, Liang Lin, Yifeng Ye. Interaction between gut microbiota and anesthesia: mechanism exploration and translation challenges focusing on the gut-brain-liver axisFrontiers in Cellular and Infection Microbiology 2025; 15 doi: 10.3389/fcimb.2025.1626585
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Garance Coquant, Doriane Aguanno, Sandrine Pham, Nathan Grellier, Sophie Thenet, Véronique Carrière, Jean-Pierre Grill, Philippe Seksik. Gossip in the gut: Quorum sensing, a new player in the host-microbiota interactionsWorld Journal of Gastroenterology 2021; 27(42): 7247-7270 doi: 10.3748/wjg.v27.i42.7247
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Naama Rotem-Kohavi, James Keane, Gerard Clarke, Timothy G. Dinan, John F. Cryan, Fergus P. McCarthy, Tim F. Oberlander, Siobhain M. O’Mahony. Prenatal Stress and Child Development2021;  doi: 10.1007/978-3-030-60159-1_8
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Bei Pu, Hua Zhu, Liang Wei, Lijuan Gu, Shenqi Zhang, Zhihong Jian, Xiaoxing Xiong. The Involvement of Immune Cells Between Ischemic Stroke and Gut MicrobiotaTranslational Stroke Research 2024; 15(3) doi: 10.1007/s12975-023-01151-7
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Szymon Olędzki, Arnold Kukowka, Aldona Siennicka, Natalia Jakubiak, Dominika Maciejewska-Markiewicz, Radosław Kiedrowicz, Jarosław Kaźmierczak. Serum Zonulin and Lipopolysaccharide (LPS) Levels in Early Myocardial Infarction: Association with Left Ventricular Ejection FractionJournal of Clinical Medicine 2025; 14(17) doi: 10.3390/jcm14176216
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厚法 周. Research Progress of Probiotics in the Treatment of Nonalcoholic Fatty Liver DiseaseAdvances in Clinical Medicine 2022; 12(08) doi: 10.12677/ACM.2022.1281047
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Abhijita Talukder, Momi Deka, Gayatri Buragohain, Shreyansh Saha, Nilutpal Sharma Bora, Bhargab Jyoti Sahariah. Gut-joint axis in rheumatic diseases: Insights into pathogenesis and therapeutic strategiesMedicine in Microecology 2026; 29 doi: 10.1016/j.medmic.2026.100179
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Yanwei Wang, Xiaotong Li, Zuowei Li, Qiaoqiao Han, Tong Hu, Qiyue Zhang, Honglei Qu, Haihua Zhang, Yangyan Qu, Donghui Shi, Qiugang Ma, Shimeng Huang. Comparative analysis of composition and spatial variations in the foregut microbiota of male and female donkeysFrontiers in Microbiology 2025; 16 doi: 10.3389/fmicb.2025.1532265
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Riyasdeen Anvarbatcha, Faisal Kunnathodi, Amr A. Arafat, Sarfuddin Azmi, Mohammad Mustafa, Ishtiaque Ahmad, Haifa F. Alotaibi. Harnessing Probiotics: Exploring the Role of the Gut Microbiome in Combating ObesityProbiotics and Antimicrobial Proteins 2025; 17(4) doi: 10.1007/s12602-025-10605-3
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Yunhua Wang, Qiaorong Liu, Yongcong Chen, Yaling Qian, Bei Pan, Long Ge, Qi Wang, Guowu Ding, Jiancheng Wang. Global Trends and Future Prospects of Child Nutrition: A Bibliometric Analysis of Highly Cited PapersFrontiers in Pediatrics 2021; 9 doi: 10.3389/fped.2021.633525
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Vivek Kumar Sharma. Diabetes-induced depression: unravelling the role of gut dysbiosisJournal of Diabetes & Metabolic Disorders 2025; 24(1) doi: 10.1007/s40200-025-01643-3
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Azhar S Sindi, Donna T Geddes, Mary E Wlodek, Beverly S Muhlhausler, Matthew S Payne, Lisa F Stinson. Can we modulate the breastfed infant gut microbiota through maternal diet?FEMS Microbiology Reviews 2021; 45(5) doi: 10.1093/femsre/fuab011
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Jia-Ran Lin, Zi-Ting Wang, Jiao-Jiao Sun, Ying-Ying Yang, Xue-Xin Li, Xin-Ru Wang, Yue Shi, Yuan-Yuan Zhu, Rui-Ting Wang, Mi-Na Wang, Fei-Yu Xie, Peng Wei, Ze-Huan Liao. Gut microbiota and diabetic kidney diseases: Pathogenesis and therapeutic perspectivesWorld Journal of Diabetes 2022; 13(4): 308-318 doi: 10.4239/wjd.v13.i4.308
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Ruilin Zhang, Dongying Bai, Wenrui Zhen, Xiaodi Hu, Haojie Zhang, Jiale Zhong, Yi Zhang, Koichi Ito, Bingkun Zhang, Yajun Yang, Jianyong Li, Yanbo Ma. Aspirin eugenol ester affects ileal barrier function, inflammatory response and microbiota in broilers under lipopolysaccharide-induced immune stress conditionsFrontiers in Veterinary Science 2024; 11 doi: 10.3389/fvets.2024.1401909
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Venita Patel. A Prescription for Healthy Living2021;  doi: 10.1016/B978-0-12-821573-9.00015-1
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Dandan Sheng, Song Wang, Peihong Li, Jiaxin Li, Zheng Xiao, Hui Lv, Weiping Liu, Bo Xiao, Luo Zhou. Evidence for genetic causal relationships between gut microbiome, metabolites, and myasthenia gravis: a bidirectional Mendelian randomization studyFrontiers in Immunology 2023; 14 doi: 10.3389/fimmu.2023.1279845
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Chuan Song, Lei Wang, Xiaojian Ji, Yiwen Wang, Lidong Hu, Xingkang Liu, Jiaxin Zhang, Simin Liao, Yishu Yan, Jian Zhu, Feng Huang. Dietary Fiber Intake Influences Changes in Ankylosing Spondylitis Disease StatusJournal of Clinical Medicine 2023; 12(4) doi: 10.3390/jcm12041621
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Yingying Ma, Min Zhang, Zhenyan Wang, Le Cao, Yanpeng Li, Zhenzhou Wan, Yakhouba Kane, Gang Wang, Xin Li, Chiyu Zhang. Short-term antiretroviral therapy may not correct the dysregulations of plasma virome and cytokines induced by HIV-1 infectionVirulence 2025; 16(1) doi: 10.1080/21505594.2025.2467168
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Runqiu Chen, Huaijun Tu, Tingtao Chen. Potential Application of Living Microorganisms in the Detoxification of Heavy MetalsFoods 2022; 11(13) doi: 10.3390/foods11131905
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N. V. Zakharevich, V. N. Danilenko. Correction of the Taxonomic Composition of Human Gut Microbiota: Serine-Threonine Protein Kinases as BiotargetsBiology Bulletin Reviews 2020; 10(6) doi: 10.1134/S2079086420060080
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Adrianna Sobolewska, Aleksandra Dunisławska, Katarzyna Stadnicka. Natural substances in cancer—do they work?Physical Sciences Reviews 2023; 8(9) doi: 10.1515/psr-2019-0060
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Pharmacological insights into gut microbiota modulation in systemic lupus erythematosus: Mechanisms, treatment strategies, and clinical implicationsThe Journal of Pharmacology and Experimental Therapeutics 2025; 392(9) doi: 10.1016/j.jpet.2025.103659
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Jingru Ren, Zhenyu Niu, Jianchun Wang, Jing Guo, Hongjun Hao, Feng Gao, Ran Liu, Zhaoxia Wang. The link between gut microbiota and multiple sclerosis from the perspective of barrier functionFrontiers in Immunology 2025; 16 doi: 10.3389/fimmu.2025.1652796
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Seung-Hoon Lee, Changsu Han, Cheolmin Shin. IUPHAR review: Microbiota-gut-brain axis and its role in neuropsychiatric disordersPharmacological Research 2025; 216 doi: 10.1016/j.phrs.2025.107749
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Jieqing Huang, Zihan Chen, Mengqi Chen, Zhirong Zeng, Xiaojun Zhuang. Specific alterations in the gut microbiome and metabolome across disease locations of Crohn’s disease: a systematic reviewBMC Gastroenterology 2026; 26(1) doi: 10.1186/s12876-026-04898-z
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Kushal Roychoudhuri, Saikat Santra, Rajdip Goswami, Bhaskar Pal. Impact of Yoga and Proper Diet on Cardiopulmonary FunctionAdvances in Medical Diagnosis, Treatment, and Care 2024;  doi: 10.4018/979-8-3693-8267-7.ch008
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Javier Calleja-Conde, Victor Echeverry-Alzate, Kora-Mareen Bühler, Pedro Durán-González, Jose Morales-García, Lucía Segovia-Rodríguez, Fernando Rodríguez de Fonseca, Elena Giné, Jose López-Moreno. The Immune System through the Lens of Alcohol Intake and Gut MicrobiotaInternational Journal of Molecular Sciences 2021; 22(14) doi: 10.3390/ijms22147485
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Abeer Al-Dbass, Abir Ben Bacha, Nadine M.S. Moubayed, Ramesa Shafi Bhat, Manar Al-Mutairi, Osima M. Alnakhli, Majidh Al-Mrshoud, Hanan Alfawaz, Maha Daghestani, Afaf El-Ansary. Comparative Studies on Phospholipase A2 as a Marker for Gut Microbiota- liver-brain Axis in a rodent Model of AutismCurrent Proteomics 2021; 18(2) doi: 10.2174/1570164617999200519100634
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Ashwinipriyadarshini Megur, Daiva Baltriukienė, Virginija Bukelskienė, Aurelijus Burokas. The Microbiota–Gut–Brain Axis and Alzheimer’s Disease: Neuroinflammation Is to Blame?Nutrients 2020; 13(1) doi: 10.3390/nu13010037
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Shuangwei Hong, Longhao Chen, Xingchen Zhou, Yuanshen Huang, Yu Tian, Huijie Hu, Bei Yu, Hongjiao Wu, Chao Yang, Zhizhen Lv, Lijiang Lv. Genetically predicted causal effects of gut microbiota on spinal pain: a two-sample Mendelian randomization analysisFrontiers in Microbiology 2024; 15 doi: 10.3389/fmicb.2024.1357303
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Hannah Rössler, Vera Flasbeck, Sören Gatermann, Martin Brüne. Alterations of the gut microbiota in borderline personality disorderJournal of Psychosomatic Research 2022; 158 doi: 10.1016/j.jpsychores.2022.110942
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Xingbing Wu, Xuemei Li, Yongjiu Zhu, Jinling Gong, Tingbing Zhu, Jiajia Ni, Deguo Yang. Effects of Water Temperature on the Growth, Antioxidant Capacity, and Gut Microbiota of Percocypris pingi JuvenilesFishes 2022; 7(6) doi: 10.3390/fishes7060374
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Iara Cassandra V. Ibay, Elesa Poteres, Allison Isabelli, Aarya Bavare, Kristina Martinez-Guryn. Nutritional Epigenomics2026;  doi: 10.1016/B978-0-443-15572-7.00024-3
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Jinjin Yang, Jiaoying Song, Jiedong Zhou, Hui Lin, Zhuonan Wu, Nan Liu, Wenqing Xie, Hangyuan Guo, Jufang Chi. Functional components of Chinese rice wine can ameliorate diabetic cardiomyopathy through the modulation of autophagy, apoptosis, gut microbiota, and metabolitesFrontiers in Cardiovascular Medicine 2022; 9 doi: 10.3389/fcvm.2022.940663
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V.O. Kaybysheva, M.E. Zharova, K.Yu. Filimendikova, E.L. Nikonov. Human Microbiome: age-related changes and functionsDokazatel'naya gastroenterologiya 2020; 9(2) doi: 10.17116/dokgastro2020902142
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O. V. Gaus, M. A. Livzan. Irritable bowel syndrome: what's new? (UEG Week Virtual 2020 materials review)Medical alphabet 2021; 1(6) doi: 10.33667/2078-5631-2021-6-41-47
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Silvia Estarriaga-Navarro, Teresa Valls, Daniel Plano, Carmen Sanmartín, Nieves Goicoechea. Potential Application of Plant By-Products in Biomedicine: From Current Knowledge to Future OpportunitiesAntioxidants 2025; 14(8) doi: 10.3390/antiox14080942
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Saman Khalesi, David Wayne Johnson, Katrin Campbell, Susan Williams, Andrew Fenning, Sonia Saluja, Christopher Irwin. Effect of probiotics and synbiotics consumption on serum concentrations of liver function test enzymes: a systematic review and meta-analysisEuropean Journal of Nutrition 2018; 57(6) doi: 10.1007/s00394-017-1568-y
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Haibo Hu, Fengchan Wang, Ping Han, Peng Li, Kun Wang, Huan Song, Guojing Zhao, Yue Li, Xuechao Lu, Weihong Tao, Huantian Cui. Bu-Fei-Huo-Xue capsule alleviates bleomycin-induced pulmonary fibrosis in mice through modulating gut microbiotaFrontiers in Pharmacology 2023; 14 doi: 10.3389/fphar.2023.1084617
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Paulus Jochems, Johan Garssen, Antonius Van Keulen, Rosalinde Masereeuw, Prescilla Jeurink. Evaluating Human Intestinal Cell Lines for Studying Dietary Protein AbsorptionNutrients 2018; 10(3) doi: 10.3390/nu10030322
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Hammad Ullah, Ayesha Khan, Kannan R. R. Rengasamy, Alessandro Di Minno, Roberto Sacchi, Maria Daglia. The Efficacy of S-Adenosyl Methionine and Probiotic Supplementation on Depression: A Synergistic ApproachNutrients 2022; 14(13) doi: 10.3390/nu14132751
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Eun Ji Yoon, So Rok Lee, Beulah Favour Ortutu, Jong-Oh Kim, Varun Jaiswal, Sooyeon Baek, Su-In Yoon, Sang Ki Lee, Jin Hwan Yoon, Hae-Jeung Lee, Jin Ah Cho. Effect of Endurance Exercise Training on Gut Microbiota and ER StressInternational Journal of Molecular Sciences 2024; 25(19) doi: 10.3390/ijms251910742
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Muhammad Sohail Khan, Muhammad Ikram, Jun Sung Park, Tae Ju Park, Myeong Ok Kim. Gut Microbiota, Its Role in Induction of Alzheimer’s Disease Pathology, and Possible Therapeutic Interventions: Special Focus on AnthocyaninsCells 2020; 9(4) doi: 10.3390/cells9040853
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Kholoud Al Jebawi, Jobran Toami, Adel Ayash, Razan Salha, Mira Al Shoufy, Jamil Nasrallah , Naseeb Danaf, Lea El Ghawi, Layal Msheik, Hiba Hamdar. Probiotics: A Promising Ally in Burn TreatmentASIDE Internal Medicine 2025; 1(4) doi: 10.71079/ASIDE.IM.06022554
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Nadia Marascio, Giuseppe Guido Maria Scarlata, Francesco Romeo, Claudia Cicino, Enrico Maria Trecarichi, Angela Quirino, Carlo Torti, Giovanni Matera, Alessandro Russo. The Role of Gut Microbiota in the Clinical Outcome of Septic Patients: State of the Art and Future PerspectivesInternational Journal of Molecular Sciences 2023; 24(11) doi: 10.3390/ijms24119307
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Chaiyavat Chaiyasut, Bhagavathi Sundaram Sivamaruthi, Narissara Lailerd, Sasithorn Sirilun, Subramanian Thangaleela, Suchanat Khongtan, Muruganantham Bharathi, Periyanaina Kesika, Manee Saelee, Thiwanya Choeisoongnern, Pranom Fukngoen, Sartjin Peerajan, Phakkharawat Sittiprapaporn. Influence of Bifidobacterium breve on the Glycaemic Control, Lipid Profile and Microbiome of Type 2 Diabetic Subjects: A Preliminary Randomized Clinical TrialPharmaceuticals 2023; 16(5) doi: 10.3390/ph16050695
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Vanessa Sepúlveda-Rivera, Gerianne Olivieri-Henry, Hiram Morales-González, Javier Ruiz-Adames, Carlos Herrero-Rivera, Alexandra Rentas-Echeverria, Valerie Cardona-Berdecia, Cecilia Soler-Llompart, Ana C. Sala-Morales, Guillermo Pérez-Montero, Eric Blanco-Ruiz, Filipa Godoy-Vitorino. Gut microbiota distinguishes aging hispanics with Alzheimer’s disease: associations with cognitive impairment and severityScientific Reports 2025; 15(1) doi: 10.1038/s41598-025-13262-2
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Spyridon G. Koulas, Christos K. Stefanou, Stefanos K. Stefanou, Kostas Tepelenis, Nikolaos Zikos, Konstantinos Tepetes, Andreas Kapsoritakis. Gut Microbiota in Patients with Morbid Obesity Before and After Bariatric Surgery: a Ten-Year Review Study (2009–2019)Obesity Surgery 2021; 31(1) doi: 10.1007/s11695-020-05074-2
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Hana Kiňová Sepová, Boris Dudík, Andrea Bilková. Gut microbiota: its development and relation to certain diseasesČeská a slovenská farmacie 2017; 66(6) doi: 10.36290/csf.2017.038
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SEHRISH ABBAS, BUSHRA UZAIR, MAISRA AZHAR BUTT, FARID MENAA, BARKAT A. KHAN. Gut microbiome modulation: Ancillary effects of inorganic nanoparticles on gut microfloraBIOCELL 2023; 47(2) doi: 10.32604/biocell.2023.025311
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Mariana Andrade Aganetti, Clênio Silva Cruz, Izabela Galvão, Daiane Fátima Engels, Mayra Fernanda Ricci, Angélica Thomaz Vieira. Comprehensive Pharmacology2022;  doi: 10.1016/B978-0-12-820472-6.00128-6
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Weidong Wu, Tianwei Meng, Lichao Han, Fangfang Jin, Pengfei Han, Yanyan Zhou. Bridging traditional Chinese medicine and Alzheimer’s disease: the pivotal role of gut microbiota in multitarget therapeutic mechanismsFrontiers in Pharmacology 2025; 16 doi: 10.3389/fphar.2025.1630205
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Wesley J. Sparagon, Emily C. Gentry, Jeremiah J. Minich, Lisa Vollbrecht, Lieve M. L. Laurens, Eric E. Allen, Neil A. Sims, Pieter C. Dorrestein, Linda Wegley Kelly, Craig E. Nelson. Fine scale transitions of the microbiota and metabolome along the gastrointestinal tract of herbivorous fishesAnimal Microbiome 2022; 4(1) doi: 10.1186/s42523-022-00182-z
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Haley A. Hallowell, Keah V. Higgins, Morgan Roberts, Robert M. Johnson, Jenna Bayne, Herris Stevens Maxwell, Terry Brandebourg, Elizabeth Hiltbold Schwartz. Longitudinal Analysis of the Intestinal Microbiota in the Obese Mangalica Pig Reveals Alterations in Bacteria and Bacteriophage Populations Associated With Changes in Body Composition and DietFrontiers in Cellular and Infection Microbiology 2021; 11 doi: 10.3389/fcimb.2021.698657
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Bo Qiao, Jing Liu, Na Deng, Ying Cai, Yao Bian, Yueying Wu, Zhoujin Tan. Gut content microbiota dysbiosis and dysregulated lipid metabolism in diarrhea caused by high-fat diet in a fatigued stateFood & Function 2023; 14(8) doi: 10.1039/D3FO00378G
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Kristien E. Bouter, Daniël H. van Raalte, Albert K. Groen, Max Nieuwdorp. Role of the Gut Microbiome in the Pathogenesis of Obesity and Obesity-Related Metabolic DysfunctionGastroenterology 2017; 152(7) doi: 10.1053/j.gastro.2016.12.048
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Ling Qu, Qing Cheng, Yan Wang, Hui Mu, Yunfeng Zhang. COPD and Gut–Lung Axis: How Microbiota and Host Inflammasome Influence COPD and Related TherapeuticsFrontiers in Microbiology 2022; 13 doi: 10.3389/fmicb.2022.868086
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Xue Bai, Yu Shi, Lipeng Tang, Li Chen, Huimei Fan, Haoding Wang, Jie Wang, Xianbo Jia, Shiyi Chen, Songjia Lai. Heat Stress Affects Faecal Microbial and Metabolic Alterations of RabbitsFrontiers in Microbiology 2022; 12 doi: 10.3389/fmicb.2021.817615
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GaYeong Won, Soo-Im Choi, NaYeong Park, Ji-Eun Kim, Chang-Ho Kang, Gun-Hee Kim. In Vitro Antidiabetic, Antioxidant Activity, and Probiotic Activities of Lactiplantibacillus plantarum and Lacticaseibacillus paracasei StrainsCurrent Microbiology 2021; 78(8) doi: 10.1007/s00284-021-02588-5
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Simon Milling, Umer Zeeshan Ijaz, Danae Venieri, George E. Christidis, Nicholas J. W. Rattray, Iosifina Gounaki, Anna Andrusaite, Aravind Hareendran, Charles W. Knapp, Alexander X. Jones, Effie Photos-Jones, Sayed Haidar Abbas Raza. Beneficial modulation of the gut microbiome by leachates of Penicillium purpurogenum in the presence of clays: A model for the preparation and efficacy of historical Lemnian EarthPLOS ONE 2024; 19(12) doi: 10.1371/journal.pone.0313090
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Monica Profir, Oana Alexandra Roşu, Bogdan Severus Gaspar, Sanda Maria Cretoiu. Nutrition and Complementary Medicine in Cancer: An Interdisciplinary ApproachInterdisciplinary Cancer Research 2024; 27 doi: 10.1007/16833_2024_305
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Pengpeng Zhang, Jinwen Chen, Yingzi Ming, Ying Niu. Probiotics treatment ameliorated mycophenolic acid-induced colitis by enhancing intestinal barrier function and improving intestinal microbiota dysbiosis in miceFrontiers in Microbiology 2023; 14 doi: 10.3389/fmicb.2023.1153188
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Fukuan Du, Yan Li, Yongkai Tang, Shengyan Su, Juhua Yu, Fan Yu, Jianlin Li, Hongxia Li, Meiyao Wang, Pao Xu. Response of the gut microbiome of Megalobrama amblycephala to crowding stressAquaculture 2019; 500 doi: 10.1016/j.aquaculture.2018.10.067
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Marine Jauvain, Sarah Courtois, Philippe Lehours, Emilie Bessède. Metformin Modifies the Gut Microbiota of Mice Infected with Helicobacter pyloriPharmaceuticals 2021; 14(4) doi: 10.3390/ph14040329
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Rudradeep Hazra, Soumyadeep Chattopadhyay, Arijit Mallick, Sakuntala Gayen, Souvik Roy. Revealing the therapeutic properties of gut microbiota: transforming cancer immunotherapy from basic to clinical approachesMedical Oncology 2024; 41(7) doi: 10.1007/s12032-024-02416-3
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Winnie Chepkirui Langatt, George Isanda Omwenga, George F. Obiero, Chepukosi Kennedy, Alfred Orina Isaac, James Nyabuga Nyariki. Sequential exposure to multiple antibiotics depleted glutathione in hepatocytes, disrupted hematological profile, and inflammatory responses in a mouse modelComparative Clinical Pathology 2025; 34(4) doi: 10.1007/s00580-025-03670-1
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Caroline H. Best, Yunyao Qu, Kelly M. Tinker, Erin N. Madden, James G. Farmar. Xylanase from Trichoderma longibrachiatum produces xylooligosaccharides from wheat xylans under simulated human gastrointestinal conditions: a novel prebiotic strategyFood Chemistry 2025; 496 doi: 10.1016/j.foodchem.2025.146916
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Martinna Bertolini, Amit Ranjan, Angela Thompson, Patricia I. Diaz, Takanori Sobue, Kendra Maas, Anna Dongari-Bagtzoglou, Mairi C. Noverr. Candida albicans induces mucosal bacterial dysbiosis that promotes invasive infectionPLOS Pathogens 2019; 15(4) doi: 10.1371/journal.ppat.1007717
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Jung A Eom, Goo Hyun Kwon, Na Yeon Kim, Eun Ju Park, Sung Min Won, Jin Ju Jeong, Ganesan Raja, Haripriya Gupta, Yoseph Asmelash Gebru, Satyapriya Sharma, Ye Rin Choi, Hyeong Seop Kim, Sang Jun Yoon, Ji Ye Hyun, Min Kyo Jeong, Hee Jin Park, Byeong Hyun Min, Mi Ran Choi, Dong Joon Kim, Ki Tae Suk. Diet-Regulating Microbiota and Host Immune System in Liver DiseaseInternational Journal of Molecular Sciences 2021; 22(12) doi: 10.3390/ijms22126326
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Carolina Osorio, Tulasi Kanukuntla, Eddie Diaz, Nyla Jafri, Michael Cummings, Adonis Sfera. The Post-amyloid Era in Alzheimer's Disease: Trust Your Gut FeelingFrontiers in Aging Neuroscience 2019; 11 doi: 10.3389/fnagi.2019.00143
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Chiara Argentini, Leonardo Mancabelli, Giulia Alessandri, Chiara Tarracchini, Margherita Barbetti, Luca Carnevali, Giulia Longhi, Alice Viappiani, Rosaria Anzalone, Christian Milani, Andrea Sgoifo, Douwe van Sinderen, Marco Ventura, Francesca Turroni, Andrew J. McBain. Exploring the Ecological Effects of Naturally Antibiotic-Insensitive Bifidobacteria in the Recovery of the Resilience of the Gut Microbiota during and after Antibiotic TreatmentApplied and Environmental Microbiology 2022; 88(12) doi: 10.1128/aem.00522-22
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Deciphering the tripartite interaction of urbanized environment, gut microbiome and cardio-metabolic diseaseJournal of Environmental Management 2025; 377 doi: 10.1016/j.jenvman.2025.124693
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Xueting Guan, Yujing Feng, Yunyao Jiang, Yeye Hu, Ji Zhang, Zhengpeng Li, Chao Song, Fu Li, Jincai Hou, Ting Shen, Weicheng Hu. Simulated digestion and in vitro fermentation of a polysaccharide from lotus (Nelumbo nucifera Gaertn.) root residue by the human gut microbiotaFood Research International 2022; 155 doi: 10.1016/j.foodres.2022.111074
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Ting Chen, Mingyue Shen, Qiang Yu, Yi Chen, Huiliang Wen, Hanyu Lu, Shuai Chen, Jianhua Xie. Purple red rice anthocyanins alleviate intestinal damage in cyclophosphamide-induced mice associated with modulation of intestinal barrier function and gut microbiotaFood Chemistry 2022; 397 doi: 10.1016/j.foodchem.2022.133768
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Eva Zikou, Chrysi Koliaki, Konstantinos Makrilakis. The Role of Fecal Microbiota Transplantation (FMT) in the Management of Metabolic Diseases in Humans: A Narrative ReviewBiomedicines 2024; 12(8) doi: 10.3390/biomedicines12081871
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Haojie Tang, Xiangyan Zhang, Fengqin Yang, Changquan Zhang, Fernand Jocelin Ngando, Lipin Ren, Yadong Guo. Effect of Ciprofloxacin on the Composition of Intestinal Microbiota in Sarcophaga peregrina (Diptera: Sarcophagidae)Microorganisms 2023; 11(12) doi: 10.3390/microorganisms11122867
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Zhigang Zuo, Liu Pei, Tianzhi Liu, Xiujuan Liu, Yuhong Chen, Zhenjie Hu. Investigation of Gut Microbiota Disorders in Sepsis and Sepsis Complicated with Acute Gastrointestinal Injury Based on 16S rRNA Genes Illumina SequencingInfection and Drug Resistance 2023;  doi: 10.2147/IDR.S440335
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Jing‐yu Jin, Xin‐yu Yang, Ru Feng, Meng‐liang Ye, Hui Xu, Jing‐yue Wang, Jia‐chun Hu, Heng‐tong Zuo, Jin‐yue Lu, Jian‐ye Song, Yi Zhao, Yan Wang, Qian Tong. Gut Microbiota‐Derived Metabolites Orchestrate Metabolic Reprogramming in Diabetic Cardiomyopathy: Mechanisms and Therapeutic FrontiersThe FASEB Journal 2025; 39(17) doi: 10.1096/fj.202501579RR
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Margaret Vourakis, Gaétan Mayer, Guy Rousseau. The Role of Gut Microbiota on Cholesterol Metabolism in AtherosclerosisInternational Journal of Molecular Sciences 2021; 22(15) doi: 10.3390/ijms22158074
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Chang Hun Lee, Yunjung Choi, Seung Young Seo, Seong-Hun Kim, In Hee Kim, Sang Wook Kim, Soo Teik Lee, Seung Ok Lee. Addition of probiotics to antibiotics improves the clinical course of pneumonia in young people without comorbidities: a randomized controlled trialScientific Reports 2021; 11(1) doi: 10.1038/s41598-020-79630-2
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Marta C. Coelho, Célia Costa, Dalila Roupar, Sara Silva, A. Sebastião Rodrigues, José A. Teixeira, Manuela E. Pintado. Modulation of the Gut Microbiota by Tomato Flours Obtained after Conventional and Ohmic Heating Extraction and Its Prebiotic PropertiesFoods 2023; 12(9) doi: 10.3390/foods12091920
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Laura Wosinska, Paul D. Cotter, Orla O’Sullivan, Caitriona Guinane. The Potential Impact of Probiotics on the Gut Microbiome of AthletesNutrients 2019; 11(10) doi: 10.3390/nu11102270
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Nian Liu, Haoyu Wang, Zizhen Yang, Kunyi Zhao, Shangyong Li, Ningning He. The role of functional oligosaccharides as prebiotics in ulcerative colitisFood & Function 2022; 13(13) doi: 10.1039/D2FO00546H
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Gabriela Gama Freire Alberca, Naiane Samira Souza Cardoso, Rosa Liliana Solis-Castro, Viviane Nakano, Ricardo Wesley Alberca. Intestinal inflammation and the microbiota: Beyond diversityWorld Journal of Gastroenterology 2022; 28(26): 3274-3278 doi: 10.3748/wjg.v28.i26.3274
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Elise N. Millar, Michael G. Surette, Karen A. Kidd. Altered microbiomes of aquatic macroinvertebrates and riparian spiders downstream of municipal wastewater effluentsScience of The Total Environment 2022; 809 doi: 10.1016/j.scitotenv.2021.151156
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Jiali Yan, Zhenhu Wu, Li Deng, Chunzhen Huang, Yuting Jing, Xiao-yin Chen, Yinji Xu. Comprehensive analysis of the gut microbiota in patients with chronic obstructive pulmonary disease of varying severity-A prospective, observational studyHeliyon 2024; 10(11) doi: 10.1016/j.heliyon.2024.e31512
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Elissavet Anestiadou, Stavros Stamiris, Orestis Ioannidis, Savvas Symeonidis, Stefanos Bitsianis, Konstantinos Bougioukas, Thomas Karagiannis, Efstathios Kotidis, Manousos-Georgios Pramateftakis, Ioannis Mantzoros, Angeliki Cheva, Georgios Geropoulos, Christiana Chatzianestiadou, Magdalini Kaprianou, Freiderikos Tserkezidis, Stamatios Angelopoulos. Comparison of Negative Pressure Wound Therapy Systems and Conventional Non-Pressure Dressings on Surgical Site Infection Rate After Stoma Reversal: Systematic Review and Meta-Analysis of Randomized Controlled TrialsJournal of Clinical Medicine 2025; 14(5) doi: 10.3390/jcm14051654
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Su Lee, Yeojun Yun, Soo Kim, Eun-Ju Lee, Yoosoo Chang, Seungho Ryu, Hocheol Shin, Hyung-Lae Kim, Han-Na Kim, Jin Lee. Association between Cigarette Smoking Status and Composition of Gut Microbiota: Population-Based Cross-Sectional StudyJournal of Clinical Medicine 2018; 7(9) doi: 10.3390/jcm7090282
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Ersin Gül, Erik Bakkeren, Guillem Salazar, Yves Steiger, Andrew Abi Younes, Melanie Clerc, Philipp Christen, Stefan A. Fattinger, Bidong D. Nguyen, Patrick Kiefer, Emma Slack, Martin Ackermann, Julia A. Vorholt, Shinichi Sunagawa, Médéric Diard, Wolf-Dietrich Hardt, Sam Paul Brown. The microbiota conditions a gut milieu that selects for wild-type Salmonella Typhimurium virulencePLOS Biology 2023; 21(8) doi: 10.1371/journal.pbio.3002253
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Jing Du, Zhen Wang, Yankuo Xing, Xianggang Gao, Zhichuang Lu, Duohui Li, Jiashen Tian. Long-Read Sequencing Revealing the Effectiveness of Captive Breeding Strategy for Improving the Gut Microbiota of Spotted Seal (Phoca largha)Marine Biotechnology 2025; 27(1) doi: 10.1007/s10126-024-10397-7
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N. V. Sturov, S. V. Popov, V. A. Zhukov. Pathogenetic Role and Possibilities for Correction of Gut Microbiota Disorders in Urinary Tract InfectionsAntibiotics and Chemotherapy 2021; 66(7-8) doi: 10.37489/0235-2990-2021-66-7-8-100-108
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Yue-Bei Luo, Yangtengyu Liu, Qiuxiang Li, Huiqian Duan, Zhaohui Luo, Huan Yang, Liqun Xu. Integrating 16S RRNA gene sequencing and metabolomics to evaluate the association between gut microbiota and serum metabolites in patients with myositisJournal of Applied Microbiology 2022; 133(4) doi: 10.1111/jam.15724
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Hao Li, Shuyu Liu, Keke Zhang, Xiangjia Zhu, Jinhui Dai, Yi Lu. Gut microbiome and plasma metabolome alterations in myopic miceFrontiers in Microbiology 2023; 14 doi: 10.3389/fmicb.2023.1251243
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Toral Manvar, Vijay Lakhujani. Encyclopedia of Bioinformatics and Computational Biology2019;  doi: 10.1016/B978-0-12-809633-8.20503-7
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Zhendong Zhang, Bin Cai, Yanzhuan Sun, Haiyan Deng, Hongwei Wang, Zengyong Qiao. Alteration of the gut microbiota and metabolite phenylacetylglutamine in patients with severe chronic heart failureFrontiers in Cardiovascular Medicine 2023; 9 doi: 10.3389/fcvm.2022.1076806
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Peter Christopher Konturek, Igor Alexander Harsch, Kathrin Konturek, Monic Schink, Thomas Konturek, Markus F. Neurath, Yurdaguel Zopf. Gut–Liver Axis: How Do Gut Bacteria Influence the Liver?Medical Sciences 2018; 6(3) doi: 10.3390/medsci6030079
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Ellen Johanne Vara, Jørgen Valeur, Trygve Hausken, Gülen Arslan Lied. Extra-intestinal symptoms in patients with irritable bowel syndrome: related to high total IgE levels and atopic sensitization?Scandinavian Journal of Gastroenterology 2016; 51(8) doi: 10.3109/00365521.2016.1157890
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Sijing Liu, Zhengyue Liao, Yixin Liu, Jing Bai, Zhangjun Huang, Xiaonian Cao, Caihong Shen, Shuqi Niu, Jinlin Guo. The ethanol extract derived from mung bean reduced immune suppression, intestinal injury, and disruptions in gut microbiota caused by cyclophosphamide in miceJournal of the Science of Food and Agriculture 2026; 106(3) doi: 10.1002/jsfa.70265
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Antonio D’Ambrosio, Annamaria Altomare, Tamara Boscarino, Manuele Gori, Paola Balestrieri, Lorenza Putignani, Federica Del Chierico, Simone Carotti, Michele Cicala, Michele Pier Luca Guarino, Vincenzo Piemonte. Mathematical Modeling of Vedolizumab Treatment’s Effect on Microbiota and Intestinal Permeability in Inflammatory Bowel Disease PatientsBioengineering 2024; 11(7) doi: 10.3390/bioengineering11070710
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Erica Jennison, Christopher D. Byrne. The role of the gut microbiome and diet in the pathogenesis of non-alcoholic fatty liver diseaseClinical and Molecular Hepatology 2021; 27(1) doi: 10.3350/cmh.2020.0129
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Effrosyni Louka, Vassiliki Lila Koumandou. The Emerging Role of Human Gut Bacteria Extracellular Vesicles in Mental Disorders and Developing New PharmaceuticalsCurrent Issues in Molecular Biology 2024; 46(5) doi: 10.3390/cimb46050286
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Diego Domínguez-Balmaseda, Guillermo García-Pérez-de-Sevilla. The Relationship between the Gut Microbiota and Exercise: A Narrative ReviewHygiene 2022; 2(4) doi: 10.3390/hygiene2040014
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Xuemei Li, Qiang Yuan, Hui Huang, Li Wang. Gut microbiota in irritable bowel syndrome: a narrative review of mechanisms and microbiome-based therapiesFrontiers in Immunology 2025; 16 doi: 10.3389/fimmu.2025.1695321
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Safa Beydoun, Ali M. Fardous, Michael M. Saruna, Ali G. Beydoun, Johnathan A. Sorge, Hongzhi Ma, Ghada Aoun, Archana Unnikrishnan, Diane C. Cabelof, Ahmad R. Heydari. Succinylsulfathiazole modulates the mTOR signaling pathway in the liver of c57BL/6 mice via a folate independent mechanismExperimental Gerontology 2021; 150 doi: 10.1016/j.exger.2021.111387
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Jiazhen Zheng, Ziyi Li, Hengyi Xu. Intestinal Microbiotas and Alcoholic Hepatitis: Pathogenesis and Therapeutic ValueInternational Journal of Molecular Sciences 2023; 24(19) doi: 10.3390/ijms241914809
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Balaprasad Ankamwar (NanoBA), Rachana Yadwade. A review: non-antibacterial, non-antifungal and non-anticancer properties of nanoparticles the forgotten paradigmNano Express 2021; 2(1) doi: 10.1088/2632-959X/abe473
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Gauri Garg Dhingra, Roshan Kumar, Utkarsh Sood, Princy Hira, Jasvinder Kaur, Rup Lal. Role of Microbes in Sustainable Development2023;  doi: 10.1007/978-981-99-3126-2_13
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Catarina Magalhães, Margarida Lima, Patrick Trieu-Cuot, Paula Ferreira. To give or not to give antibiotics is not the only questionThe Lancet Infectious Diseases 2021; 21(7) doi: 10.1016/S1473-3099(20)30602-2
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Nour Abou Izzeddine, Kawsar Ahmad, Christine Bacha, Maria Jabbour, Mouin Najjar, Sethrida Salhab, Hilda E. Ghadieh, Amjad Kanaan, Sami Azar, Ziad Abi Khattar, Frederic Harb. The microbial guardians: Unveiling the role of gut microbiota in shaping neurodegenerative diseaseIBRO Neuroscience Reports 2025; 19 doi: 10.1016/j.ibneur.2025.05.014
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Ignazio Maniscalco, Piotr Bartochowski, Vittoria Priori, Sidonia Paula Iancau, Michele De Francesco, Marco Innamorati, Natalia Jagodzinska, Giancarlo Giupponi, Luca Masucci, Andreas Conca, Magdalena Mroczek. The Effects of Fecal Microbial Transplantation on the Symptoms in Autism Spectrum Disorder, Gut Microbiota and Metabolites: A Scoping ReviewMicroorganisms 2025; 13(6) doi: 10.3390/microorganisms13061290
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Bhupinder Kapoor, Monica Gulati, Reena Gupta, Rajeev K. Singla. Microbiota dysbiosis and myasthenia gravis: Do all roads lead to Rome?Autoimmunity Reviews 2023; 22(5) doi: 10.1016/j.autrev.2023.103313
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Edeildo Ferreira da Silva-Júnior, Thiago Mendonça de Aquino. Fundamentals of Drug and Non-Drug Interactions2025;  doi: 10.1007/978-3-031-80107-5_12
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Boyeon Kim, Jiwon Lee, Eun Sung Jung, Sunyoung Lee, Dong Ho Suh, Yu Jin Park, Jin Kim, Jung-Myun Kwak, Soohyeon Lee. The impact of a modified microbiota-accessible carbohydrate diet on gut microbiome and clinical symptoms in colorectal cancer patients following surgical resectionFrontiers in Microbiology 2024; 15 doi: 10.3389/fmicb.2024.1282932
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S. Zhang, T. Wang, D. Zhang, X. Wang, Z. Zhang, C. Lim, S. Lee. Probiotic characterization of Lactiplantibacillus plantarum HOM3204 and its restoration effect on antibiotic-induced dysbiosis in miceLetters in Applied Microbiology 2022; 74(6) doi: 10.1111/lam.13683
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Karen Bisschop, Hylke H. Kortenbosch, Timo J. B. van Eldijk, Cyrus A. Mallon, Joana F. Salles, Dries Bonte, Rampal S. Etienne. Microbiome Heritability and Its Role in Adaptation of Hosts to Novel ResourcesFrontiers in Microbiology 2022; 13 doi: 10.3389/fmicb.2022.703183
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Yuta KINOSHITA, Hidekazu NIWA, Takanori UENO. Minimal disruption of equine gut microbiota by intravenous cephalothin treatmentJournal of Veterinary Medical Science 2025; 87(6) doi: 10.1292/jvms.25-0105
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Tao Yang, Jasenka Zubcevic. Gut–Brain Axis in Regulation of Blood PressureFrontiers in Physiology 2017; 8 doi: 10.3389/fphys.2017.00845
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Bo Zhou, Kai Chen, Haiyan Gong, Liyuan Zhao, Xinfeng Xing, Hongde Su, Yu Zhang. Analysis of gut microbiota in rats with bile duct obstruction after biliary drainageMicrobial Pathogenesis 2023; 180 doi: 10.1016/j.micpath.2023.106149
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Pintu Choudhary, Deepika Kathuria, Shweta Suri, Adity Bahndral, A. Kanthi Naveen. Probiotics- its functions and influence on the ageing process: A comprehensive reviewFood Bioscience 2023; 52 doi: 10.1016/j.fbio.2023.102389
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Alex Peh, Joanne A. O’Donnell, Brad R.S. Broughton, Francine Z. Marques. Gut Microbiota and Their Metabolites in Stroke: A Double-Edged SwordStroke 2022; 53(5) doi: 10.1161/STROKEAHA.121.036800
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Amrita Banerjee, Weilin L. Shelver. Micro- and Nanoplastic-Mediated Pathophysiological Changes in Rodents, Rabbits, and Chickens: A ReviewJournal of Food Protection 2021; 84(9) doi: 10.4315/JFP-21-117
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John Ferguson, Brian Ravert, Michael Gailey. Aspiration: /aspə’rāSH(ə)n/: Noun: An Ambiguous Term Used for a Diagnosis of UncertaintyClinical Pulmonary Medicine 2018; 25(5) doi: 10.1097/CPM.0000000000000277
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Mingchen Yao, Yaqi Qu, Yalin Zheng, Hao Guo. The effect of exercise on depression and gut microbiota: Possible mechanismsBrain Research Bulletin 2025; 220 doi: 10.1016/j.brainresbull.2024.111130
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C.M. Mosterd, M. Kanbay, B.J.H. van den Born, D.H. van Raalte, E. Rampanelli. Intestinal microbiota and diabetic kidney diseases: the Role of microbiota and derived metabolites inmodulation of renal inflammation and disease progressionBest Practice & Research Clinical Endocrinology & Metabolism 2021; 35(3) doi: 10.1016/j.beem.2021.101484
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Ayman Mahran, Amal Hosni, Ahmed A. A. Mageed. Intestinal Fatty Acid-binding Protein in Patients with Psoriasis: A Marker of Impaired Intestinal Permeability Barrier and its Relation to Demographic Data and Clinical CharacteristicsJournal of Dermatology and Dermatologic Surgery 2023; 27(2) doi: 10.4103/jdds.jdds_80_22
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Muthukumaran Jayachandran, Sunil Christudas, Xuchu Zheng, Baojun Xu. Dietary fiber konjac glucomannan exerts an antidiabetic effect via inhibiting lipid absorption and regulation of PPAR-γ and gut microbiomeFood Chemistry 2023; 403 doi: 10.1016/j.foodchem.2022.134336
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Dionisia Fontanals, Alex Larruzea, Isabel Sanfeliu. Direct identification of Ruminococcus gnavus by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF MS) on a positive anaerobic blood culture bottleAnaerobe 2018; 54 doi: 10.1016/j.anaerobe.2018.07.009
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Shivani Popli, Prarabdh C. Badgujar, Tripti Agarwal, Bharat Bhushan, Vijendra Mishra. Persistent organic pollutants in foods, their interplay with gut microbiota and resultant toxicityScience of The Total Environment 2022; 832 doi: 10.1016/j.scitotenv.2022.155084
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Sarah de Oliveira Rodrigues, Alice Garcia Pádua, Clara Mariana Gonçalves Lima, Rebecca de Oliveira Rodrigues, Isabela Bacelar de Assis, Jorge Pamplona Pagnossa. Gut-brain axis as a key aspect of clinical conditionsInternational Journal of Family & Community Medicine 2022; 6(5) doi: 10.15406/ijfcm.2022.06.00291
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Selvaraj Jayaraman, Shiny Paul. Gut Microbiome and Brain Ageing2024;  doi: 10.1007/978-981-99-8803-7_9
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Helal F Hetta, Rehab Ahmed, Yasmin N Ramadan, Hayam Fathy, Mohammed Khorshid, Mohamed M Mabrouk, Mai Hashem. Gut virome: New key players in the pathogenesis of inflammatory bowel diseaseWorld Journal of Methodology 2025; 15(2): 92592 doi: 10.5662/wjm.v15.i2.92592
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Yuanyuan Zhang, Tianyu Wang, Zhongqi Wan, Jianhao Bai, Yawen Xue, Rushun Dai, Minli Wang, Qing Peng. Alterations of the intestinal microbiota in age-related macular degenerationFrontiers in Microbiology 2023; 14 doi: 10.3389/fmicb.2023.1069325
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Jennifer Mepham, Taylor Nelles‐McGee, Krysta Andrews, Andrea Gonzalez. Exploring the effect of prenatal maternal stress on the microbiomes of mothers and infants: A systematic reviewDevelopmental Psychobiology 2023; 65(7) doi: 10.1002/dev.22424
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Non-pharmacological Interventions for Age-Related Neuropsychiatric DisordersProgress in Brain Research 2025; 298 doi: 10.1016/bs.pbr.2025.08.019
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Federica Saponaro, Andrea Bertolini, Riccardo Baragatti, Leonardo Galfo, Grazia Chiellini, Alessandro Saba, Giuseppina D’Urso. Myokines and Microbiota: New Perspectives in the Endocrine Muscle–Gut AxisNutrients 2024; 16(23) doi: 10.3390/nu16234032
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Volodymyr Hryn, Yuriy Kostylenkо, Oleksandr Maksymenko, Nataliia Svintsytska, Olesia Tykhonova, Yana Tarasenko, Denys Prysyazhnyi. GENERAL CHARACTERISTICS OF LYMPHOID TISSUE ASSOCIATED WITH THE MUCOUS MEMBRANES OF THE DIGESTIVE SYSTEMEastern Ukrainian Medical Journal 2025; 13(2) doi: 10.21272/eumj.2025;13(2):385-396
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Jan Kevin Maerz, Alex Steimle, Anna Lange, Annika Bender, Birgit Fehrenbacher, Julia-Stefanie Frick. Outer membrane vesicles blebbing contributes toB. vulgatusmpk-mediated immune response silencingGut Microbes 2018; 9(1) doi: 10.1080/19490976.2017.1344810
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Piraya Chatthanathon, Asada Leelahavanichkul, Thanya Cheibchalard, Alisa Wilantho, Nattiya Hirankarn, Naraporn Somboonna. Comparative time-series analyses of gut microbiome profiles in genetically and chemically induced lupus-prone mice and the impacts of fecal transplantationScientific Reports 2024; 14(1) doi: 10.1038/s41598-024-77672-4
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Yenifer Olivo-Martínez, Manel Bosch, Josefa Badia, Laura Baldomà. Modulation of the Intestinal Barrier Integrity and Repair by Microbiota Extracellular Vesicles through the Differential Regulation of Trefoil Factor 3 in LS174T Goblet CellsNutrients 2023; 15(11) doi: 10.3390/nu15112437
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Julio César Muro-Valdez, Alejandra Meza-Rios, Blanca Rosa Aguilar-Uscanga, Rocio Ivette Lopez-Roa, Eunice Medina-Díaz, Esmeralda Marisol Franco-Torres, Adelaida Sara Minia Zepeda-Morales. Breastfeeding-Related Health Benefits in Children and Mothers: Vital Organs PerspectiveMedicina 2023; 59(9) doi: 10.3390/medicina59091535
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Alejandro Jiménez-González, Sebastian Cristian Treitli, Priscila Peña-Diaz, Anna Janovská, Vladimír Beneš, Petr Žáček, Vladimír Hampl. Comprehensive analysis of the microbial consortium in the culture of flagellate Monocercomonoides exilisEnvironmental Microbiome 2025; 20(1) doi: 10.1186/s40793-025-00758-7
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Estefanía Garibay-Valdez, Francesco Cicala, Marcel Martinez-Porchas, Ricardo Gómez-Reyes, Francisco Vargas-Albores, Teresa Gollas-Galván, Luis Rafael Martínez-Córdova, Kadiya Calderón. Longitudinal variations in the gastrointestinal microbiome of the white shrimp,Litopenaeus vannameiPeerJ 2021; 9 doi: 10.7717/peerj.11827
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Piero Portincasa, Leonilde Bonfrate, Mohamad Khalil, Maria De Angelis, Francesco Maria Calabrese, Mauro D’Amato, David Q.-H. Wang, Agostino Di Ciaula. Intestinal Barrier and Permeability in Health, Obesity and NAFLDBiomedicines 2021; 10(1) doi: 10.3390/biomedicines10010083
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Emmanouil Mavrogeorgis, Sophie Valkenburg, Justyna Siwy, Agnieszka Latosinska, Griet Glorieux, Harald Mischak, Joachim Jankowski. Integration of Urinary Peptidome and Fecal Microbiome to Explore Patient Clustering in Chronic Kidney DiseaseProteomes 2024; 12(2) doi: 10.3390/proteomes12020011
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Morgan Bragg, Elizabeth W. Freeman, Haw Chuan Lim, Nucharin Songsasen, Carly R. Muletz-Wolz. Gut Microbiomes Differ Among Dietary Types and Stool Consistency in the Captive Red Wolf (Canis rufus)Frontiers in Microbiology 2020; 11 doi: 10.3389/fmicb.2020.590212
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Hanrui Wang, Jiaxing Tian, Jia Mi. Clinical effectiveness of fecal microbial transplantation for metabolic syndrome: Advances in clinical efficacy and multi-omics researchCurrent Research in Microbial Sciences 2025; 9 doi: 10.1016/j.crmicr.2025.100415
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P. Thomson, P. Núñez, R. Quera, C. Bay. Gastrointestinal microbiome, what is behind faecal microbiota transplantation?New Microbes and New Infections 2021; 42 doi: 10.1016/j.nmni.2021.100898
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Congcong Gong, Chunwei Jiao, Huijia Liang, Yuxin Ma, Qingping Wu, Yizhen Xie. Exome-Based Amino Acid Optimization: A Dietary Strategy to Satisfy Human Nutritional Demands and Enhance Muscle Strength in Breast Tumor Mice Undergoing ChemotherapyJournal of Agricultural and Food Chemistry 2024; 72(13) doi: 10.1021/acs.jafc.3c07256
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Jin-A Lim, Jihye Cha, Soyoung Choi, Jae-Hwan Kim, Dahye Kim. Early Colonization of the Intestinal Microbiome of Neonatal Piglets Is Influenced by the Maternal MicrobiomeAnimals 2023; 13(21) doi: 10.3390/ani13213378
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Maja Hitl, Nebojša Kladar, Neda Gavarić, Biljana Božin. Rosmarinic Acid–Human Pharmacokinetics and Health BenefitsPlanta Medica 2021; 87(04) doi: 10.1055/a-1301-8648
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Microbial Metabolomics2025;  doi: 10.1007/978-981-96-4824-5_17
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Ruhina Afroz Patel, Archana N. Panche, Sanjay N. Harke. Gut microbiome-gut brain axis-depression: interconnectionThe World Journal of Biological Psychiatry 2025; 26(1) doi: 10.1080/15622975.2024.2436854
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Justin Gray, Baochuan Guo, Rebecca Bearden, Julie Manka. A fast, fully validated GC‐MS method using a simplified pretreatment for the quantification of short and branched chain fatty acids in human stoolJournal of Mass Spectrometry 2022; 57(4) doi: 10.1002/jms.4817
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Marlon H. Cardoso, Beatriz T. Meneguetti, Nelson G. Oliveira-Júnior, Maria L.R. Macedo, Octávio L. Franco. Antimicrobial peptide production in response to gut microbiota imbalancePeptides 2022; 157 doi: 10.1016/j.peptides.2022.170865
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Junjing Xue, Kolapo M. Ajuwon, Rejun Fang. Mechanistic insight into the gut microbiome and its interaction with host immunity and inflammationAnimal Nutrition 2020; 6(4) doi: 10.1016/j.aninu.2020.05.007
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Mahejibin Khan, Nidhi Sori. Microbiome-Gut-Brain Axis2022;  doi: 10.1007/978-981-16-1626-6_6
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Samjhana Pradhan, Cynthia Blanton, Javier Ochoa-Reparaz, Nirajan Bhattarai, Kavita Sharma. Herbs and Spices: Modulation of Gut Microbiota for Healthy AgingGastroenterology Insights 2024; 15(2) doi: 10.3390/gastroent15020032
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Nikolai Rakhilin, Aliesha Garrett, Chi-Yong Eom, Katherine Ramos Chavez, David M. Small, Andrea R. Daniel, Melanie M. Kaelberer, Menansili A. Mejooli, Qiang Huang, Shengli Ding, David G. Kirsch, Diego V. Bohórquez, Nozomi Nishimura, Bradley B. Barth, Xiling Shen. An intravital window to image the colon in real timeNature Communications 2019; 10(1) doi: 10.1038/s41467-019-13699-w
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Yanshan Ge, Xinhui Wang, Yali Guo, Junting Yan, Aliya Abuduwaili, Kasimujiang Aximujiang, Jie Yan, Minghua Wu. Gut microbiota influence tumor development and Alter interactions with the human immune systemJournal of Experimental & Clinical Cancer Research 2021; 40(1) doi: 10.1186/s13046-021-01845-6
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O. O. Hurenko, S. B. Drozdovska. INTESTINAL DYSBIOSIS AS A FACTOR IN THE DEVELOPMENT OF METABOLIC SYNDROME AND INSULIN RESISTANCE Bulletin of Problems Biology and Medicine 2021; 1(1) doi: 10.29254/2077-4214-2021-1-159-257-264
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Qian Chen, Demei Huang, Junling Liu, Nan Jia, Zherui Shen, Caixia Pei, Chen Chen, Yuhan Liu, Yilan Wang, Shihua Shi, Renxing Yi, Yacong He, Fei Wang, Zhenxing Wang. The gut microbiota in high-altitude medicine: intersection of hypoxic adaptation and disease managementFrontiers in Microbiology 2025; 16 doi: 10.3389/fmicb.2025.1705487
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Naeem Qusty, Anas Sarhan, Medhat Taha, Ahmed Alshanqiti, Albaraa Mohammed Almuteb , Aisha Tareq Alfaraidi , Hussein Ali Alkhairi, Manar Mohammed Alzahrani , Aishah Hanash A Alamry, Talal Qalil Bakheet Alomry, Omar Abdu Bannan, Mohammed Saeed Almaashi. The Role of Gut Microbiota in the Efficacy and Side Effect Profile of Biologic Therapies for Autoimmune DiseasesCureus 2024;  doi: 10.7759/cureus.71111
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Jimin Park, Ki Heon Nam, Bo Young Nam, Gyuri Kim, Hyoungnae Kim, Ki Uk Lee, Seok Cheon Song, Tae-Wook Nam, Woon-Ki Kim, Jung Tak Park, Tae-Hyun Yoo, Shin-Wook Kang, GwangPyo Ko, Seung Hyeok Han. Lactobacillus acidophilus KBL409 protects against kidney injury via improving mitochondrial function with chronic kidney diseaseEuropean Journal of Nutrition 2024; 63(6) doi: 10.1007/s00394-024-03408-9
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Junjun Ye, Zezhen Wu, Yifei Zhao, Shuo Zhang, Weiting Liu, Yu Su. Role of gut microbiota in the pathogenesis and treatment of diabetes mullites: Advanced research-based reviewFrontiers in Microbiology 2022; 13 doi: 10.3389/fmicb.2022.1029890
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Suthar Teerath Kumar, Yunpeng Zhang, Qi Zhang, Riaz Muhammad Azeem, Zhang Jing, Li Pan, Wu-Sheng Sun, Yuan Zhao, Shu-Min Zhang. Breed-specific differences of gut microbiota and metabolomic insights into fat deposition and meat quality in Chinese Songliao Black Pig and Large White × Landrace Pig BreedsBMC Microbiology 2025; 25(1) doi: 10.1186/s12866-025-04051-y
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Yu Zhang, Dong D. Wang. Gut microbiome in type 2 diabetes: insights from metagenomics, multi-omics, and diet–microbe interactionsGut Microbes 2026; 18(1) doi: 10.1080/19490976.2026.2644682
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Agnieszka Magryś, Mateusz Pawlik. Postbiotic Fractions of Probiotics Lactobacillus plantarum 299v and Lactobacillus rhamnosus GG Show Immune-Modulating EffectsCells 2023; 12(21) doi: 10.3390/cells12212538
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Yuko Shigeno, Haolin Zhang, Taihei Banno, Kento Usuda, Tomonori Nochi, Ryo Inoue, Gen Watanabe, Wanzhu Jin, Yoshimi Benno, Kentaro Nagaoka. Gut microbiota development in mice is affected by hydrogen peroxide produced from amino acid metabolism during lactationThe FASEB Journal 2019; 33(3) doi: 10.1096/fj.201801462R
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Samar Y Ahmad, James K Friel, Dylan S Mackay. Effect of sucralose and aspartame on glucose metabolism and gut hormonesNutrition Reviews 2020; 78(9) doi: 10.1093/nutrit/nuz099
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Meenakshi Kandpal, Omkar Indari, Budhadev Baral, Shweta Jakhmola, Deeksha Tiwari, Vasundhra Bhandari, Rajan Kumar Pandey, Kiran Bala, Avinash Sonawane, Hem Chandra Jha. Dysbiosis of Gut Microbiota from the Perspective of the Gut–Brain Axis: Role in the Provocation of Neurological DisordersMetabolites 2022; 12(11) doi: 10.3390/metabo12111064
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Tahli Singer-Englar, Gillian Barlow, Ruchi Mathur. Obesity, diabetes, and the gut microbiome: an updated reviewExpert Review of Gastroenterology & Hepatology 2019; 13(1) doi: 10.1080/17474124.2019.1543023
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Torsten P.M. Scheithauer, Geesje M. Dallinga-Thie, Willem M. de Vos, Max Nieuwdorp, Daniël H. van Raalte. Causality of small and large intestinal microbiota in weight regulation and insulin resistanceMolecular Metabolism 2016; 5(9) doi: 10.1016/j.molmet.2016.06.002
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Natalia Lucía Rukavina Mikusic, Nicolás Martín Kouyoumdzian, Marcelo Roberto Choi. Gut microbiota and chronic kidney disease: evidences and mechanisms that mediate a new communication in the gastrointestinal-renal axisPflügers Archiv - European Journal of Physiology 2020; 472(3) doi: 10.1007/s00424-020-02352-x
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Chen Zhou, Pengpeng Zhang, Yingzi Ming. Characteristics of Intestinal Flora in Patients With Schistosoma japonicum Infection Undergoing SplenectomyParasite Immunology 2025; 47(5) doi: 10.1111/pim.70008
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Bharti Verma, Nitish Kumar, Sumel Ashique, Biplab Debnath, Ashish Garg, Neeraj Mishra, Naheed Mojgani, Monika Kaurav, Madhu Gupta, Mithun Bhowmick, Farzad Taghizadeh-Hesary. Probiotics: An adjuvant treatment strategy for chronic respiratory diseasesRespiratory Medicine 2025; 247 doi: 10.1016/j.rmed.2025.108268
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Chi Huan Chang, Po Yun Teng, Tzu Tai Lee, Bi Yu. The effects of the supplementation of multi‐strain probiotics on intestinal microbiota, metabolites and inflammation of young SPF chickens challenged with Salmonella enterica subsp. entericaAnimal Science Journal 2019; 90(6) doi: 10.1111/asj.13205
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L. A. Firsova, M. M. Gurova, A. N. Zavyalova. Chronic kidney disease and comorbid diseases of gastrointestinal tractExperimental and Clinical Gastroenterology 2022; (1) doi: 10.31146/1682-8658-ecg-197-1-110-119
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Zahraa Al Bander, Marloes Dekker Nitert, Aya Mousa, Negar Naderpoor. The Gut Microbiota and Inflammation: An OverviewInternational Journal of Environmental Research and Public Health 2020; 17(20) doi: 10.3390/ijerph17207618
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Sana Janakat, Dana Al-Samman. The Effect of Boiled Oil (Olive Oil Produced using Boiled Olive Fruits) on Gut Microbiota in the RatThe Open Agriculture Journal 2024; 18(1) doi: 10.2174/0118743315319458240801055820
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Nina Seiwert, Daniel Heylmann, Solveig Hasselwander, Jörg Fahrer. Mechanism of colorectal carcinogenesis triggered by heme iron from red meatBiochimica et Biophysica Acta (BBA) - Reviews on Cancer 2020; 1873(1) doi: 10.1016/j.bbcan.2019.188334
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Allison Grech, Clare E Collins, Andrew Holmes, Ravin Lal, Kerith Duncanson, Rachael Taylor, Adrienne Gordon. Maternal exposures and the infant gut microbiome: a systematic review with meta-analysisGut Microbes 2021; 13(1) doi: 10.1080/19490976.2021.1897210
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Despoina Gyriki, Christos Nikolaidis, Elisavet Stavropoulou, Ioanna Bezirtzoglou, Christina Tsigalou, Stergios Vradelis, Eugenia Bezirtzoglou. Exploring the Gut Microbiome’s Role in Inflammatory Bowel Disease: Insights and InterventionsJournal of Personalized Medicine 2024; 14(5) doi: 10.3390/jpm14050507
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Joseph A. Ayariga, Iddrisu Ibrahim, Logan Gildea, James Abugri, Robert Villafane. Microbiota in a long survival discourse with the human hostArchives of Microbiology 2023; 205(1) doi: 10.1007/s00203-022-03342-6
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Jayasree Saha, Ritobrata Goswami. Modulation of Innate Immunity by Short-Chain Fatty Acids in Probiotic and Fecal Microbiota Transplantation Therapies for the Treatment of Colon DisordersProbiotics and Antimicrobial Proteins 2026; 18(3) doi: 10.1007/s12602-025-10807-9
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Hamide Kaya, Eyyüp Kaya. Mikrobiyotanın Enfeksiyon Hastalıklarındaki RolüBlack Sea Journal of Health Science 2023; 6(3) doi: 10.19127/bshealthscience.1291875
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Nicholas J Timpson, Kaitlin H Wade, Madeleine L Smith, Lucy J Goudswaard, Naveed Sattar, Dimitri J Pournaras, Laura J Corbin. New insights into understanding obesity: from measures to mechanismsBMJ Medicine 2024; 3(1) doi: 10.1136/bmjmed-2023-000787
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Maximilian Hohmann, Denis Iliasov, Martin Larralde, Widya Johannes, Klaus-Peter Janßen, Georg Zeller, Thorsten Mascher, Tobias A. M. Gulder. Heterologous Expression of a Cryptic BGC from Bilophila sp. Provides Access to a Novel Family of Antibacterial ThiazolesACS Synthetic Biology 2025; 14(3) doi: 10.1021/acssynbio.5c00042
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Sandra Valencia, Martha Zuluaga, María Cristina Florian Pérez, Kevin Fernando Montoya-Quintero, Mariana S. Candamil-Cortés, Sebastian Robledo. Human Gut Microbiome: A Connecting Organ Between Nutrition, Metabolism, and HealthInternational Journal of Molecular Sciences 2025; 26(9) doi: 10.3390/ijms26094112
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Xin Zhang, Baoliang Guo, Yuwei Feng, Hong Cao, Dan Li, Yingyu Wang, Ji’ai Yan, Ju Yang, Jing Sun, Yiran Liu, Yanping Xia, Liujing Zhang, Lin Jiang, Feng Zhang. Repression of Gut Microbiota-Derived GM3 by Insoluble Fiber Attenuates the Colorectal Tumorigenesis in miceCurrent Research in Microbial Sciences 2026;  doi: 10.1016/j.crmicr.2026.100570
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Lu Wang, Shiqi Wang, Qing Zhang, Chengqi He, Chenying Fu, Quan Wei. The role of the gut microbiota in health and cardiovascular diseasesMolecular Biomedicine 2022; 3(1) doi: 10.1186/s43556-022-00091-2
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Pradeep Kumar, Anil Kumar, Virendra Kumar. Role of Microbiota‐Derived Metabolites in Prostate Cancer Inflammation and ProgressionCell Biochemistry and Function 2025; 43(2) doi: 10.1002/cbf.70050
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Jia Xu, Yang Wei, Yi Huang, Xinlin Wei. Regulatory Effects and Molecular Mechanisms of Tea and Its Active Compounds on Nonalcoholic Fatty Liver DiseaseJournal of Agricultural and Food Chemistry 2023; 71(7) doi: 10.1021/acs.jafc.2c07702
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Chiara Argentini, Gabriele Andrea Lugli, Chiara Tarracchini, Federico Fontana, Leonardo Mancabelli, Alice Viappiani, Rosaria Anzalone, Leonora Angelini, Giulia Alessandri, Giulia Longhi, Massimiliano G. Bianchi, Giuseppe Taurino, Ovidio Bussolati, Christian Milani, Douwe van Sinderen, Francesca Turroni, Marco Ventura. Genomic and ecological approaches to identify the Bifidobacterium breve prototype of the healthy human gut microbiotaFrontiers in Microbiology 2024; 15 doi: 10.3389/fmicb.2024.1349391
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Shan-shan Xu, Qi-liang Lai, Zeng-zhi Liu, Ying Xu. Paracoccus onchidii sp. nov., a moderately halophilic bacterium isolated from a marine invertebrate from the South China SeaAntonie van Leeuwenhoek 2023; 116(8) doi: 10.1007/s10482-023-01848-7
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Wojciech Kazura, Katarzyna Michalczyk, Dominika Stygar. The Relationship between the Source of Dietary Animal Fats and Proteins and the Gut Microbiota Condition and Obesity in HumansNutrients 2023; 15(14) doi: 10.3390/nu15143082
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Agata Binienda, Agata Twardowska, Adam Makaro, Maciej Salaga. Dietary Carbohydrates and Lipids in the Pathogenesis of Leaky Gut Syndrome: An OverviewInternational Journal of Molecular Sciences 2020; 21(21) doi: 10.3390/ijms21218368
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Chiara Argentini, Federico Fontana, Giulia Alessandri, Gabriele Andrea Lugli, Leonardo Mancabelli, Maria Cristina Ossiprandi, Douwe van Sinderen, Marco Ventura, Christian Milani, Francesca Turroni, Paolo Visca. Evaluation of Modulatory Activities of Lactobacillus crispatus Strains in the Context of the Vaginal MicrobiotaMicrobiology Spectrum 2022; 10(2) doi: 10.1128/spectrum.02733-21
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Abigail Marsh, Sophie Rindfleish, Kalina Bennett, Anthony Croft, Veronique Chachay. Outcomes of dietary management approaches in active ulcerative colitis: A systematic reviewClinical Nutrition 2022; 41(2) doi: 10.1016/j.clnu.2021.12.007
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Qian Yang, Shiqi Wang, Chenyao Huang, Rui Shao, Yu Wang, Xin Zhao. Medicinal and Edible Plants for the Management of Inflammatory Bowel Disease: Synergistic Modulation of the Microbiota–Metabolite–Immune AxisThe American Journal of Chinese Medicine 2026; 54(03) doi: 10.1142/S0192415X26500291
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Petra Videnska, Kristyna Smerkova, Barbora Zwinsova, Vlad Popovici, Lenka Micenkova, Karel Sedlar, Eva Budinska. Stool sampling and DNA isolation kits affect DNA quality and bacterial composition following 16S rRNA gene sequencing using MiSeq Illumina platformScientific Reports 2019; 9(1) doi: 10.1038/s41598-019-49520-3
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Tao Zuo, Siew C. Ng. The Gut Microbiota in the Pathogenesis and Therapeutics of Inflammatory Bowel DiseaseFrontiers in Microbiology 2018; 9 doi: 10.3389/fmicb.2018.02247
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Halle J. Kincaid, Ravinder Nagpal, Hariom Yadav. Microbiome‐immune‐metabolic axis in the epidemic of childhood obesity: Evidence and opportunitiesObesity Reviews 2020; 21(2) doi: 10.1111/obr.12963
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Maryam Dadar, Youcef Shahali, Naheed Mojgani. Probiotic Bacteria and Postbiotic Metabolites: Role in Animal and Human HealthMicroorganisms for Sustainability 2021; 2 doi: 10.1007/978-981-16-0223-8_13
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Lei Zhou, Sheng-Zhi Chen, Yuan-Yuan Li, Rong-Yue Xue, Xu Duan, Xin-Ying Lin, Shan Chen, Dongmei Zhou, Hong-Bo Li. Gut Dysbiosis Exacerbates Intestinal Absorption of Cadmium and Arsenic from Cocontaminated Rice in Mice Due to Impaired Intestinal Barrier FunctionsEnvironmental Science & Technology 2025; 59(7) doi: 10.1021/acs.est.5c00817
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Susan Mills, R. Paul Ross, Colin Hill. Bacteriocins and bacteriophage; a narrow-minded approach to food and gut microbiologyFEMS Microbiology Reviews 2017; 41(Supp_1) doi: 10.1093/femsre/fux022
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Bobbi Laing, Matthew P. G. Barnett, Gareth Marlow, Noha Ahmed Nasef, Lynnette R. Ferguson. An update on the role of gut microbiota in chronic inflammatory diseases, and potential therapeutic targetsExpert Review of Gastroenterology & Hepatology 2018; 12(10) doi: 10.1080/17474124.2018.1505497
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Susan Westfall, Nikita Lomis, Satya Prakash. Ferulic Acid Produced by Lactobacillus fermentum Influences Developmental Growth Through a dTOR-Mediated MechanismMolecular Biotechnology 2019; 61(1) doi: 10.1007/s12033-018-0119-y
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Endang Sutriswati Rahayu, Tyas Utami, Mariyatun Mariyatun, Pratama Nur Hasan, Rafli Zulfa Kamil, Ryan Haryo Setyawan, Fathyah Hanum Pamungkaningtyas, Iskandar Azmy Harahap, Devin Varian Wiryohanjoyo, Putrika Citta Pramesi, Muhammad Nur Cahyanto, I Nengah Sujaya, Mohammad Juffrie. Gut microbiota profile in healthy IndonesiansWorld Journal of Gastroenterology 2019; 25(12): 1478-1491 doi: 10.3748/wjg.v25.i12.1478
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Abhiram Kumar, Chhavi Dhiman, Kumar Pranav Narayan, Madhaw Kumar, Mani Sharma. Spatially Variable Genes in CancerAdvances in Medical Diagnosis, Treatment, and Care 2024;  doi: 10.4018/979-8-3693-7728-4.ch007
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Zeyneb Hitache, Sam Al-Dalali, Hairun Pei, Xueli Cao. Review of the Health Benefits of Cereals and Pseudocereals on Human Gut MicrobiotaFood and Bioprocess Technology 2023; 16(11) doi: 10.1007/s11947-023-03069-2
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Lukman Iddrisu, Felix Danso, Kit-Leong Cheong, Zhijia Fang, Saiyi Zhong. Polysaccharides as Protective Agents against Heavy Metal ToxicityFoods 2024; 13(6) doi: 10.3390/foods13060853
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Daria V. Smirnova, Ljubov V. Zalomova, Angelika V. Zagainova, Valentin V. Makarov, Ludmila M. Mezhevikina, Eugeny E. Fesenko, Sergey M. Yudin. Cryopreservation of the human gut microbiota: Current state and perspectivesInternational Journal of Medical Microbiology 2019; 309(5) doi: 10.1016/j.ijmm.2019.06.001
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Yanna Niu, Yaochen Zhang, Keyi Fan, Jialin Hou, Liu Liu, Heyi Zhang, Xinlei Geng, Xiyue Ma, Shilei Lin, Meilin Guo, Xiaofeng Li, Shengxiao Zhang. Genetically predicted the causal relationship between gut microbiota and the risk of polymyositis/dermatomyositis: a Mendelian randomization analysisFrontiers in Microbiology 2024; 15 doi: 10.3389/fmicb.2024.1409497
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Jun Liu, Mingjuan Wu, Jingxin He, Chengju Xiao, Yunxia Xue, Ting Fu, Cuipei Lin, Dong Dong, Zhijie Li. Antibiotic-Induced Dysbiosis of Gut Microbiota Impairs Corneal Nerve Regeneration by Affecting CCR2-Negative Macrophage DistributionThe American Journal of Pathology 2018; 188(12) doi: 10.1016/j.ajpath.2018.08.009
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Zheng Zhu, Yu-Min Xu, Jun-Han Liang, Wei Huang, Jin-Ding Chen, Si-Ting Wu, Xiao-Hong Huang, You-Hua Huang, Xiao-Yang Zhang, Hong-Yan Sun, Qi-Wei Qin. Relationship of environmental factors in pond water and dynamic changes of gut microbes of sea bass Lateolabrax japonicusFrontiers in Microbiology 2023; 14 doi: 10.3389/fmicb.2023.1086471
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Anuupama Suchiita, Navya Gupta, Kajal Nandi, Subhash Sonkar, Lal Chandra, Jiong Yu. Harmony Within: Unravelling the Microbiome–Immune System Symbiosis for HealthAdvanced Gut & Microbiome Research 2025; 2025(1) doi: 10.1155/agm3/9927379
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Han Xiao, Sona Kang. The Role of the Gut Microbiome in Energy Balance With a Focus on the Gut-Adipose Tissue AxisFrontiers in Genetics 2020; 11 doi: 10.3389/fgene.2020.00297
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Han Gao, Daohua Zhuang, Hong Zhou, Qian Su, Xintong Hu, Yuan Wang, Wandong Bao, Lei Zhu, Jotham Suez. A comprehensive analysis of human gut microbial biosynthesis gene clusters unveiling the dominant role of Paenibacillus mSystems 2025; 10(7) doi: 10.1128/msystems.00610-25
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Reece McCoy, Sophie Oldroyd, Woojin Yang, Kaixin Wang, Darius Hoven, David Bulmer, Matthias Zilbauer, Róisín M. Owens. In Vitro Models for Investigating Intestinal Host–Pathogen InteractionsAdvanced Science 2024; 11(8) doi: 10.1002/advs.202306727
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Rizwan Ahamad, Asad Ali, Priya Manna, Neha Quadri, Zuber Khan, Radheshyam Pal, Mohammad Muztaba, Shakira Ghazanfar, Anas Islam, Asif Iqbal, Sumel Ashique. Stem Cell Therapeutics2025;  doi: 10.1002/9781394313785.ch10
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Guowei Chen, Zixin Yang, Chunting Cao, Xue Xiao, Yadong Huang, Lingmin Tian, Weibin Bai. Subacute safety assessment of recombinant Lactococcus lactis on the gut microbiota of male Sprague–Dawley ratsJournal of the Science of Food and Agriculture 2021; 101(14) doi: 10.1002/jsfa.11231
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Marzieh Daniali, Shekoufeh Nikfar, Mohammad Abdollahi. Antibiotic resistance propagation through probioticsExpert Opinion on Drug Metabolism & Toxicology 2020; 16(12) doi: 10.1080/17425255.2020.1825682
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Marina Pérez, Berta Buey, Pilar Corral, David Giraldos, Eva Latorre. Microbiota-Derived Short-Chain Fatty Acids Boost Antitumoral Natural Killer Cell ActivityJournal of Clinical Medicine 2024; 13(13) doi: 10.3390/jcm13133885
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Wanyi Zhou, Wenyang Tao, Mingzhe Wang, Wei Liu, Jianrong Xing, Ying Yang. Dendrobium officinale Xianhu 2 polysaccharide helps forming a healthy gut microbiota and improving host immune system: An in vitro and in vivo studyFood Chemistry 2023; 401 doi: 10.1016/j.foodchem.2022.134211
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Luca Puce, Jarrad Hampton-Marcell, Khaled Trabelsi, Achraf Ammar, Hamdi Chtourou, Ayoub Boulares, Lucio Marinelli, Laura Mori, Filippo Cotellessa, Antonio Currà, Carlo Trompetto, Nicola Luigi Bragazzi. Swimming and the human microbiome at the intersection of sports, clinical, and environmental sciences: A scoping review of the literatureFrontiers in Microbiology 2022; 13 doi: 10.3389/fmicb.2022.984867
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Roman Maslennikov, Elena Poluektova, Oxana Zolnikova, Alla Sedova, Anastasia Kurbatova, Yulia Shulpekova, Natyia Dzhakhaya, Svetlana Kardasheva, Maria Nadinskaia, Elena Bueverova, Vladimir Nechaev, Anna Karchevskaya, Vladimir Ivashkin. Gut Microbiota and Bacterial Translocation in the Pathogenesis of Liver FibrosisInternational Journal of Molecular Sciences 2023; 24(22) doi: 10.3390/ijms242216502
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Chiara-Maria Homann, Connor A. J. Rossel, Sara Dizzell, Liene Bervoets, Julia Simioni, Jenifer Li, Elizabeth Gunn, Michael G. Surette, Russell J. de Souza, Monique Mommers, Eileen K. Hutton, Katherine M. Morrison, John Penders, Niels van Best, Jennifer C. Stearns. Infants’ First Solid Foods: Impact on Gut Microbiota Development in Two Intercontinental CohortsNutrients 2021; 13(8) doi: 10.3390/nu13082639
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Jing Ouyang, Jiangyu Yan, Xin Zhou, Stéphane Isnard, Vijay Harypursat, Hongjuan Cui, Jean-Pierre Routy, Yaokai Chen. Relevance of biomarkers indicating gut damage and microbial translocation in people living with HIVFrontiers in Immunology 2023; 14 doi: 10.3389/fimmu.2023.1173956
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Alvaro Ferreira-Lazarte, F. Javier Moreno, Mar Villamiel. Bringing the digestibility of prebiotics into focus: update of carbohydrate digestion modelsCritical Reviews in Food Science and Nutrition 2021; 61(19) doi: 10.1080/10408398.2020.1798344
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Keumhan Noh, You Ra Kang, Mahesh Raj Nepal, Rajina Shakya, Mi Jeong Kang, Wonku Kang, Sangkyu Lee, Hye Gwang Jeong, Tae Cheon Jeong. Impact of gut microbiota on drug metabolism: an update for safe and effective use of drugsArchives of Pharmacal Research 2017; 40(12) doi: 10.1007/s12272-017-0986-y
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Stelios F. Assimakopoulos, Christos Triantos, Konstantinos Thomopoulos, Fotini Fligou, Ioannis Maroulis, Markos Marangos, Charalambos A. Gogos. Gut-origin sepsis in the critically ill patient: pathophysiology and treatmentInfection 2018; 46(6) doi: 10.1007/s15010-018-1178-5
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Kun Wang, Jingjing Zhang, Yihao Zhang, Junze Xue, He Wang, Xiaojie Tan, Xuelong Jiao, Haitao Jiang. The recovery of intestinal barrier function and changes in oral microbiota after radiation therapy injuryFrontiers in Cellular and Infection Microbiology 2024; 13 doi: 10.3389/fcimb.2023.1288666
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Tiziana LARUSSA, Ludovico ABENAVOLI, Giulia FABIANO, Maria A. MANCUSO, Natale POLIMENI, Dan L. DUMITRASCU, Francesco LUZZA. Gut microbiota in inflammatory bowel disease: a target for therapy not to be missedMinerva Gastroenterology 2022; 67(4) doi: 10.23736/S2724-5985.21.02907-7
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Pipika Das, Ananya Dutta, Titli Panchali, Amina Khatun, Riya Kar, Tridip Kumar Das, Manisha Phoujdar, Sudipta Chakrabarti, Kuntal Ghosh, Shrabani Pradhan. Advances in therapeutic applications of fish oil: A reviewMeasurement: Food 2024; 13 doi: 10.1016/j.meafoo.2024.100142
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Laila Silamiķele, Rihards Saksis, Ivars Silamiķelis, Patrīcija Paulīne Kotoviča, Monta Brīvība, Ineta Kalniņa, Zane Kalniņa, Dāvids Fridmanis, Jānis Kloviņš. Spatial variation of the gut microbiome in response to long-term metformin treatment in high-fat diet-induced type 2 diabetes mouse model of both sexesGut Microbes 2023; 15(1) doi: 10.1080/19490976.2023.2188663
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Chiranjib Chakraborty, Ashish Ranjan Sharma, Manojit Bhattacharya, Kuldeep Dhama, Sang-Soo Lee. Altered gut microbiota patterns in COVID-19: Markers for inflammation and disease severityWorld Journal of Gastroenterology 2022; 28(25): 2802-2822 doi: 10.3748/wjg.v28.i25.2802
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Shivani Popli Goyal, Chakkaravarthi Saravanan. An insight into the critical role of gut microbiota in triggering the phthalate-induced toxicity and its mitigation using probioticsScience of The Total Environment 2023; 904 doi: 10.1016/j.scitotenv.2023.166889
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Istuti Saraswat, Anjana Goel. Therapeutic Modulation of the Microbiome in Oncology: Current Trends and Future DirectionsCurrent Pharmaceutical Biotechnology 2025; 26(5) doi: 10.2174/0113892010353600241109132441
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Zhe Zhai, Pei-Wei Su, Lan-ying Ma, Hui Yang, Tong Wang, Zheng-Gen Fei, Ya-Nan Zhang, Yuan Wang, Ke Ma, Bing-Bing Han, Zhi-Chun Wu, Hua-Yun Yu, Hai-Jun Zhao. Progress on traditional Chinese medicine in treatment of ischemic stroke via the gut-brain axisBiomedicine & Pharmacotherapy 2023; 157 doi: 10.1016/j.biopha.2022.114056
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Yu Wang, Cheng Chen, Xin Xiao, Yajing Kang, Jinhan He, Ana Beloqui, Yining Xu. Advanced oral therapies for colorectal cancer via nanomedicine and microbiota modulationAdvanced Drug Delivery Reviews 2026; 228 doi: 10.1016/j.addr.2025.115741
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Sebastião M.B. Duarte, Jose Tadeu Stefano, Claudia P. Oliveira. Microbiota and nonalcoholic fatty liver disease/nonalcoholic steatohepatitis (NAFLD/NASH)Annals of Hepatology 2019; 18(3) doi: 10.1016/j.aohep.2019.04.006
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Sorina Nicoleta Voicu, Anca Ioana (Amzăr) Scărlătescu, Miruna-Maria Apetroaei, Marina Ionela (Ilie) Nedea, Ionuț Emilian Blejan, Denisa Ioana Udeanu, Bruno Ștefan Velescu, Manuela Ghica, Octavian Alexandru Nedea, Călin Pavel Cobelschi, Andreea Letiția Arsene. Evaluation of Neuro-Hormonal Dynamics after the Administration of Probiotic Microbial Strains in a Murine Model of HyperthyroidismNutrients 2024; 16(7) doi: 10.3390/nu16071077
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Hettiarachchige Priyanga Sajeewanie Jayapala, Nalaka H. Gamage, Dwi Haryanti, Pitumpe Appuhamilage Nimal Punyasiri, Vishmi Gunasinghe, Sun Young Lim. Seaweed bioactive compounds as functional food for modulating gut microbiotaFisheries and Aquatic Sciences 2025; 28(12) doi: 10.47853/FAS.2025.e69
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Ting Hong, Xin Jiang, Jun Zou, Jie Yang, Hongmin Zhang, Haiyan Mai, Wenhua Ling, Dan Feng. Hepatoprotective effect of curcumin against bisphenol A-induced hepatic steatosis via modulating gut microbiota dysbiosis and related gut-liver axis activation in CD-1 miceThe Journal of Nutritional Biochemistry 2022; 109 doi: 10.1016/j.jnutbio.2022.109103
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Andrea Piccioni, Tommaso de Cunzo, Federico Valletta, Marcello Covino, Emanuele Rinninella, Pauline Raoul, Christian Zanza, Maria Cristina Mele, Francesco Franceschi. Gut Microbiota and Environment in Coronary Artery DiseaseInternational Journal of Environmental Research and Public Health 2021; 18(8) doi: 10.3390/ijerph18084242
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Patrick Denis Browne, Frederik Cold, Andreas Munk Petersen, Sofie Ingdam Halkjær, Alice Højer Christensen, Stig Günther, Lars Hestbjerg Hansen. Engraftment of strictly anaerobic oxygen-sensitive bacteria in irritable bowel syndrome patients following fecal microbiota transplantation does not improve symptomsGut Microbes 2021; 13(1) doi: 10.1080/19490976.2021.1927635
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Rohit Gautam, Pratibha Maan, Arbind Kumar Patel, Sudharsan Vasudevan, Taruna Arora. Unveiling the complex interplay between gut microbiota and polycystic ovary syndrome: A narrative reviewClinical Nutrition 2024; 43(12) doi: 10.1016/j.clnu.2024.10.028
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Kahina Gribi, Mohammed Sebaihia, Mohammed El Amine Bekara, Abla Djebbar, Manel Zeraoulia, Nihel Klouche-Khelil. Analysis of Gut Microbiota Composition in Obese and Normal Weight Algerian Women by 16S rRNA Gene Amplicon SequencingMicrobiology and Biotechnology Letters 2024; 52(4) doi: 10.48022/mbl.2401.01015
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Yufang Liu, Chao Chen, Huifang Liu, Wei Wang, Xiaoli Zhou, Mengmeng Guo, Juanjuan Zhao, Zhu Zeng, Lin Xu. Decoding the gut microbiota-immune dialogue: from bidirectional axis to therapeutic applicationsJournal of Nanobiotechnology 2026; 24(1) doi: 10.1186/s12951-026-04376-4
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Joanna Fotschki, Anna M. Ogrodowczyk, Barbara Wróblewska, Jerzy Juśkiewicz. Side Streams of Vegetable Processing and Its Bioactive Compounds Support Microbiota, Intestine Milieu, and Immune SystemMolecules 2023; 28(11) doi: 10.3390/molecules28114340
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Sarah Lennon, Thomas Lackie, Adriana Miltko, Zoey C. Kearns, Maxime R. Paquette, Richard J. Bloomer, Anyou Wang, Marie van der Merwe. Safety and efficacy of a probiotic cocktail containing P. acidilactici and L. plantarum for gastrointestinal discomfort in endurance runners: randomized double-blinded crossover clinical trialApplied Physiology, Nutrition, and Metabolism 2024; 49(7) doi: 10.1139/apnm-2023-0449
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Ioana Cojocaru, Livia Luculescu, Daniela Negoescu, Irina Strâmbu. Profile of patients admitted in a pulmonology ward and developing Clostridium difficile enterocolitisPneumologia 2019; 68(1) doi: 10.2478/pneum-2019-0010
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Jiayuan Cao, Qiqi Liu, Haining Hao, Yushan Bu, Xiaoying Tian, Ting Wang, Huaxi Yi. RETRACTED: Lactobacillus paracasei X11 Ameliorates Hyperuricemia and Modulates Gut Microbiota in MiceFrontiers in Immunology 2022; 13 doi: 10.3389/fimmu.2022.940228
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Carolyn D. Kramer, Alexandra M. Simas, Xianbao He, Robin R. Ingalls, Ellen O. Weinberg, Caroline Attardo Genco. Distinct roles for dietary lipids and Porphyromonas gingivalis infection on atherosclerosis progression and the gut microbiotaAnaerobe 2017; 45 doi: 10.1016/j.anaerobe.2017.04.011
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Meiwei Wang, Huijun Huang, Yangping Hu, Jing Huang, Huansheng Yang, Lei Wang, Shuai Chen, Chiqing Chen, Shanping He. Effects of dietary microencapsulated tannic acid supplementation on the growth performance, intestinal morphology, and intestinal microbiota in weaning pigletsJournal of Animal Science 2020; 98(5) doi: 10.1093/jas/skaa112
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Ammu P. Nair, Deepika Kaushik, Ashwani Kumar, Jyoti Singh, Emel Oz, Avinash Sharma, Ali Jebreen, Charalampos Proestos, Fatih Oz, Mukul Kumar. Deciphering the Effect of Ginsenoside Rk3 on Gut Microbiota and Its ApplicationsThe FASEB Journal 2025; 39(13) doi: 10.1096/fj.202501234RR
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Yu-Ling Tsai, Tzu-Lung Lin, Chih-Jung Chang, Tsung-Ru Wu, Wei-Fan Lai, Chia-Chen Lu, Hsin-Chih Lai. Probiotics, prebiotics and amelioration of diseasesJournal of Biomedical Science 2019; 26(1) doi: 10.1186/s12929-018-0493-6
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Gaia Anselmi, Lucilla Gagliardi, Gabriele Egidi, Sabrina Leone, Antonio Gasbarrini, Giacinto Abele Donato Miggiano, Leonarda Galiuto. Gut Microbiota and Cardiovascular DiseasesCardiology in Review 2021; 29(4) doi: 10.1097/CRD.0000000000000327
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Xin Feng, Jie Hu, Xin Zhang. Prevalence and predictors of small intestinal bacterial overgrowth in inflammatory bowel disease: a meta-analysisFrontiers in Medicine 2025; 11 doi: 10.3389/fmed.2024.1490506
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E.F. Vasilyeva. The regulatory role of gut microbiota in inflammation in depression and anxietyS.S. Korsakov Journal of Neurology and Psychiatry 2023; 123(11) doi: 10.17116/jnevro202312311133
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Pablo Roman, Lola Rueda-Ruzafa, Diana Cardona, Alda Cortes-Rodríguez. Gut–brain axis in the executive function of austism spectrum disorderBehavioural Pharmacology 2018; 29(7) doi: 10.1097/FBP.0000000000000428
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Federico Montini, Ashutosh Mangalam, Burcu Zeydan, Joseph Murray, Orhun H. Kantarci. Gut microbiota and gut-derived metabolites in defining multiple sclerosis phenotypic continuumFrontiers in Immunology 2026; 17 doi: 10.3389/fimmu.2026.1858047
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Justine Marchix, Morgane E. Le Dréan, Michel Neunlist, Hélène Boudin. L’axe microbiote-intestin-cerveau, un ménage à troisPratiques en nutrition 2023; 19(75) doi: 10.1016/j.pranut.2023.05.003
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Chandra Mohan Reddy Muthumula, Yaswanthi Yanamadala, Kuppan Gokulan, Kumari Karn, Helen Cunny, Vicki Sutherland, Janine H. Santos, Sangeeta Khare. Effect of in utero and lactational exposure to antiretroviral therapy on the gut microbial composition and metabolic function in aged rat offspringExperimental Biology and Medicine 2025; 250 doi: 10.3389/ebm.2025.10468
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Yuming Shi, Erfan Taherifard, Ali Saeed, Anwaar Saeed. MASLD-Related HCC: A Comprehensive Review of the Trends, Pathophysiology, Tumor Microenvironment, Surveillance, and Treatment OptionsCurrent Issues in Molecular Biology 2024; 46(6) doi: 10.3390/cimb46060356
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Farhana Hoque, Abhijit Das, Jitendra Kumar Sundaray. Microbiome of Finfish and Shellfish2023;  doi: 10.1007/978-981-99-0852-3_3
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Ying Li, Xin Wang, Zitong Zhang, Lei Shi, Liang Cheng, Xue Zhang. Effect of the gut microbiome, plasma metabolome, peripheral cells, and inflammatory cytokines on obesity: a bidirectional two-sample Mendelian randomization study and mediation analysisFrontiers in Immunology 2024; 15 doi: 10.3389/fimmu.2024.1348347
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Shivani Popli Goyal, Gauri A. Chandratre, Anita Rawat, Kanthi Kiran Kondepudi, Prarabdh C. Badgujar, Chakkaravarthi Saravanan. Lactiplantibacillus plantarum MTCC 25433 and Quercetin Blend Ameliorate Benzo[a]pyrene-Induced Gut Dysregulation in a Murine ModelCurrent Microbiology 2025; 82(9) doi: 10.1007/s00284-025-04411-x
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Yu Cao, Jingzhu Gao, Lihua Zhang, Ningbo Qin, Beiwei Zhu, Xiaodong Xia. Jellyfish skin polysaccharides enhance intestinal barrier function and modulate the gut microbiota in mice with DSS-induced colitisFood & Function 2021; 12(20) doi: 10.1039/D1FO02001C
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Yu Jiang, Yue Wan, Jing Li, Yueshui Zhao, Yongshun Ma, Jing Yu, Donghong Yuan, Shixin Xiang, Fukuan Du, Xu Wu, Mingxing Li, Yu Chen, Zhangang Xiao, Qinglian Wen, Wei Hu, Jing Shen. Alterations in Intestinal Microbiota Composition in Mice Treated With Vitamin D3 or CathelicidinFrontiers in Oncology 2021; 11 doi: 10.3389/fonc.2021.700038
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Kiley B. Vander Wyst, Carmen P. Ortega‐Santos, Samantha N. Toffoli, Caroline E. Lahti, Corrie M. Whisner. Diet, adiposity, and the gut microbiota from infancy to adolescence: A systematic reviewObesity Reviews 2021; 22(5) doi: 10.1111/obr.13175
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Huiyi Peng, Honghui Li, Heng Lei, Qin Liu, Zhoujin Tan, Huajuan Lei. Insights into gut microbiota-mediated inhibition of intervertebral disc degeneration by Bushen Huoxue prescription3 Biotech 2026; 16(5) doi: 10.1007/s13205-026-04825-9
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Lena Van Dingenen, Charlotte Segers, Shari Wouters, Mohamed Mysara, Natalie Leys, Samir Kumar-Singh, Surbhi Malhotra-Kumar, Rob Van Houdt. Dissecting the role of the gut microbiome and fecal microbiota transplantation in radio- and immunotherapy treatment of colorectal cancerFrontiers in Cellular and Infection Microbiology 2023; 13 doi: 10.3389/fcimb.2023.1298264
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Mengjie Zhao, Qiong Zhao, Zhiwei Guan, Qianwei Liu, Hongyun Zhou, Qinwan Huang, Bixiu Huo. Effect of Panax ginseng and Fructus Mume on Intestinal Barrier and Gut Microbiota in Rats with DiarrheaJournal of Medicinal Food 2023; 26(3) doi: 10.1089/jmf.2022.K.0069
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Natalia Díaz‐Garrido, Josefa Badia, Laura Baldomà. Microbiota‐derived extracellular vesicles in interkingdom communication in the gutJournal of Extracellular Vesicles 2021; 10(13) doi: 10.1002/jev2.12161
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Fengcheng Song, Yishu Xu, Peng Peng, Hongxu Li, Ranxi Zheng, Haolin Zhang, Yingying Han, Qiang Weng, Zhengrong Yuan. Seasonal Changes in the Structure and Function of Gut Microbiota in the Muskrat (Ondatra zibethicus)Metabolites 2023; 13(2) doi: 10.3390/metabo13020248
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Chloe J. Love, Bethany A. Masson, Carolina Gubert, Anthony J. Hannan. Microbiome in Neurological DiseaseInternational Review of Neurobiology 2022; 167 doi: 10.1016/bs.irn.2022.06.005
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Yunchang Zhang, Xuemeng Si, Ling Yang, Hui Wang, Ye Sun, Ning Liu. Association between intestinal microbiota and inflammatory bowel diseaseAnimal Models and Experimental Medicine 2022; 5(4) doi: 10.1002/ame2.12255
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Fatema Hersi, Sara M. Elgendy, Salma A. Al Shamma, Roa T. Altell, Omar Sadiek, Hany A. Omar. Cancer immunotherapy resistance: The impact of microbiome-derived short-chain fatty acids and other emerging metabolitesLife Sciences 2022; 300 doi: 10.1016/j.lfs.2022.120573
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Amin Valiei, Andrew M. Dickson, Javad Aminian-Dehkordi, Mohammad R. K. Mofrad. Bacterial community dynamics as a result of growth-yield trade-off and multispecies metabolic interactions toward understanding the gut biofilm nicheBMC Microbiology 2024; 24(1) doi: 10.1186/s12866-024-03566-0
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Johanna R. Jahnke, Jeffrey Roach, M. Andrea Azcarate-Peril, Amanda L. Thompson, Brenda A Wilson. Maternal precarity and HPA axis functioning shape infant gut microbiota and HPA axis development in humansPLOS ONE 2021; 16(5) doi: 10.1371/journal.pone.0251782
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Lei Xu, Hua Zhu, Peng Chen, Zhenhao Li, Kai Yang, Peilong Sun, Fangting Gu, Jianyong Wu, Ming Cai. In Vitro Digestion and Fermentation of Different Ethanol-Fractional Polysaccharides from Dendrobium officinale: Molecular Decomposition and Regulation on Gut MicrobiotaFoods 2024; 13(11) doi: 10.3390/foods13111675
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Haipeng Huang, Fangchao Wei, Shan Qiu, Baoshan Xing, Jiaqi Hou. Polystyrene microplastics trigger adiposity in mice by remodeling gut microbiota and boosting fatty acid synthesisScience of The Total Environment 2023; 890 doi: 10.1016/j.scitotenv.2023.164297
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Tong-Pu Li, Chen-Hao Wang, Zhi-Heng Wang, Bing-Ren Hao, Jia-Chu Xie, Hao-Xin Li, Dong-Jie Cai, Shu-Cheng Ye, Lv-Quan Zhao, Rachel Arango. Tetracycline changes the microbial assembly of Hyphantria cunea and reduces its fitnessEnvironmental Entomology 2025; 54(4) doi: 10.1093/ee/nvaf063
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Zaowei Zhong, Fei Fan, Junqiao Lv, Zhiqiang Wang, Beiyang Wang, Chen Deng, Lin Sun. Changes of potential shorty-chain fatty acids producing bacteria in the gut of patients with spinal cord injury: a systematic review and meta-analysisFrontiers in Microbiology 2025; 16 doi: 10.3389/fmicb.2025.1483794
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Davide Banfi, Elisabetta Moro, Annalisa Bosi, Michela Bistoletti, Silvia Cerantola, Francesca Crema, Fabrizio Maggi, Maria Cecilia Giron, Cristina Giaroni, Andreina Baj. Impact of Microbial Metabolites on Microbiota–Gut–Brain Axis in Inflammatory Bowel DiseaseInternational Journal of Molecular Sciences 2021; 22(4) doi: 10.3390/ijms22041623
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Shuang Liu, Yu Zhang, Jian Lv, Ling Zhou. Traditional Chinese Medicine for Allergic Rhinitis: Mechanisms, Evidence, and Gut-Immune Axis TargetsJournal of Asthma and Allergy 2026;  doi: 10.2147/JAA.S571460
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Seo‐Young Kwon, Sung‐Hyun Jo, Joonha Park, Ji‐Hyeon Park, Ye‐Rim Kim, Ji‐Hyun Baek, Min‐Gyu Kim, Bo‐Gyeong Choi, Na Youn Hong, Hee Kyoung Jung, Hee‐Wook Ryu, Jessie S. Jeon, Yun‐Gon Kim. Development of the Gut Microbial Immune and Epithelial Cellular System (GutMICS) to Investigate the Immunological Role of Gut AnaerobesBiotechnology and Bioengineering 2025; 122(9) doi: 10.1002/bit.29031
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Lu Li, Yuanyuan Jiang, Qianqian Zhu, Dawei Liu, Mingkai Chang, Yongzhe Wang, Ruitong Xi, Wenfei Wang. Hyaluronan with Different Molecular Weights Can Affect the Gut Microbiota and Pathogenetic Progression of Post-Intensive Care Syndrome Mice in Different WaysInternational Journal of Molecular Sciences 2023; 24(11) doi: 10.3390/ijms24119757
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Guangying Cui, Shanshuo Liu, Zhenguo Liu, Yuan Chen, Tianwen Wu, Jiamin Lou, Haiyu Wang, Yawen Zou, Ying Sun, Benchen Rao, Zhigang Ren, Yajun Lian, Yan Jiang. Gut Microbiome Distinguishes Patients With Epilepsy From Healthy IndividualsFrontiers in Microbiology 2022; 12 doi: 10.3389/fmicb.2021.696632
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José Alfonso Merino Rivera, Santiago Taracena Pacheco, Enrique Juan Díaz Greene, Federico Leopoldo Rodríguez Weber. Microbiota intestinal: el órgano olvidadoActa Médica Grupo Ángeles 2021; 19(1) doi: 10.35366/98577
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Mengyang Xu, Ethan Y. Zhou, Haifei Shi. Tryptophan and Its Metabolite Serotonin Impact Metabolic and Mental Disorders via the Brain–Gut–Microbiome Axis: A Focus on Sex DifferencesCells 2025; 14(5) doi: 10.3390/cells14050384
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Sadia Kanwal, Thomson Patrick Joseph, Shams Aliya, Siyuan Song, Muhammad Zubair Saleem, Muhammad Azhar Nisar, Yue Wang, Abdo Meyiah, Yufang Ma, Yi Xin. Attenuation of DSS induced colitis by Dictyophora indusiata polysaccharide (DIP) via modulation of gut microbiota and inflammatory related signaling pathwaysJournal of Functional Foods 2020; 64 doi: 10.1016/j.jff.2019.103641
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Gizem Catalkaya, Koen Venema, Luigi Lucini, Gabriele Rocchetti, Dominique Delmas, Maria Daglia, Anna De Filippis, Hang Xiao, José L. Quiles, Jianbo Xiao, Esra Capanoglu. Interaction of dietary polyphenols and gut microbiota: Microbial metabolism of polyphenols, influence on the gut microbiota, and implications on host healthFood Frontiers 2020; 1(2) doi: 10.1002/fft2.25
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Iwona Konieczna, Inga Relich, Maciej Durajski, Lukasz Lechowicz, Magdalena Chrapek, Jozef Gaweda, Justyna Fraczyk, Zbigniew J. Kaminski. Novel tool in rheumatoid arthritis diagnosis—The usage of urease flap region peptidomimeticsJournal of Peptide Science 2018; 24(6) doi: 10.1002/psc.3084
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Rui Hou, Xiaowei Jin, Jingchun Feng, Jingchuan Xue, Chengzhi Chen, Yuanqiang Zou, Xiangrong Xu, Kefu Yu, Pei-Yuan Qian, Wei Zhang, Jizhong Zhou, Si Zhang, Zhifeng Yang. Deciphering the universal role of gut microbiota in pollutant transformationThe ISME Journal 2025; 19(1) doi: 10.1093/ismejo/wraf215
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J. Marc Rhoads, James Collins, Nicole Y. Fatheree, S. Shahrukh Hashmi, Christopher M. Taylor, Meng Luo, Thomas K. Hoang, Wallace A. Gleason, Melissa R. Van Arsdall, Fernando Navarro, Yuying Liu. Infant Colic Represents Gut Inflammation and DysbiosisThe Journal of Pediatrics 2018; 203 doi: 10.1016/j.jpeds.2018.07.042
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Jing Sun, Qinfang Xie, Mengjiao Sun, Wenjing Zhang, Hongxia Wang, Ning Liu, Manxia Wang. Curcumin protects mice with myasthenia gravis by regulating the gut microbiota, short-chain fatty acids, and the Th17/Treg balanceHeliyon 2024; 10(4) doi: 10.1016/j.heliyon.2024.e26030
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Hosna Mirfakhraee, Milad Sabaei, Maryam Niksolat, Fatemeh Faraji, Samaneh Saghafian Larijani, Soheil Rahmani Fard, Zhale Zandieh, Sara Minaeian. Comparison of gut microbiota profiles between patients suffering from elderly frailty syndrome and non-frail elderly individualsMolecular Biology Reports 2024; 51(1) doi: 10.1007/s11033-024-09271-5
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Anup Kumar Mani, Venkatachalam Deepa Parvathi, Sumitha Ravindran. The Anti-Elixir Triad: Non-Synced Circadian Rhythm, Gut Dysbiosis, and Telomeric DamageMedical Principles and Practice 2024; 34(3) doi: 10.1159/000542557
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Hourieh Sadrekarimi, Zhanna R. Gardanova, Morteza Bakhshesh, Farnoosh Ebrahimzadeh, Amirhossein Fakhre Yaseri, Lakshmi Thangavelu, Zahra Hasanpoor, Firoozeh Abolhasani Zadeh, Mohammad Saeed Kahrizi. Emerging role of human microbiome in cancer development and response to therapy: special focus on intestinal microfloraJournal of Translational Medicine 2022; 20(1) doi: 10.1186/s12967-022-03492-7
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Thessa Van Pee, Janneke Hogervorst, Yinthe Dockx, Katrien Witters, Sofie Thijs, Congrong Wang, Eva Bongaerts, Jonathan D. Van Hamme, Jaco Vangronsveld, Marcel Ameloot, Jeroen Raes, Tim S. Nawrot. Accumulation of Black Carbon Particles in Placenta, Cord Blood, and Childhood Urine in Association with the Intestinal Microbiome Diversity and Composition in Four- to Six-Year-Old Children in the ENVIR ON AGE Birth Cohort Environmental Health Perspectives 2023; 131(1) doi: 10.1289/EHP11257
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Prerna Bhalla, Raghunathan Rengaswamy, Devarajan Karunagaran, G. K. Suraishkumar, Swagatika Sahoo. Metabolic modeling of host–microbe interactions for therapeutics in colorectal cancernpj Systems Biology and Applications 2022; 8(1) doi: 10.1038/s41540-021-00210-9
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Shuanglan Chen, Lijuan Dan, Li Xiang, Qingman He, Dongsen Hu, Yongxiang Gao. The role of gut flora-driven Th cell responses in preclinical rheumatoid arthritisJournal of Autoimmunity 2025; 154 doi: 10.1016/j.jaut.2025.103426
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Gabriel Olteanu, Maria-Alexandra Ciucă-Pană, Ștefan Sebastian Busnatu, Dumitru Lupuliasa, Sorinel Marius Neacșu, Magdalena Mititelu, Adina Magdalena Musuc, Corina-Bianca Ioniță-Mîndrican, Steluța Constanța Boroghină. Unraveling the Microbiome–Human Body Axis: A Comprehensive Examination of Therapeutic Strategies, Interactions and ImplicationsInternational Journal of Molecular Sciences 2024; 25(10) doi: 10.3390/ijms25105561
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Ciaran Devoy, Yensi Flores Bueso, Mark Tangney. Understanding and harnessing triple-negative breast cancer-related microbiota in oncologyFrontiers in Oncology 2022; 12 doi: 10.3389/fonc.2022.1020121
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Munwar Ali, Chang Xu, Mingyue Wang, Qazal Hina, Yaru Ji, Subiha Anwar, Sijia Lu, Qing He, Yawei Qiu, Kun Li. Gut Barrier Dysfunction and Microbiota Variations in Cryptosporidiosis: A Comprehensive ReviewVeterinary Sciences 2025; 12(2) doi: 10.3390/vetsci12020085
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V. B. Grinevich, Yu. A. Kravchuk, V. I. Ped’, G. G. Rodionov, I. I. Shantyr’, V. I. Kuvakin, E. V. Svetkina, M. M. Arapkhanovа, S. A. Medvedko. Clinical efficacy of Meteospasmyl in treatment of painful abdominal and dyspeptic syndromes in patients with chronic pancreatitisMedical alphabet 2019; 2(13) doi: 10.33667/2078-5631-2019-2-13(388)-5-12
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Ioannis Legakis, George P. Chrousos, Stylianos Chatzipanagiotou. Thyroid Diseases and Intestinal MicrobiomeHormone and Metabolic Research 2023; 55(12) doi: 10.1055/a-2190-3847
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Xuchao Peng, Hong Xian, Ning Ge, Lisha Hou, Tianjiao Tang, Dongmei Xie, Langli Gao, Jirong Yue. Effect of probiotics on glycemic control and lipid profiles in patients with type 2 diabetes mellitus: a randomized, double blind, controlled trialFrontiers in Endocrinology 2024; 15 doi: 10.3389/fendo.2024.1440286
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Yingjun Zhang, Reng Qiu, Zhifeng Zhang, Mikhlid H. Almutairi, Shah Nawaz, Shiqi Dong. Effect of Morchella esculenta polysaccharides on the rectal microbiota of mice challenged with lipopolysaccharidesFrontiers in Veterinary Science 2024; 11 doi: 10.3389/fvets.2024.1446924
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André Luís da Silva Hirayama, Danielle Cristina Fonseca, Ricardo Romiti. Comprehensive Gut Microbiota2022;  doi: 10.1016/B978-0-12-819265-8.00033-4
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Xiaoyan Liu, Wen Jiang, Ganghua Lu, Tingting Qiao, Dingwei Gao, Mengyu Zhang, Haidong Cai, Li Chai, Wanwan Yi, Zhongwei Lv. The Potential Role of Pyrroloquinoline Quinone to Regulate Thyroid Function and Gut Microbiota Composition of Graves’ Disease in MicePolish Journal of Microbiology 2023; 72(4) doi: 10.33073/pjm-2023-042
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Priyanka Sarkar, Sreelekha Chintaluri, Subhaleena Sarkar, Misbah Unnisa, Aparna Jakkampudi, Ambika Prasanna Mulukutla, Sneha Kumari, D. Nageshwar Reddy, Rupjyoti Talukdar. Evaluation of the Crosstalk Between the Host Mycobiome and Bacteriome in Patients with Chronic PancreatitisIndian Journal of Microbiology 2024; 64(2) doi: 10.1007/s12088-024-01207-8
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Julia Corinna Putz, Marilena Wilding, Sonja Lackner, Martin Narrath, Daria Schlotmann, Marie-Therese Sallmutter, Jasmin Tatzer, Andreas Brandstätter, Julia Deborah Lang, Sandra Holasek, Julian Wenninger, Mary I. Butler, Susanne Bengesser, Lena Gruber, Andreas Baranyi, Jolana Wagner-Skacel, Sabrina Mörkl, Cheung Kenneth Chat Pan. Do probiotics modulate dietary intake? Pilot data from a randomized controlled sub-study of the ProBioHRV clinical trial in patients with depression and healthy controlsPLOS One 2026; 21(6) doi: 10.1371/journal.pone.0350801
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Orna Gorelik, Alona Rogad, Lara Holoidovsky, Michael M. Meijler, Neta Sal-Man. Indole intercepts the communication between enteropathogenic E. coli and Vibrio cholerae Gut Microbes 2022; 14(1) doi: 10.1080/19490976.2022.2138677
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Maryam Idrees, Naima Atiq, Rabaab Zahra, Muhammad Imran, Shakira Ghazanfar, Julie C. Dunning Hotopp. Draft genome sequence of Lactiplantibacillus plantarum subsp. plantarum strain HF43, a human gut-associated potential probiotic Microbiology Resource Announcements 2023; 12(9) doi: 10.1128/MRA.00945-22
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Despoina Gyriki, Christos G. Nikolaidis, Eugenia Bezirtzoglou, Chrysa Voidarou, Elisavet Stavropoulou, Christina Tsigalou. The gut microbiota and aging: interactions, implications, and interventionsFrontiers in Aging 2025; 6 doi: 10.3389/fragi.2025.1452917
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Hochan Seo, Cheol-O Kwon, Joo-Hyun Park, Chil-Sung Kang, Tae-Seop Shin, Eun-Young Yang, Jin Woo Jung, Byoung-Seok Moon, Yoon-Keun Kim. Dietary Efficacy Evaluation by Applying a Prediction Model Using Clinical Fecal Microbiome Data of Colorectal Disease to a Controlled Animal Model from an Obesity PerspectiveMicroorganisms 2022; 10(9) doi: 10.3390/microorganisms10091833
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Lijuan Wang, Yuxin Jiang, Qian Yu, Chunping Xiao, Jin Sun, Lili Weng, Ye Qiu. Gentiopicroside improves high-fat diet-induced NAFLD in association with modulation of host serum metabolome and gut microbiome in miceFrontiers in Microbiology 2023; 14 doi: 10.3389/fmicb.2023.1145430
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Lars E. Hillege, Milou A. M. Stevens, Paulien A. J. Kristen, Judith de Vos-Geelen, John Penders, Matthew R. Redinbo, Marjolein L. Smidt. The role of gut microbial β-glucuronidases in carcinogenesis and cancer treatment: a scoping reviewJournal of Cancer Research and Clinical Oncology 2024; 150(11) doi: 10.1007/s00432-024-06028-2
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M. Indira, T. C. Venkateswarulu, K. Abraham Peele, Md. Nazneen Bobby, S. Krupanidhi. Bioactive molecules of probiotic bacteria and their mechanism of action: a review3 Biotech 2019; 9(8) doi: 10.1007/s13205-019-1841-2
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Fardou H. Heida, Elisabeth M. W. Kooi, Josef Wagner, Thi-Yen Nguyen, Jan B. F. Hulscher, Anne G. J. F. van Zoonen, Arend F. Bos, Hermie J. M. Harmsen, Marcus C. de Goffau. Weight shapes the intestinal microbiome in preterm infants: results of a prospective observational studyBMC Microbiology 2021; 21(1) doi: 10.1186/s12866-021-02279-y
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Marco Fiore, Antonio Corrente, Sveva Di Franco, Aniello Alfieri, Maria Caterina Pace, Francesca Martora, Stephen Petrou, Claudio Mauriello, Sebastiano Leone. Antimicrobial approach of abdominal post-surgical infectionsWorld Journal of Gastrointestinal Surgery 2023; 15(12): 2674-2692 doi: 10.4240/wjgs.v15.i12.2674
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Ghalya Ashkanani, Mlaak Rob, Mahmoud Yousef, Alia Ashkanani, Yousef A. Al-Najjar, Sa’ad Laws, Ali Chaari. The Effects of Microbiome Modulating Therapies on Inflammatory Markers in Autoimmune Disease: A Systematic Review and Meta-AnalysisNutrients 2026; 18(4) doi: 10.3390/nu18040560
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Rodrigo Zamignan Carpi, Sandra M. Barbalho, Katia Portero Sloan, Lucas Fornari Laurindo, Heron Fernando Gonzaga, Paulo Cesar Grippa, Tereza L. Menegucci Zutin, Raul J. S. Girio, Cláudia Sampaio Fonseca Repetti, Cláudia Rucco Penteado Detregiachi, Patrícia C. Santos Bueno, Eliana de Souza Bastos Mazuqueli Pereira, Ricardo de Alvares Goulart, Jesselina Francisco dos Santos Haber. The Effects of Probiotics, Prebiotics and Synbiotics in Non-Alcoholic Fat Liver Disease (NAFLD) and Non-Alcoholic Steatohepatitis (NASH): A Systematic ReviewInternational Journal of Molecular Sciences 2022; 23(15) doi: 10.3390/ijms23158805
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Lihong Zhao, Stephanie R. Lundy, Francis O. Eko, Joeseph U. Igietseme, Yusuf O. Omosun. Genital tract microbiome dynamics are associated with time of Chlamydia infection in miceScientific Reports 2023; 13(1) doi: 10.1038/s41598-023-36130-3
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Mohammad Esmaeil Amini, Navid Shomali, Arash Bakhshi, Somaye Rezaei, Maryam Hemmatzadeh, Ramin Hosseinzadeh, Solat Eslami, Farhad Babaie, Saeed Aslani, Shahram Torkamandi, Hamed Mohammadi. Gut microbiome and multiple sclerosis: New insights and perspectiveInternational Immunopharmacology 2020; 88 doi: 10.1016/j.intimp.2020.107024
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Valentina Origüela, Alvaro Lopez-Zaplana. Gut Microbiota: An Immersion in Dysbiosis, Associated Pathologies, and ProbioticsMicroorganisms 2025; 13(5) doi: 10.3390/microorganisms13051084
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Song Liu, Kaijun Wang, Senzhu Lin, Zhidan Zhang, Ming Cheng, Shanshan Hu, Hongjie Hu, Jun Xiang, Fengming Chen, Gonghe Li, Hongbin Si. Comparison of the Effects between Tannins Extracted from Different Natural Plants on Growth Performance, Antioxidant Capacity, Immunity, and Intestinal Flora of Broiler ChickensAntioxidants 2023; 12(2) doi: 10.3390/antiox12020441
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Yuelong Sun, Mengjie Zhang, Dongdong Shi, Xiaofeng Dai, Xiumei Li. Effects of Designed Herbal Formula on Growth Performance, Blood Indices, Organ Traits, and Cecum Microbiology in BroilersVeterinary Sciences 2024; 11(3) doi: 10.3390/vetsci11030107
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Shanshan Zeng, Xiansheng Liao, Zheng Liu, Feng Liu, Wenjing Gui, Weiwei Ren, Hongzheng Lin, Yucheng Zheng, Naixing Ye. Genetic and metabolic signatures of blooming-stage tea flowers in novel albino cultivars: Implications for functional food developmentFood Bioscience 2025; 69 doi: 10.1016/j.fbio.2025.107024
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Daan Jansen, Jelle Matthijnssens. The Emerging Role of the Gut Virome in Health and Inflammatory Bowel Disease: Challenges, Covariates and a Viral ImbalanceViruses 2023; 15(1) doi: 10.3390/v15010173
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Brandon Flaig, Rachel Garza, Bhavdeep Singh, Sevag Hamamah, Mihai Covasa. Treatment of Dyslipidemia through Targeted Therapy of Gut MicrobiotaNutrients 2023; 15(1) doi: 10.3390/nu15010228
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Carla B. P. Silva, Jefferson Elias-Oliveira, Cameron G. McCarthy, Camilla F. Wenceslau, Daniela Carlos, Rita C. Tostes. Ethanol: striking the cardiovascular system by harming the gut microbiotaAmerican Journal of Physiology-Heart and Circulatory Physiology 2021; 321(2) doi: 10.1152/ajpheart.00225.2021
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M. Rajeswari, Sudhakar Pola, D. S. L. Sravani. Human Microbiome in Health, Disease, and Therapy2023;  doi: 10.1007/978-981-99-5114-7_6
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Anna Lambert, Marko Budinich, Maxime Mahé, Samuel Chaffron, Damien Eveillard. Community metabolic modeling of host-microbiota interactions through multi-objective optimizationiScience 2024; 27(6) doi: 10.1016/j.isci.2024.110092
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Lirong Lei, Ning Zhao, Lei Zhang, Jiamei Chen, Xiaomin Liu, Shenghua Piao. Gut microbiota is a potential goalkeeper of dyslipidemiaFrontiers in Endocrinology 2022; 13 doi: 10.3389/fendo.2022.950826
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Ana R. da Silva Ferreira, Hannah R. Wardill, Wim J.E. Tissing, Hermie J.M. Harmsen. Pitfalls and novel experimental approaches to optimize microbial interventions for chemotherapy-induced gastrointestinal mucositisCurrent Opinion in Supportive & Palliative Care 2020; 14(2) doi: 10.1097/SPC.0000000000000497
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Alexander Blagov, Konstantin Rufanov, Khokhlova Irina, Vasily Sukhorukov, Andrey Goncharov, Elizaveta Pleshko, Alexander Orekhov. The Significance of Lipoproteins in the Development of ObesityFrontiers in Bioscience-Scholar 2024; 16(1) doi: 10.31083/j.fbs1601008
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Maria Elieidy Gomes de Oliveira. Probiotics for Human Nutrition in Health and Disease2022;  doi: 10.1016/B978-0-323-89908-6.00018-2
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Zhanrong Zhang, Zheng Zhang, Haoming Shu, Yichen Meng, Tao Lin, Jun Ma, Jianquan Zhao, Xuhui Zhou. Association between gut microbiota and bone metabolism: Insights from bibliometric analysisFrontiers in Physiology 2023; 14 doi: 10.3389/fphys.2023.1156279
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Jesse Ouwehand, Bregje W Brinkmann, Willie J G M Peijnenburg, Martina G Vijver. Microbial custody: key microbiome inhabitant Sphingomonas alleviates silver nanoparticle toxicity in Daphnia magna FEMS Microbiology Ecology 2025; 101(7) doi: 10.1093/femsec/fiaf061
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Rong Fu, Ruiyan Niu, Fangye Zhao, Jixiang Wang, Qiqi Cao, Yanghuan Yu, Ci Liu, Ding Zhang, Zilong Sun. Exercise alleviated intestinal damage and microbial disturbances in mice exposed to fluorideChemosphere 2022; 288 doi: 10.1016/j.chemosphere.2021.132658
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Zabdiel Alvarado-Martinez, Stephanie Filho, Megan Mihalik, Rachel Rha, Michelle Snyder. Gut Microbiome and Its Impact on Health and Diseases2020;  doi: 10.1007/978-3-030-47384-6_5
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Haoran Sha, Xiaoyi He, Kai Yan, Jiakang Li, Xu Li, Yinyin Xie, Yousheng Yang, Yajuan Deng, Guoying Li, Junhua Yang. Blocking coprophagy increases the levels of inflammation and depression in healthy mice as well as mice receiving fecal microbiota transplantation from disease model mice donorsAPMIS 2023; 131(7) doi: 10.1111/apm.13326
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Deborah Traversi, Caterina Armato, Elisa Anedda, Eugenio Lorenzi, Ilaria Mania, Giorgio Gilli, Roberta Gorra. 16S rRNA Gene and Transcript Profiling: an Application on Full-scale Anaerobic Reactors of Wastewater SludgesBioEnergy Research 2019; 12(4) doi: 10.1007/s12155-019-10012-x
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Lan Zhang, Lei Wang, Jintai Huang, Zhan Jin, Junxiang Guan, Hang Yu, Meng Zhang, Miao Yu, Hongxia Jiang, Zhigang Qiao. Effects of Aeromonas hydrophila infection on the intestinal microbiota, transcriptome, and metabolomic of common carp (Cyprinus carpio)Fish & Shellfish Immunology 2023; 139 doi: 10.1016/j.fsi.2023.108876
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Dollwin Matharu, Dhiraj Dhotre, Nagalakshmi Balasubramanian, Namrata Pawar, Sneha Sagarkar, Amul Sakharkar. Repeated mild traumatic brain injury affects microbial diversity in rat jejunumJournal of Biosciences 2019; 44(5) doi: 10.1007/s12038-019-9940-0
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Huanxia Liu, Yanguang Yang. Abnormal characteristics of intestinal microenvironment in HIV immunological non-respondersFrontiers in Immunology 2026; 17 doi: 10.3389/fimmu.2026.1796163
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Mihaela Adela Iancu, Monica Profir, Oana Alexandra Roşu, Ruxandra Florentina Ionescu, Sanda Maria Cretoiu, Bogdan Severus Gaspar. Revisiting the Intestinal Microbiome and Its Role in Diarrhea and ConstipationMicroorganisms 2023; 11(9) doi: 10.3390/microorganisms11092177
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Naomi Davies, Justin M. O’Sullivan, Lindsay D. Plank, Rinki Murphy. Gut Microbial Predictors of Type 2 Diabetes Remission Following Bariatric SurgeryObesity Surgery 2020; 30(9) doi: 10.1007/s11695-020-04684-0
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Bhusan K Kuntal, Pranjal Chandrakar, Sudipta Sadhu, Sharmila S Mande. ‘NetShift’: a methodology for understanding ‘driver microbes’ from healthy and disease microbiome datasetsThe ISME Journal 2019; 13(2) doi: 10.1038/s41396-018-0291-x
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Asadatun Abdullah, Rahadian Pratama, Tati Nurhayati, Windy Sibuea, Sabila Diana Ahmad Sauqi. Bacterial community comparison revealed by metagenomic analysis and physicochemical properties of eastern little tuna (Euthynnus affinis) with storage temperature differencesFisheries and Aquatic Sciences 2023; 26(10) doi: 10.47853/FAS.2023.e51
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Jure Povšin, Timotej Sotošek, Metka Novak, Barbara Breznik. GUT MICROBIOME IN CANCER: THE NEXT BIG OPPORTUNITY FOR BETTER PATIENT OUTCOMES?Slovenian Veterinary Research 2025; 62(27-Suppl) doi: 10.26873/SVR-2029-2024
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David Dao, Bingqing Xie, Urooba Nadeem, Jason Xiao, Asad Movahedan, Mark D’Souza, Vanessa Leone, Seenu M. Hariprasad, Eugene B. Chang, Dinanath Sulakhe, Dimitra Skondra. High-Fat Diet Alters the Retinal Transcriptome in the Absence of Gut MicrobiotaCells 2021; 10(8) doi: 10.3390/cells10082119
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Mohaddeseh Bahmani, Saba Mehrtabar, Ali Jafarizadeh, Sevda Zoghi, Fatemah Sadeghpour Heravi, Amin Abbasi, Sarvin Sanaie, Sama Rahnemayan, Hamed Ebrahimzadeh Leylabadlo. The Gut Microbiota and Major Depressive Disorder: Current Understanding and Novel Therapeutic StrategiesCurrent Pharmaceutical Biotechnology 2024; 25(16) doi: 10.2174/0113892010281892240116081031
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Stefani Lobionda, Panida Sittipo, Hyog Young Kwon, Yun Kyung Lee. The Role of Gut Microbiota in Intestinal Inflammation with Respect to Diet and Extrinsic StressorsMicroorganisms 2019; 7(8) doi: 10.3390/microorganisms7080271
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Lijun Qin, Junpeng Qi, Guanwang Shen, Daoyuan Qin, Jinxin Wu, Yuwei Song, Yang Cao, Ping Zhao, Qingyou Xia, Chengshu Wang, Guanhong Wang. Effects of Microbial Transfer during Food-Gut-Feces Circulation on the Health of Bombyx moriMicrobiology Spectrum 2022; 10(6) doi: 10.1128/spectrum.02357-22
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Li Tang, Shuo Zhang, Min Zhang, Pengjiao Wang, Guiyou Liang, Zhitong Gan, Xiuli Gao. Unlocking the potential of Rosa roxburghii Tratt polyphenol: a novel approach to treating acute lung injury from a perspective of the lung-gut axisFrontiers in Microbiology 2024; 15 doi: 10.3389/fmicb.2024.1351295
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Melissa A. Burmeister, Tara E. Smith, Timothy K. Fincher, Abby J. Weldon. Evidence for proton-pump inhibitor (PPI)-associated dysbiosis in metabolically unhealthy obesityFrontiers in Endocrinology 2023; 14 doi: 10.3389/fendo.2023.1205490
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Oana Belei, Diana-Georgiana Basaca, Laura Olariu, Manuela Pantea, Daiana Bozgan, Anda Nanu, Iuliana Sîrbu, Otilia Mărginean, Ileana Enătescu. The Interaction between Stress and Inflammatory Bowel Disease in Pediatric and Adult PatientsJournal of Clinical Medicine 2024; 13(5) doi: 10.3390/jcm13051361
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Sevag Hamamah, Andrei Lobiuc, Mihai Covasa. Antioxidant Role of Probiotics in Inflammation-Induced Colorectal CancerInternational Journal of Molecular Sciences 2024; 25(16) doi: 10.3390/ijms25169026
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Jozef Kuzma, Dittmar Chmelař, Michal Hájek, Alexandra Lochmanová, Ivan Čižnár, Miroslav Rozložník, Miloslav Klugar. The role of intestinal microbiota in the pathogenesis of colorectal carcinomaFolia Microbiologica 2020; 65(1) doi: 10.1007/s12223-019-00706-2
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Sonia Ramos, María Ángeles Martín. Impact of diet on gut microbiotaCurrent Opinion in Food Science 2021; 37 doi: 10.1016/j.cofs.2020.09.006
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Emad Shehata, Jasmine Percival, Mark Philo, Paul W. Needs, Michael N. Clifford, Paul A. Kroon. Aerobic in vitro studies of spontaneous anthocyanin degradation are not useful models for anthocyanin breakdown in the human colonFood Chemistry 2025; 486 doi: 10.1016/j.foodchem.2025.144614
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Musaalbakri Abdul Manan, Ivan Salmerón. Progress in Probiotic Science: Prospects of Functional Probiotic‐Based Foods and BeveragesInternational Journal of Food Science 2025; 2025(1) doi: 10.1155/ijfo/5567567
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Shahd Ezzeldin, Aya El-Wazir, Shymaa Enany, Abdelrahman Muhammad, Dina Johar, Aya Osama, Eman Ahmed, Hassan Shikshaky, Sameh Magdeldin. Current Understanding of Human Metaproteome Association and ModulationJournal of Proteome Research 2019; 18(10) doi: 10.1021/acs.jproteome.9b00301
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Wirulda Pootakham. A comprehensive look at Xenopus gut microbiota: effects of feed, developmental stages and parental transmission Peer Community in Genomics 2021;  doi: 10.24072/pci.genomics.100005
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Yvonne Nguyen, Josephine Rudd Zhong Manis, Nicole Marie Ronczkowski, Tommy Bui, Allston Oxenrider, Ravirajsinh N. Jadeja, Menaka C. Thounaojam. Unveiling the gut-eye axis: how microbial metabolites influence ocular health and diseaseFrontiers in Medicine 2024; 11 doi: 10.3389/fmed.2024.1377186
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Hamad H. Alanazi. Immune discrimination between commensals and pathogenic bacteriaVirulence 2026; 17(1) doi: 10.1080/21505594.2026.2677297
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Dongmei Wang, Jieying Liu, Liyuan Zhou, Qian Zhang, Ming Li, Xinhua Xiao. Effects of Oral Glucose-Lowering Agents on Gut Microbiota and Microbial MetabolitesFrontiers in Endocrinology 2022; 13 doi: 10.3389/fendo.2022.905171
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Jia-Wei He, Xu-Jie Zhou, Ya-Feng Li, Yan-Na Wang, Li-Jun Liu, Su-Fang Shi, Xiao-Hong Xin, Rong-Shan Li, Mario Falchi, Ji-Cheng Lv, Hong Zhang, Rosie Alegado. Associations of Genetic Variants Contributing to Gut Microbiota Composition in Immunoglobin A NephropathymSystems 2021; 6(1) doi: 10.1128/mSystems.00819-20
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Raunak Jay Soman, Malisetty Venkat Swamy. A prospective, randomized, double-blind, placebo-controlled, parallel-group study to evaluate the efficacy and safety of SNZ TriBac, a three-strain Bacillus probiotic blend for undiagnosed gastrointestinal discomfortInternational Journal of Colorectal Disease 2019; 34(11) doi: 10.1007/s00384-019-03416-w
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Kaiqin He, Cong Han, Chenyang Liu, Lixia Zhang. Diversity and Composition of Gut Microbiota in Different Developmental Stages of the Tibetan Toad (Bufo tibetanus)Animals 2025; 15(12) doi: 10.3390/ani15121742
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Pooja Tiwary, Krishil Oswal, Nikolay T. Tzvetkov, Olena Litvinova, Atanas G. Atanasov, Ryan Varghese. Travel microbiota: a novel frontier in travel medicine exploring microbial shifts across transportation modesTropical Diseases, Travel Medicine and Vaccines 2026; 12(1) doi: 10.1186/s40794-026-00292-5
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Francesca Fianchi, Antonio Liguori, Antonio Gasbarrini, Antonio Grieco, Luca Miele. Nonalcoholic Fatty Liver Disease (NAFLD) as Model of Gut–Liver Axis Interaction: From Pathophysiology to Potential Target of Treatment for Personalized TherapyInternational Journal of Molecular Sciences 2021; 22(12) doi: 10.3390/ijms22126485
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Xueyuan Jiang, Hulong Lei, Peng Jia, Dong Xia, Haiying Zhao, Zhou Tong, Shiwei Wei, Naisheng Lu. The impact of lettuce-derived polyphenols on laying hens: Production performance, antioxidant status, immune function, and cecal microbiota profilesPoultry Science 2026; 105(7) doi: 10.1016/j.psj.2026.106932
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Chunduo Pan, Pan Xu, Minli Yuan, Shanjie Wei, Yan Lu, Hongyan Lu, Wen Zhang. Effects of Different Feeding Patterns on the Gut Virome of 6‐Month‐Old InfantsJournal of Medical Virology 2025; 97(4) doi: 10.1002/jmv.70344
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Xin Xie, Qinyuan Li, Lufan Jia, Hao Yuan, Ting Guo, Tao Meng. Multishell Colloidosome Platform with Sequential Gastrointestinal Resistance for On‐Demand Probiotic DeliveryAdvanced Healthcare Materials 2023; 12(12) doi: 10.1002/adhm.202202954
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Yunzhen Zhu, Juan Luo, Zhaoqing Yang, Yinglei Miao. High-throughput sequencing analysis of differences in intestinal microflora between ulcerative colitis patients with different glucocorticoid response typesGenes & Genomics 2020; 42(10) doi: 10.1007/s13258-020-00986-w
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Kejin Zhuang, Xin Shu, Weihong Meng, Dongjie Zhang. Blended-protein changes body weight gain and intestinal tissue morphology in rats by regulating arachidonic acid metabolism and secondary bile acid biosynthesis induced by gut microbiotaEuropean Journal of Nutrition 2024; 63(5) doi: 10.1007/s00394-024-03359-1
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西亚 罗. Research Progress of Traditional Chinese Medicine Fermented by Intestinal FloraHans Journal of Medicinal Chemistry 2023; 11(04) doi: 10.12677/HJMCe.2023.114027
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Imran Mohammad, Md. Rizwan Ansari, Mohammed Sarosh Khan, Md. Nadeem Bari, Mohammad Azhar Kamal, Muhammad Musthafa Poyil. Beyond Digestion: The Gut Microbiota as an Immune–Metabolic Interface in Disease ModulationGastrointestinal Disorders 2025; 7(4) doi: 10.3390/gidisord7040077
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Veronica Lazar, Lia-Mara Ditu, Gratiela G. Pircalabioru, Ariana Picu, Laura Petcu, Natalia Cucu, Mariana Carmen Chifiriuc. Gut Microbiota, Host Organism, and Diet Trialogue in Diabetes and ObesityFrontiers in Nutrition 2019; 6 doi: 10.3389/fnut.2019.00021
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Furqan Choudhary, Adib Khan, Mairaj Ahmed Ansari, Ram Prasad, Humaira Farooqi. The Gut Microbiome in Precision Medicine2026;  doi: 10.1016/B978-0-443-40483-2.00054-6
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Nathan Dumont-Leblond, Marc Veillette, Christine Racine, Philippe Joubert, Caroline Duchaine. Development of a robust protocol for the characterization of the pulmonary microbiotaCommunications Biology 2021; 4(1) doi: 10.1038/s42003-021-01690-5
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Bahman Yousefi, Ali Babaeizad, Seyedeh Zahra Banihashemian, Zahra Khatibiyan Feyzabadi, Mehdi Dadashpour, Daryoush Pahlevan, Hadi Ghaffari, Majid Eslami. Gastrointestinal Tract, Microbiota and Multiple Sclerosis (MS) and the Link Between Gut Microbiota and CNSCurrent Microbiology 2023; 80(1) doi: 10.1007/s00284-022-03150-7
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Danielle Ashley, Daya Marasini, Cindi Brownmiller, Jung Ae Lee, Franck Carbonero, Sun-Ok Lee. Impact of Grain Sorghum Polyphenols on Microbiota of Normal Weight and Overweight/Obese Subjects during In Vitro Fecal FermentationNutrients 2019; 11(2) doi: 10.3390/nu11020217
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Yi Liu, Qing Chen, Jian-Zheng Yang, Xiu-Wen Li, Li-Jian Chen, Kai-Kai Zhang, Jia-Li Liu, Jia-Hao Li, Clare Hsu, Long Chen, Jia-Hao Zeng, Qi Wang, Dong Zhao, Jing-Tao Xu. Multi-Omics Analysis Reveals the Role of Sigma-1 Receptor in a Takotsubo-like Cardiomyopathy ModelBiomedicines 2023; 11(10) doi: 10.3390/biomedicines11102766
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Elizabeth Goya-Jorge, Irma Gonza, Pauline Bondue, Germain Druart, Mohamed Al-Chihab, Samiha Boutaleb, Caroline Douny, Bernard Taminiau, Georges Daube, Marie-Louise Scippo, Philippe Thonart, Véronique Delcenserie. Unveiling the influence of a probiotic combination of Heyndrickxia coagulans and Lacticaseibacillus casei on healthy human gut microbiota using the TripleSHIME® systemMicrobiological Research 2024; 285 doi: 10.1016/j.micres.2024.127778
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Francesco Di Pierro. Gut Microbiota Parameters Potentially Useful in Clinical PerspectiveMicroorganisms 2021; 9(11) doi: 10.3390/microorganisms9112402
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Adriyan PRAMONO, Martha ARDIARIA, Edward Kurnia Setiawan LIMIJADI, Etika Ratna NOER, Endang Sri LESTARI, Ferbian Milas SISWANTO. Intermittent fasting modulates human gut microbiota diversity in a phenotype-dependent manner: a systematic reviewBioscience of Microbiota, Food and Health 2024; 43(3) doi: 10.12938/bmfh.2023-111
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F. Naz Cemre Kalayci, Seza Ozen. Possible Role of Dysbiosis of the Gut Microbiome in SLECurrent Rheumatology Reports 2023; 25(12) doi: 10.1007/s11926-023-01115-8
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Shiqi Cai, Zhengan Wang, Xinhong Han, Huangdu Hu, Jingjing Quan, Yan Jiang, Xiaoxing Du, Zhihui Zhou, Yunsong Yu. The correlation between intestinal colonization and infection of carbapenem-resistant Klebsiella pneumoniae: A systematic reviewJournal of Global Antimicrobial Resistance 2024; 38 doi: 10.1016/j.jgar.2024.04.013
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Yanghong Chen, Yi Lin, Caifeng Shan, Zhaoqing Li, Bo Xiao, Rencai He, Xueshi Huang, Zhanyou Wang, Jingsheng Zhang, Wenjun Qiao. Effect of Fufang Huangqi Decoction on the Gut Microbiota in Patients With Class I or II Myasthenia GravisFrontiers in Neurology 2022; 13 doi: 10.3389/fneur.2022.785040
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Zixin Yang, Jinlin Zhu, Wenwei Lu, Fengwei Tian, Hao Zhang, Wei Chen. Integrating artificial intelligence in exploring multiscale gut microbiota and diet relations for health promotion: A comprehensive reviewFood Bioscience 2024; 61 doi: 10.1016/j.fbio.2024.104541
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Akil Akhtar, Madhu Lata, Sonali Sunsunwal, Amit Yadav, Kajal LNU, Srikrishna Subramanian, T. N. C. Ramya. New carbohydrate binding domains identified by phage display based functional metagenomic screens of human gut microbiotaCommunications Biology 2023; 6(1) doi: 10.1038/s42003-023-04718-0
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Varsha Nandwana, Nitesh K. Nandwana, Yogarupa Das, Mariko Saito, Tanisha Panda, Sasmita Das, Frankis Almaguel, Narayan S. Hosmane, Bhaskar C. Das. The Role of Microbiome in Brain Development and Neurodegenerative DiseasesMolecules 2022; 27(11) doi: 10.3390/molecules27113402
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Jia-Yun Xin, Jie Wang, Qian-Qian Ding, Wei Chen, Xi-Ke Xu, Xin-Tong Wei, Yan-Hui Lv, Yan-Ping Wei, Yu Feng, Xian-Peng Zu. Potential role of gut microbiota and its metabolites in radiation-induced intestinal damageEcotoxicology and Environmental Safety 2022; 248 doi: 10.1016/j.ecoenv.2022.114341
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Wu Liu, Jiaqi Huang, Tong Liu, Yutian Hu, Kaifeng Shi, Yi Zhou, Ning Zhang, Chun Wie Chong. Changes in gut microbial community upon chronic kidney diseasePLOS ONE 2023; 18(3) doi: 10.1371/journal.pone.0283389
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Qixiao Zhai, Dingwu Qu, Saisai Feng, Yaqi Yu, Leilei Yu, Fengwei Tian, Jianxin Zhao, Hao Zhang, Wei Chen. Oral Supplementation of Lead-Intolerant Intestinal Microbes Protects Against Lead (Pb) Toxicity in MiceFrontiers in Microbiology 2020; 10 doi: 10.3389/fmicb.2019.03161
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Lili Zhuo, Jiali Xu, Ningning You, Liyan Wang, Yu Song, Yan Luo, Junping Shi. Study on the new strategy and key techniques for accurate prevention and treatment of nonalcoholic steatohepatitis based on intestinal target bacteriaMedicine 2020; 99(50) doi: 10.1097/MD.0000000000022867
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Aiysha Siddiq Khan, Mohan Kamthan, Asghar Ali. Understanding the intricate interactions between microbiota and hostWorld Journal of Experimental Medicine 2025; 15(3): 101277 doi: 10.5493/wjem.v15.i3.101277
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Dong-Hun Kim, Soo-Nyun Choi, Kyongman An, Ji-Hoon Kwak, Kyung-Seok Ko, Kyu-Shik Jeong. Bioactive ceramic-processed water modulates the gut microbiota and hepatic AMPK activation in SMP30 knockout miceGut Microbiome 2026; 7 doi: 10.1017/gmb.2026.10018
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María V. Miranda, Fernanda C. González, Osvaldo S. Paredes-Godoy, Mario A. Maulén, Claudio C. Vásquez†, Waldo A. Díaz-Vásquez. Characterization of metal(loid)s and antibiotic resistance in bacteria of human gut microbiota from chronic kidney disease subjectsBiological Research 2022; 55(1) doi: 10.1186/s40659-022-00389-z
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James K. Pru. Differences in gut microbiota observed in premenopausal and postmenopausal women associate with HIV infection statusMenopause 2021; 28(5) doi: 10.1097/GME.0000000000001770
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Muthukumaran Jayachandran, Stephen Sum Man Chung, Baojun Xu. A critical review of the relationship between dietary components, the gut microbeAkkermansia muciniphila, and human healthCritical Reviews in Food Science and Nutrition 2020; 60(13) doi: 10.1080/10408398.2019.1632789
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Che-Hsuan Wang, Kou-Toung Chung, Li-Yu Su, Wan-Jhen Wu, Pei-Hwa Wang, Ming-Chung Lee, Szu-Chuan Shen, Chung-Hsin Wu. Chinese Herbal Medicines as Natural Alternative Products to Antibiotics in Weaned Piglets through Intestinal Microbiota RegulationInternational Journal of Molecular Sciences 2024; 25(20) doi: 10.3390/ijms252011034
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Hyeung-min Park, Jaram Lee, Soo Young Lee, Chang Hyun Kim, Hyeong Rok Kim. Changes in Gut Microbiome According to Probiotic Intake in Rectal Cancer Patients Undergoing Diverting Stoma Repair: Study ProtocolJournal of Clinical Medicine 2025; 14(20) doi: 10.3390/jcm14207190
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Jai P Singh, Maryam Aleissa, Gautham Chitragari, Ernesto Raul Drelichman, Vijay K Mittal, Jasneet Singh Bhullar. Uncovering the role of microbiota and fecal microbiota transplantation in Crohn’s disease: Current advances and future hurdlesWorld Journal of Methodology 2025; 15(4): 106148 doi: 10.5662/wjm.v15.i4.106148
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Moustafa T. Gabr, Giuseppe Deganutti, Christopher A. Reynolds. Peptidomimetic‐based approach toward inhibitors of microbial trimethylamine lyasesChemical Biology & Drug Design 2021; 97(2) doi: 10.1111/cbdd.13775
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A. A. Tulsky, O. A. Myrinova, A. O. Shchetinina, N. S. Martirosian, E. V. Goncharova, I. A. Kuzina, M. E. Telnova, F. V. Valeeva, N. A. Petunina. Association between gut microbiota and thyroid dysfunctionMeditsinskiy sovet = Medical Council 2024; (6) doi: 10.21518/ms2024-073.
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Shien Wenn Sam, Bilal Hafeez, Hwa Ian Ong, Sonia Gill, Olivia Smibert, Aonghus Lavelle, Adele Burgess, David Proud, Helen Mohan. The impact of faecal diversion on the gut microbiome: a systematic reviewGut Microbiome 2024; 5 doi: 10.1017/gmb.2024.1
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Wenjing Hu, Xiaorui Lyu, Hanyuan Xu, Xiaonan Guo, Huijuan Zhu, Hui Pan, Linjie Wang, Hongbo Yang, Fengying Gong. Intragastric Safflower Yellow Alleviates HFD Induced Metabolic Dysfunction-Associated Fatty Liver Disease in Mice through Regulating Gut Microbiota and Liver Endoplasmic Reticulum StressNutrients 2023; 15(13) doi: 10.3390/nu15132954
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F. Bertram, D. Menge, V. Andresen. Die Bedeutung des Mikrobioms für die AdipositasDer Gynäkologe 2017; 50(2) doi: 10.1007/s00129-016-4022-y
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Yunxin Zhang, Aiping Li, Jing Qiu, Hua Wen, Hanwen Zhang, Xiangjuan Sun. Probiotics for functional constipation in children: an overview of overlapping systematic reviewsFrontiers in Cellular and Infection Microbiology 2024; 13 doi: 10.3389/fcimb.2023.1323521
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Carmen Veríssima Ferreira-Halder, Alessandra Valéria de Sousa Faria, Sheila Siqueira Andrade. Action and function of Faecalibacterium prausnitzii in health and diseaseBest Practice & Research Clinical Gastroenterology 2017; 31(6) doi: 10.1016/j.bpg.2017.09.011
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Wen Dong, Yongzhi Lun, Jie Sun, Ben Liu. Lactobacillus plantarum SAL delays aging-associated oxidative stress and gut microbiota dysbiosis in miceFrontiers in Microbiology 2025; 16 doi: 10.3389/fmicb.2025.1607824
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Zaher Khazaei, Leili Moayed, Golnaz Sharifnia, Elham Goodarzi, Azam Zarghi. Prebiotic prophylaxis of abdominal bloating in mechanically ventilated patients fed through nasogastric tubes: A randomised clinical trialAdvances in Human Biology 2020; 10(3) doi: 10.4103/AIHB.AIHB_50_20
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Nelson Frazão, Ana Sousa, Michael Lässig, Isabel Gordo. Horizontal gene transfer overrides mutation in Escherichia coli colonizing the mammalian gut Proceedings of the National Academy of Sciences 2019; 116(36) doi: 10.1073/pnas.1906958116
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Ju Kyoung Oh, Jong Pyo Chae, Edward Alain B. Pajarillo, Sung Hun Kim, Min‐Jin Kwak, Jong‐Su Eun, Seok Woo Chee, Kwang‐Youn Whang, Sae‐Hun Kim, Dae‐Kyung Kang. Association between the body weight of growing pigs and the functional capacity of their gut microbiotaAnimal Science Journal 2020; 91(1) doi: 10.1111/asj.13418
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Sharlene Demehri, Saynur Vardar, Cristina Godoy, Jose V. Lopez, Paisley Samuel, Toshihisa Kawai, Andrew T. Ozga. Supragingival Plaque Microbiomes in a Diverse South Florida PopulationMicroorganisms 2024; 12(9) doi: 10.3390/microorganisms12091921
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Swapan Banerjee. Recommendation and limitation of probiotics supplementsCurrent Trends in Pharmacy and Pharmaceutical Chemistry 2021; 3(3) doi: 10.18231/j.ctppc.2021.006
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Robert J. Wester, Lyndsey L. Baillie, Garrett C. McCarthy, Carson C. Keever, Lauren E. Jeffery, Paul J. Adams. Dysbiosis not observed in Canadian horses with free fecal liquid (FFL) using 16S rRNA sequencingScientific Reports 2024; 14(1) doi: 10.1038/s41598-024-63868-1
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Fei Fan, Zhaoxiang Bian, Xuan Zhang, Hongwei Wu, Simeng Wang, Si Zhang, Qiong Wang, Fei Han. Big data analytics frameworks for the influence of gut microbiota on the development of tic disorderFrontiers in Computational Neuroscience 2022; 16 doi: 10.3389/fncom.2022.986591
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Xinhong Zhou, Shiyi Li, Yilong Jiang, Jicheng Deng, Chuanpeng Yang, Lijuan Kang, Huaidan Zhang, Xianxin Chen. Use of fermented Chinese medicine residues as a feed additive and effects on growth performance, meat quality, and intestinal health of broilersFrontiers in Veterinary Science 2023; 10 doi: 10.3389/fvets.2023.1157935
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Christos G. Nikolaidis, Despoina Gyriki, Elisavet Stavropoulou, Eleni Karlafti, Triantafyllos Didangelos, Christina Tsigalou, Anastasia Thanopoulou. Targeting the TLR4 axis with microbiota-oriented interventions and innovations in diabetes therapy: a narrative reviewFrontiers in Immunology 2025; 16 doi: 10.3389/fimmu.2025.1701504
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Luciano C. Ramires, Gabriel Silva Santos, Rafaela Pereira Ramires, Lucas Furtado da Fonseca, Madhan Jeyaraman, Sathish Muthu, Anna Vitória Lana, Gabriel Azzini, Curtis Scott Smith, José Fábio Lana. The Association between Gut Microbiota and Osteoarthritis: Does the Disease Begin in the Gut?International Journal of Molecular Sciences 2022; 23(3) doi: 10.3390/ijms23031494
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Mehmet Aykur, Erdoğan Malatyalı, Filiz Demirel, Burçak Cömert-Koçak, Eleni Gentekaki, Anastasios D. Tsaousis, Funda Dogruman-Al. Blastocystis: A Mysterious Member of the Gut MicrobiomeMicroorganisms 2024; 12(3) doi: 10.3390/microorganisms12030461
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Mingming Zhang, Chenchen Wu. The relationship between intestinal goblet cells and the immune responseBioscience Reports 2020; 40(10) doi: 10.1042/BSR20201471
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Dorottya Zsálig, Anikó Berta, Vivien Tóth, Zoltán Szabó, Klára Simon, Mária Figler, Henriette Pusztafalvi, Éva Polyák. A Review of the Relationship between Gut Microbiome and ObesityApplied Sciences 2023; 13(1) doi: 10.3390/app13010610
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Khushboo Chaudhary, Himaani Mehra, Neena Kumar Dhiman. The Gut Microbiome in Precision Medicine2026;  doi: 10.1016/B978-0-443-40483-2.00048-0
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Chenyu Jiang, Luqi Zhu, Xiaosheng Teng, Gang Lin, Hongxun Wen, Zhenjun Yu, Shaojie Duan, Wenyuan Yang, Yaojian Shao. Association Between the Dietary Index for Gut Microbiota and Frailty: Mediating Role of Body Mass IndexFood Science & Nutrition 2025; 13(7) doi: 10.1002/fsn3.70607
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Alina Wilkowska, Łukasz Piotr Szałach, Wiesław Jerzy Cubała. Gut Microbiota in Depression: A Focus on KetamineFrontiers in Behavioral Neuroscience 2021; 15 doi: 10.3389/fnbeh.2021.693362
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Xinyue Cheng, Shan Li, Chuntian Huang, Yi Yang, Rong Liu, Shuaibing Cao, Lei Luo, Baoping Lu. Targeting the intestinal barrier with traditional Chinese medicine for non-alcoholic fatty liver disease: mechanistic insights and therapeutic perspectivesChinese Medicine 2026; 21(1) doi: 10.1186/s13020-025-01311-x
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Gabriele Andrea Lugli, Leonardo Mancabelli, Christian Milani, Federico Fontana, Chiara Tarracchini, Giulia Alessandri, Douwe van Sinderen, Francesca Turroni, Marco Ventura. Comprehensive insights from composition to functional microbe-based biodiversity of the infant human gut microbiotanpj Biofilms and Microbiomes 2023; 9(1) doi: 10.1038/s41522-023-00392-6
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Giorgio Calabrese, Cinzia Myriam Calabrese. Nut Crops - New Insights2023;  doi: 10.5772/intechopen.108567
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Kwang-Rim Baek, Saloni Singh, Hye-Seon Hwang, Seung-Oh Seo. Using Gut Microbiota Modulation as a Precision Strategy Against ObesityInternational Journal of Molecular Sciences 2025; 26(13) doi: 10.3390/ijms26136282
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Qian Wu, Siyu Lu, Lizhong Wang, Xiaoli Liao, Dangheng Wei. Gut microbiota and intestinal polyps: a systematic review and meta-analysis based on 16S rRNA gene sequencingGut Pathogens 2025; 17(1) doi: 10.1186/s13099-025-00784-3
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Ravichandra Vemuri, Kristyn E. Sylvia, Sabra L. Klein, Samuel C. Forster, Magdalena Plebanski, Raj Eri, Katie L. Flanagan. The microgenderome revealed: sex differences in bidirectional interactions between the microbiota, hormones, immunity and disease susceptibilitySeminars in Immunopathology 2019; 41(2) doi: 10.1007/s00281-018-0716-7
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Jiahui Wu, Minyi Qiu, Chi Zhang, Caijuan Zhang, Nan Wang, Fangyuan Zhao, Liqiao LV, Junling Li, A. G. A. Lyu-Bu, Ting Wang, Baosheng Zhao, Shaowei You, Yuanhua Wu, Xueyong Wang. Type 3 resistant starch from Canna edulis modulates obesity and obesity-related low-grade systemic inflammation in mice by regulating gut microbiota composition and metabolismFood & Function 2021; 12(23) doi: 10.1039/D1FO02208C
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Yousef Nami, Anahita Barghi, Mahsa Sadeghi, Tara Farhadi, Sajjad Babaei, Babak Haghshenas. Probiotics in Women's Health: Mechanisms, Benefits, and Potential Applications for Preventing Bacterial Vaginosis and Sexually Transmitted Diseases in Sexual Health ProductsAPMIS 2025; 133(11) doi: 10.1111/apm.70086
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Vincenzo Di Pilato, Giancarlo Freschi, Maria Novella Ringressi, Lucia Pallecchi, Gian Maria Rossolini, Paolo Bechi. The esophageal microbiota in health and diseaseAnnals of the New York Academy of Sciences 2016; 1381(1) doi: 10.1111/nyas.13127
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Tianyu Zhang, Xin Wang, Yi Qu, Xiaoli Zhang, Qianqian Zhang, Dinglong Yang, Qing Wang, Zhijun Dong, Jianmin Zhao. Intestinal microbiota perturbations in the gastropod Trochus niloticus concurrently exposed to ocean acidification and environmentally relevant concentrations of sulfamethoxazoleChemosphere 2023; 311 doi: 10.1016/j.chemosphere.2022.137115
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Fuhong Gong, Nianqiu Liu, Jingge Miao, Chenxi Wang, Mengping Lin, Biqing Luan, Jiayi Chen, Yilin Chen, Xin Chen, Fei Ge, Wenlin Chen. Vitamin D regulation of gut microbiota-derived butyrate as a potential inhibitor of breast cancer proliferationGene 2026; 976 doi: 10.1016/j.gene.2025.149872
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Fayez Yassine, Adam Najm, Melhem Bilen. The role of probiotics, prebiotics, and synbiotics in the treatment of inflammatory bowel diseases: an overview of recent clinical trialsFrontiers in Systems Biology 2025; 5 doi: 10.3389/fsysb.2025.1561047
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Nicola Boccella, Roberta Paolillo, Lorena Coretti, Stefania D’Apice, Adriano Lama, Giuseppe Giugliano, Gabriele Giacomo Schiattarella, Mariella Cuomo, Ilaria d’Aquino, Gina Cavaliere, Orlando Paciello, Maria Pina Mollica, Giuseppina Mattace Raso, Giovanni Esposito, Francesca Lembo, Cinzia Perrino. Transverse aortic constriction induces gut barrier alterations, microbiota remodeling and systemic inflammationScientific Reports 2021; 11(1) doi: 10.1038/s41598-021-86651-y
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Sowmiya S, Jasmine R, Sivakumar Mohan, Rameshkumar Santhanam, Prathiviraj R, George Seghal Kiran, Joseph Selvin. Analysis of the gut microbiota of healthy CARI-Nirbheek (Aseel cross) Chickens: A metagenomic approachesEnvironmental Advances 2022; 9 doi: 10.1016/j.envadv.2022.100304
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Peng Yin, Weiqing Kong, Linyuan Cheng, Nana Shi, Shonghan Wang, Fei Guo, Haitao Shen, Hua Yao, Hongbin Li. Effects of Licorice Stem and Leaf Forage on Growth and Physiology of Hotan SheepAnimals 2025; 15(10) doi: 10.3390/ani15101459
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P. Ray, U. Pandey, P. Aich. Comparative analysis of beneficial effects of vancomycin treatment on Th1‐ and Th2‐biased mice and the role of gut microbiotaJournal of Applied Microbiology 2021; 130(4) doi: 10.1111/jam.14853
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Payam Gonbari Milani, Armaghan Nazari, Azar Abedi Soleimani, Roya Abedi Soleimani. Gut–liver axis and the impact of probiotics on neonatal jaundice symptoms: a reviewGastrointestinal Nursing 2023; 21(Sup6) doi: 10.12968/gasn.2023.21.Sup6.S10
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Salwa Karboune, Erin J. Davis, Ismail Fliss, Eugenio Spadoni Andreani. In-vitro digestion and fermentation of cranberry extracts rich in cell wall oligo/polysaccharidesJournal of Functional Foods 2022; 92 doi: 10.1016/j.jff.2022.105039
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Yang Li, Baozhu Guo, Zhengke Wu, Weiwei Wang, Chong Li, Guohua Liu, Huiyi Cai. Effects of Fermented Soybean Meal Supplementation on the Growth Performance and Cecal Microbiota Community of Broiler ChickensAnimals 2020; 10(6) doi: 10.3390/ani10061098
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Zihan Zhou, Shengnan Yu, Luwen Cui, Kaidi Shao, Hao Pang, Zhipeng Wang, Ningning He, Shangyong Li. Isomaltulose alleviates acute colitis via modulating gut microbiota and the Treg/Th17 balance in miceFood & Function 2022; 13(16) doi: 10.1039/D2FO01157C
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Maria Carmen Andreo-López, Victoria Contreras-Bolívar, Manuel Muñoz-Torres, Beatriz García-Fontana, Cristina García-Fontana. Influence of the Mediterranean Diet on Healthy AgingInternational Journal of Molecular Sciences 2023; 24(5) doi: 10.3390/ijms24054491
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Luciano Chaves Franco Filho, Rafael Ribeiro Barata, Jedson Ferreira Cardoso, Janaina Mota de Vasconcelos Massafra, Poliana da Silva Lemos, Livia Medeiros Neves Casseb, Ana Cecilia Ribeiro Cruz, Marcio Roberto Teixeira Nunes, Julia A. Maresca. Metagenomic Analysis of Samples from Three Bat Species Collected in the Amazon Rain ForestMicrobiology Resource Announcements 2019; 8(2) doi: 10.1128/MRA.01422-18
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Cecilia Binda, Giulia Gibiino, Chiara Coluccio, Monica Sbrancia, Elton Dajti, Emanuele Sinagra, Gabriele Capurso, Vittorio Sambri, Alessandro Cucchetti, Giorgio Ercolani, Carlo Fabbri. Biliary Diseases from the Microbiome Perspective: How Microorganisms Could Change the Approach to Benign and Malignant DiseasesMicroorganisms 2022; 10(2) doi: 10.3390/microorganisms10020312
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Wantao Rong, Yanqi Wei, Yazhen Chen, Lida Huang, Shuiwang Huang, Yiwei Lv, Delong Guan, Xiaodong Li. 16S rRNA Sequencing Analysis Uncovers Dose-Dependent Cupric Chloride Effects on Silkworm Gut Microbiome Composition and DiversityAnimals 2024; 14(24) doi: 10.3390/ani14243634
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Md Masudur Rahman, Adel Bou Alia, Minna Choi, Nicolas Trainel, Pranvera Krasniqi, Aurore Desmons, Catherine Cailleau, Françoise Mercier-Nomé, Vincent Faivre, Natalie Fournier, Anne-Marie Cassard, François-Xavier Legrand. Evaluation of the acute toxicity of the choline chloride : urea deep eutectic solvent and its impact on the intestinal microbiotaGreen Chemistry 2026;  doi: 10.1039/D6GC01988A
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Soo-won Yun, Young-Hoo Son, Dong-Yun Lee, Yoon-Jung Shin, Myung Joo Han, Dong-Hyun Kim. Lactobacillus plantarumandBifidobacterium bifidumalleviate dry eye in mice with exorbital lacrimal gland excision by modulating gut inflammation and microbiotaFood & Function 2021; 12(6) doi: 10.1039/D0FO02984J
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Aleksandr Birg, Nathaniel Ritz, Larry L. Barton, Henry C. Lin. Hydrogen Availability Is Dependent on the Actions of Both Hydrogen-Producing and Hydrogen-Consuming MicrobesDigestive Diseases and Sciences 2023; 68(4) doi: 10.1007/s10620-022-07743-x
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Nikolay Kolzhetsov, Natalia Markelova, Maria Frolova, Olga Alikina, Olga Glazunova, Lubov Safonova, Irina Kalashnikova, Vladimir Yudin, Valentin Makarov, Anton Keskinov, Sergey Yudin, Daria Troshina, Viktoria Rechkina, Viktoria Shcherbakova, Konstantin Shavkunov, Olga Ozoline. Enterotype-Dependent Probiotic-Mediated Changes in the Male Rat Intestinal Microbiome In Vivo and In VitroInternational Journal of Molecular Sciences 2024; 25(8) doi: 10.3390/ijms25084558
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Ditam Chakraborty, Alexandre Jousset, Zhong Wei, Samiran Banerjee. Rare taxa in the core microbiomeTrends in Microbiology 2025; 33(7) doi: 10.1016/j.tim.2025.03.002
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Xiangyang Gao, Fei Wang, Peng Zhao, Rong Zhang, Qiang Zeng. Effect of heat-killedStreptococcus thermophiluson type 2 diabetes ratsPeerJ 2019; 7 doi: 10.7717/peerj.7117
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Zheng Ji, Xinrou Yu, Haodi Gu, Ping Wang, Liping Meng, Hui Lin, Haitao Lv. Role of gut microbiota and its metabolites in diabetic cardiomyopathy: from pathogenesis to interventionsFrontiers in Cardiovascular Medicine 2025; 12 doi: 10.3389/fcvm.2025.1677684
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Caiquan Zhao, YuChen Yang, Peng Zhao, LiGe Bai. Comparative analysis of the fecal microbiota in Père David's deer and five other captive deer speciesFrontiers in Microbiology 2025; 16 doi: 10.3389/fmicb.2025.1547348
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Mohammad Mirza‐Aghazadeh‐Attari, Amir Mohammadzadeh, Soroush Mostavafi, Aynaz Mihanfar, Saber Ghazizadeh, Shirin Sadighparvar, Somaye Gholamzadeh, Maryam Majidinia, Bahman Yousefi. Melatonin: An important anticancer agent in colorectal cancerJournal of Cellular Physiology 2020; 235(2) doi: 10.1002/jcp.29049
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Chloé Liebgott, Iseline Chaib, Périne Doyen, Hervé Robert, Hélène Eutamene, Guillaume Duflos, Stéphanie Reynaud, Bruno Grassl, Muriel Mercier-Bonin. Fate and impact of nanoplastics in the human digestive environment after oral exposure: A common challenge for toxicology and chemistryTrAC Trends in Analytical Chemistry 2023; 166 doi: 10.1016/j.trac.2023.117175
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Shruti Nagaraja, Serge Ankri. Utilization of Different Omic Approaches to Unravel Stress Response Mechanisms in the Parasite Entamoeba histolyticaFrontiers in Cellular and Infection Microbiology 2018; 8 doi: 10.3389/fcimb.2018.00019
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Emily A. Mann, Edward Bae, Darya Kostyuchek, Hye Jin Chung, Jean S. McGee. The Gut Microbiome: Human Health and Inflammatory Skin DiseasesAnnals of Dermatology 2020; 32(4) doi: 10.5021/ad.2020.32.4.265
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Urinary microbiota and serum metabolite analysis in patients with diabetic kidney diseaseHeliyon 2023; 9(8) doi: 10.1016/j.heliyon.2023.e17040
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Emmanuel Edoghogho Imade, Nosa Omoregbe Obayagbona. Impact of cigarette smoking on gut microbial dysbiosis: a structured literature reviewGut Microbiome 2024; 5 doi: 10.1017/gmb.2024.3
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Sonia Mirjam Rizzo, Giulia Longhi, Chiara Tarracchini, Chiara Argentini, Alice Viappiani, Massimiliano G. Bianchi, Ovidio Bussolati, Douwe van Sinderen, Marco Ventura, Francesca Turroni. Understanding the interaction between melatonin and bifidobacteriaMicrobiome Research Reports 2025; 4(2) doi: 10.20517/mrr.2025.10
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Katarzyna Ferenc, Aneta Sokal-Dembowska, Kacper Helma, Elżbieta Motyka, Sara Jarmakiewicz-Czaja, Rafał Filip. Modulation of the Gut Microbiota by Nutrition and Its Relationship to EpigeneticsInternational Journal of Molecular Sciences 2024; 25(2) doi: 10.3390/ijms25021228
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Winnie-Pui-Pui Liew, Sabran Mohd-Redzwan, Leslie Thian Lung Than. Gut Microbiota Profiling of Aflatoxin B1-Induced Rats Treated with Lactobacillus casei ShirotaToxins 2019; 11(1) doi: 10.3390/toxins11010049
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Shanshan Wang, Wangqiang Dai, Zhuang Huang, Jiajing Liu, Hailing Huang, Yan Ye, Pengyu Chen, Bailu Duan, Qi Jiang, Yuxin Wen, Lintao Han, Jingjing Li. Mechanism of Action of Qingrekasen Granules in Alleviating Nephrotic Syndrome Evaluated by a Multi-Omics ApproachNatural Product Communications 2024; 19(8) doi: 10.1177/1934578X241272658
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Chongshan Yuan, Yuhong He, Kunyu Xie, Lianjun Feng, Shouyang Gao, Lifu Cai. Review of microbiota gut brain axis and innate immunity in inflammatory and infective diseasesFrontiers in Cellular and Infection Microbiology 2023; 13 doi: 10.3389/fcimb.2023.1282431
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Amrita Chatterjee, Satish Kumar, Suparna Roy Sarkar, Ritabrata Halder, Rashmi Kumari, Sugato Banerjee, Biswatrish Sarkar. Dietary polyphenols represent a phytotherapeutic alternative for gut dysbiosis associated neurodegeneration: A systematic reviewThe Journal of Nutritional Biochemistry 2024; 129 doi: 10.1016/j.jnutbio.2024.109622
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Bharati Kadamb Patel, Kadamb Haribhai Patel, Chuen Neng Lee, Shabbir Moochhala. Intestinal Microbiota Interventions to Enhance Athletic Performance—A ReviewInternational Journal of Molecular Sciences 2024; 25(18) doi: 10.3390/ijms251810076
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Enriqueta Garcia-Gutierrez, Paul D. Cotter. Relevance of organ(s)-on-a-chip systems to the investigation of food-gut microbiota-host interactionsCritical Reviews in Microbiology 2022; 48(4) doi: 10.1080/1040841X.2021.1979933
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Paola M. Peltzer, Ana P. Cuzziol Boccioni, Candela Martinuzzi, Agustín Bassó, Andrés M. Attademo, María J. Culzoni, Lesly Paradina-Fernandez, Rafael C. Lajmanovich. Amphibian Species in Environmental Risk Assessment Strategies2023;  doi: 10.1039/9781837672004-00081
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Lan Yang, Jiali Zhou, Yushuang Luo, Xincong Kang, Xihu Lai, Zhe Zhou, Xiaohong Zhong, Dongbo Liu. The regulatory effects of Lonicera japonica flos on fecal microbiota from humans with type 2 diabetes in a SHIME modelJournal of Herbal Medicine 2023; 39 doi: 10.1016/j.hermed.2023.100654
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Samuel Chan, Carmel M. Hawley, Katrina L. Campbell, Mark Morrison, Scott B. Campbell, Nicole M. Isbel, Ross S. Francis, Elliot G. Playford, David W. Johnson. Transplant associated infections—The role of the gastrointestinal microbiota and potential therapeutic optionsNephrology 2020; 25(1) doi: 10.1111/nep.13670
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Angela Ancona, Claudia Petito, Irene Iavarone, Valentina Petito, Linda Galasso, Alessia Leonetti, Laura Turchini, Daniela Belella, Daniele Ferrarrese, Giovanni Addolorato, Alessandro Armuzzi, Antonio Gasbarrini, Franco Scaldaferri. The gut–brain axis in irritable bowel syndrome and inflammatory bowel diseaseDigestive and Liver Disease 2021; 53(3) doi: 10.1016/j.dld.2020.11.026
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Shuaitao Lian, Jie Su, Israr Fatima, Yuan Zhang, Tiantian Kuang, Hongjie Hu, Dongshuai Qu, Hongbin Si, Wenjing Sun. Revealing the exceptional antioxidant activity of phosphorylated polysaccharides from medicinal Abrus cantoniensis HanceInternational Journal of Biological Macromolecules 2024; 278 doi: 10.1016/j.ijbiomac.2024.134532
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Sumathi Sankaran-Walters, Ronald Hart, Chantelle Dills. Guardians of the Gut: Enteric DefensinsFrontiers in Microbiology 2017; 8 doi: 10.3389/fmicb.2017.00647
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Caio Carvalho Bustamante, Pâmela A.Maldaner Pereira, Camila Cesáreo Fernandes, Paulo Alescio Canola, Renata G.S. Doria, Marcio C. Costa, Carlos Augusto A. Valadão. Starch Overload and Cecal Alkalinization: Impacts on the Intestinal Microbiota and Health of HorsesVeterinary and Animal Science 2026; 32 doi: 10.1016/j.vas.2026.100619
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Shagun Shukla, Ankita Srivastava, Digvijay Verma, Siddhartha Gangopadhyay, Anchal Chauhan, Vikas Srivastava, Savita Budhwar, Dushyant Tyagi, Deepak Chand Sharma. Analysis of gut bacteriome of in utero arsenic-exposed mice using 16S rRNA-based metagenomic approachFrontiers in Microbiology 2023; 14 doi: 10.3389/fmicb.2023.1147505
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Almagul Kushugulova, Sofia K Forslund, Paul Igor Costea, Samat Kozhakhmetov, Zhanagul Khassenbekova, Maira Urazova, Talgat Nurgozhin, Zhaxybay Zhumadilov, Valery Benberin, Marja Driessen, Rajna Hercog, Anita Yvonne Voigt, Vladimir Benes, Stefanie Kandels-Lewis, Shinichi Sunagawa, Ivica Letunic, Peer Bork. Metagenomic analysis of gut microbial communities from a Central Asian populationBMJ Open 2018; 8(7) doi: 10.1136/bmjopen-2018-021682
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Mara Mădălina Mihai, Ana Ion, Călin Giurcăneanu, Cornelia Nițipir, Ana-Maria Popa, Mariana-Carmen Chifiriuc, Mircea Ioan Popa, Jan Říčař, Liliana Gabriela Popa, Ionela Sârbu, Veronica Lazăr. The Impact of Long-Term Antibiotic Therapy of Cutaneous Adverse Reactions to EGFR Inhibitors in Colorectal Cancer PatientsJournal of Clinical Medicine 2021; 10(15) doi: 10.3390/jcm10153219
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Susanne Bury, Manonmani Soundararajan, Richa Bharti, Rudolf von Bünau, Konrad U. Förstner, Tobias A. Oelschlaeger. The Probiotic Escherichia coli Strain Nissle 1917 Combats Lambdoid Bacteriophages stx and λFrontiers in Microbiology 2018; 9 doi: 10.3389/fmicb.2018.00929
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Pavan Gollapalli, Tamizh Selvan Gnanasekaran, Santosh Kumar Hulikal Shivashankara, Ballamoole Krishna Kumar. Genome-scale mapping of Serratia marcescens core interactome to probe essential proteins and functional modulesBiologia 2026; 81(1) doi: 10.1007/s11756-025-02106-z
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Akio Shinohara, Makoto Nohara, Yuta Kondo, Takamichi Jogahara, Goro A. Nagura-Kato, Masako Izawa, Chihiro Koshimoto. Comparison of the gut microbiotas of laboratory and wild Asian house shrews (<i>Suncus murinus</i>) based on cloned 16S rRNA sequencesExperimental Animals 2019; 68(4) doi: 10.1538/expanim.19-0021
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Carla Fiorentini, Francesca Carlini, Elena Angela Pia Germinario, Zaira Maroccia, Sara Travaglione, Alessia Fabbri. Gut Microbiota and Colon Cancer: A Role for Bacterial Protein Toxins?International Journal of Molecular Sciences 2020; 21(17) doi: 10.3390/ijms21176201
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Avinash Kumar, Vivek S. Patel, Jeffrey N. Harding, Dahui You, Stephania A. Cormier. Exposure to combustion derived particulate matter exacerbates influenza infection in neonatal mice by inhibiting IL22 productionParticle and Fibre Toxicology 2021; 18(1) doi: 10.1186/s12989-021-00438-7
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Alan Jahir Sarmiento Zurita. Revisión: Alternativas terapéuticas a los fármacos antimicrobianos por la problemática de multidrogoresistencia actualRevista Cientifica Ciencia Medica 2024; 26(2) doi: 10.51581/rccm.v26i2.60
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Destiny Ogbu, Eric Xia, Jun Sun. Gut instincts: vitamin D/vitamin D receptor and microbiome in neurodevelopment disordersOpen Biology 2020; 10(7) doi: 10.1098/rsob.200063
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Ligia Aparecida Trintin Cannarella, Naiara Lourenço Mari, Camila Cataldi Alcântara, Tatiana Mayumi Veiga Iryioda, Neide Tomimura Costa, Sayonara Rangel Oliveira, Marcell Alysson Batisti Lozovoy, Edna Maria Vissoci Reiche, Isaias Dichi, Andréa Name Colado Simão. Mixture of probiotics reduces inflammatory biomarkers and improves the oxidative/nitrosative profile in people with rheumatoid arthritisNutrition 2021; 89 doi: 10.1016/j.nut.2021.111282
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Vorthon Sawaswong, Kesmanee Praianantathavorn, Prangwalai Chanchaem, Ariya Khamwut, Taratorn Kemthong, Yuzuru Hamada, Suchinda Malaivijitnond, Sunchai Payungporn. Comparative analysis of oral-gut microbiota between captive and wild long-tailed macaque in ThailandScientific Reports 2021; 11(1) doi: 10.1038/s41598-021-93779-4
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Thobeka Promise Mthembu, Nompilo Lucia Hlongwane, Adeola Salawu-Rotimi, Khanyisile Hadebe, Rian Pierneef. Metagenomic analysis of fecal and environmental microbiota in rural mixed livestock farming systems in South AfricaFrontiers in Cellular and Infection Microbiology 2026; 16 doi: 10.3389/fcimb.2026.1828785
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Consuelo Plata, Cristino Cruz, Luz G. Cervantes, Victoria Ramírez. The gut microbiota and its relationship with chronic kidney diseaseInternational Urology and Nephrology 2019; 51(12) doi: 10.1007/s11255-019-02291-2
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Shaneerra Raajlynn Kaur Sidhu, Chin Wei Kok, Thubasni Kunasegaran, Amutha Ramadas. Effect of Plant-Based Diets on Gut Microbiota: A Systematic Review of Interventional StudiesNutrients 2023; 15(6) doi: 10.3390/nu15061510
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Vibhor Joshi. 2023;  doi: 10.32388/KR9A9U
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Mengyue Yang, Wen Bi, Zhijie Zhang. Gut microbiota and risk of endocarditis: a bidirectional Mendelian randomization studyFrontiers in Microbiology 2024; 15 doi: 10.3389/fmicb.2024.1320095
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Muttiah Barathan, Sook Luan Ng, Yogeswaran Lokanathan, Min Hwei Ng, Jia Xian Law. The Profound Influence of Gut Microbiome and Extracellular Vesicles on Animal Health and DiseaseInternational Journal of Molecular Sciences 2024; 25(7) doi: 10.3390/ijms25074024
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Antonio Inserra, Jared VanderZwaag, Antonella Campanale, Colin Murray, Attila Szabo. Microglial Aging2026;  doi: 10.1016/B978-0-443-27340-7.00008-5
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Bok Sil Hong, Myoung-Ryu Kim. Interplays between human microbiota and microRNAs in COVID-19 pathogenesis: a literature reviewPhysical Activity and Nutrition 2021; 25(2) doi: 10.20463/pan.2021.0008
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Marianna Lucafò, Martina Franzin, Cristina Lagatolla, Raffaella Franca, Matteo Bramuzzo, Gabriele Stocco, Giuliana Decorti. Emerging Insights on the Interaction Between Anticancer and Immunosuppressant Drugs and Intestinal Microbiota in Pediatric PatientsClinical and Translational Science 2020; 13(2) doi: 10.1111/cts.12722
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Shouxin Wei, Sijia Yu, Meng Sun. The association between the dietary index for gut microbiota and frailty: a cross-sectional studyFrontiers in Nutrition 2025; 12 doi: 10.3389/fnut.2025.1580753
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Dipasree Hajra, Nikhita Kirthivasan, Dipshikha Chakravortty. Symbiotic Synergy from Sponges to Humans: Microflora–Host Harmony Is Crucial for Ensuring Survival and Shielding against Invading PathogensACS Infectious Diseases 2024; 10(2) doi: 10.1021/acsinfecdis.3c00554
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Nieves Baenas, Anika E. Wagner. Drosophila melanogaster as an alternative model organism in nutrigenomicsGenes & Nutrition 2019; 14(1) doi: 10.1186/s12263-019-0641-y
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Amin Gasmi, Torsak Tippairote, Pavan Kumar Mujawdiya, Massimiliano Peana, Alain Menzel, Maryam Dadar, Asma Gasmi Benahmed, Geir Bjørklund. The microbiota-mediated dietary and nutritional interventions for COVID-19Clinical Immunology 2021; 226 doi: 10.1016/j.clim.2021.108725
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Zehao Su, Chenyu Tian, Guan Wang, Jingjing Guo, Xiaoyan Yang. Study of the Effect of Intestinal Microbes on Obesity: A Bibliometric AnalysisNutrients 2023; 15(14) doi: 10.3390/nu15143255
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Sharda Nara, Gulshan Parasher, Bansi Dhar Malhotra, Manmeet Rawat. Novel role of folate (vitamin B9) released by fermenting bacteria under Human Intestine like environmentScientific Reports 2023; 13(1) doi: 10.1038/s41598-023-47243-0
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Alessandro Singlitico, Daniele Grassa, Rami Kaplan, Alessandro Smimmo, Giulio Maccauro, Raffaele Vitiello. The hidden connection between gut microbiota and periprosthetic joint infections: a scoping reviewJournal of Bone and Joint Infection 2025; 10(2) doi: 10.5194/jbji-10-85-2025
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Susmita Sudhir Mandal, Pranita Subhash Jirvankar. Strategies for restoring and maintaining gut microbial harmony for optimal healthInternational Journal of Nutrition, Pharmacology, Neurological Diseases 2026; 16(2) doi: 10.4103/ijnpnd.ijnpnd_231_25
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Marta Koperska, Drew D. Kiraly. Microbiome‐derived metabolites in substance use disorders: Mechanisms and implicationsAnnals of the New York Academy of Sciences 2025; 1551(1) doi: 10.1111/nyas.15416
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Hanna Ilchmann-Diounou, Sandrine Menard. Psychological Stress, Intestinal Barrier Dysfunctions, and Autoimmune Disorders: An OverviewFrontiers in Immunology 2020; 11 doi: 10.3389/fimmu.2020.01823
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Montana Dunton, Sandra Inglett, Terri Marin. Influences of Maternal Prepregnancy Obesity and Gestational Diabetes Mellitus on the Infant Gut Microbiome in Full-Term InfantsJournal of Perinatal & Neonatal Nursing 2020; 34(3) doi: 10.1097/JPN.0000000000000504
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Samar Y. Ahmad, James Friel, Dylan Mackay. The Effects of Non-Nutritive Artificial Sweeteners, Aspartame and Sucralose, on the Gut Microbiome in Healthy Adults: Secondary Outcomes of a Randomized Double-Blinded Crossover Clinical TrialNutrients 2020; 12(11) doi: 10.3390/nu12113408
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Josué Camberos-Barraza, Alma M. Guadrón-Llanos, Alberto K. De la Herrán-Arita. The Gut Microbiome-Neuroglia Axis: Implications for Brain Health, Inflammation, and DiseaseNeuroglia 2024; 5(3) doi: 10.3390/neuroglia5030018
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Cheng Lou, Zhuo Chen, Yu Bai, Tongjie Chai, Yuling Guan, Bo Wu. Exploring the Microbial Community Structure in the Chicken House Environment by Metagenomic AnalysisAnimals 2023; 14(1) doi: 10.3390/ani14010055
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Haohao Chen, Yanfang Zhang, Yi Pan, Lin Wu, Wenqian Wang, Hui Zhang, Hongqiang Lou. Antibiotic-induced microbiome depletion promotes intestinal colonization by Campylobacter jejuni in miceBMC Microbiology 2024; 24(1) doi: 10.1186/s12866-024-03313-5
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Kavery Nivana Theethira Poonacha, Tomás G. Villa, Vicente Notario. The Interplay among Radiation Therapy, Antibiotics and the Microbiota: Impact on Cancer Treatment OutcomesAntibiotics 2022; 11(3) doi: 10.3390/antibiotics11030331
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Marina Rodrigues, Caroline Bertoncini-Silva, Anderson Gregorio Joaquim, Cássia Dias Machado, Leandra Náira Zambelli Ramalho, Daniela Carlos, Priscila Giacomo Fassini, Vivian Marques Miguel Suen. Beneficial effects of eugenol supplementation on gut microbiota and hepatic steatosis in high-fat-fed miceFood & Function 2022; 13(6) doi: 10.1039/D1FO03619J
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Zhiqiang Liu, Jianyang Sun, Aoya Shi, Chengyi Weng, Anjun Xiang, Mengna Hou, Mengjie Zhao, Chen Zheng, Yongxu Cheng, Xiaozhen Yang. Effects of dietary N-carbamylglutamate (NCG) supplementation on arginine biosynthesis, metabolism, digestion and mTOR signaling pathway gene expression in Eriocheir sinensisComparative Biochemistry and Physiology Part B: Biochemistry and Molecular Biology 2026; 281 doi: 10.1016/j.cbpb.2025.111178
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Eun Yeong Lim, Eun-Ji Song, Hee Soon Shin. Gut Microbiome as a Possible Cause of Occurrence and Therapeutic Target in Chronic Obstructive Pulmonary DiseaseJournal of Microbiology and Biotechnology 2023; 33(9) doi: 10.4014/jmb.2301.01033
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Andressa Liberal Santos, Cândido Carvalho Rodrigues, Miguel Oliveira, Thiago Lopes Rocha. Microbiome: A forgotten target of environmental micro(nano)plastics?Science of The Total Environment 2022; 822 doi: 10.1016/j.scitotenv.2022.153628
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Chaozhong Li, Zhengqing Liu, Siqian Yang, Wanrong Li, Bo Liang, Haoyu Chen, Yujia Ye, Fang Wang, Xiaoqing Liu, Yongliang Jiang, Haiying Wu, Yunzhu Peng, Zhaohui Meng. Causal relationship between gut microbiota, plasma metabolites, inflammatory cytokines and abdominal aortic aneurysm: a Mendelian randomization studyClinical and Experimental Hypertension 2024; 46(1) doi: 10.1080/10641963.2024.2390419
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Ilario Ferrocino, Kalliopi Rantsiou, Ryan McClure, Tanja Kostic, Rafael Soares Correa de Souza, Lene Lange, Jamie FitzGerald, Aicha Kriaa, Paul Cotter, Emmanuelle Maguin, Bettina Schelkle, Michael Schloter, Gabriele Berg, Angela Sessitsch, Luca Cocolin. The need for an integrated multi‐OMICs approach in microbiome science in the food systemComprehensive Reviews in Food Science and Food Safety 2023; 22(2) doi: 10.1111/1541-4337.13103
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Siwen Bao, Hao Wang, Wang Li, Likai Ji, Xiaochun Wang, Quan Shen, Shixing Yang, Chenglin Zhou, Wen Zhang. Dynamic alterations of the mice gut virome after Coxsackievirus B3 infectionJournal of Medical Virology 2022; 94(10) doi: 10.1002/jmv.27946
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Lina Lu, Fengxiao Li, Yuanyuan Gao, Shuhe Kang, Jia Li, Jinwang Guo. Microbiome in radiotherapy: an emerging approach to enhance treatment efficacy and reduce tissue injuryMolecular Medicine 2024; 30(1) doi: 10.1186/s10020-024-00873-0
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Tara R. Catron, Shaza Gaballah, Tamara Tal. Using Zebrafish to Investigate Interactions Between Xenobiotics and MicrobiotaCurrent Pharmacology Reports 2019; 5(6) doi: 10.1007/s40495-019-00203-7
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Rui Zheng, Pengju Wang, Baoping Cao, Minyao Wu, Xinyi Li, Hongyuan Wang, Lihong Chai. Intestinal response characteristic and potential microbial dysbiosis in digestive tract of Bufo gargarizans after exposure to cadmium and lead, alone or combinedChemosphere 2021; 271 doi: 10.1016/j.chemosphere.2020.129511
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Harpreet Kaur, Suba Nookala, Surjeet Singh, Santhosh Mukundan, Kumi Nagamoto-Combs, Colin Kelly Combs. Sex-Dependent Effects of Intestinal Microbiome Manipulation in a Mouse Model of Alzheimer’s DiseaseCells 2021; 10(9) doi: 10.3390/cells10092370
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Ravi Kant, Lakshya Chandra, Vipin Verma, Priyanshu Nain, Diego Bello, Siddharth Patel, Subash Ala, Rashmi Chandra, Mc Anto Antony. Gut microbiota interactions with anti-diabetic medications and pathogenesis of type 2 diabetes mellitusWorld Journal of Methodology 2022; 12(4): 246-257 doi: 10.5662/wjm.v12.i4.246
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Perrotta Giulio. The intestinal microbiota: Towards a multifactorial integrative model. Eubiosis and dysbiosis in morbid physical and psychological conditionsArchives of Clinical Gastroenterology 2021;  doi: 10.17352/2455-2283.000094
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Xinzhu Chen, Wen Yue, Zhongrong Li, Weigang Jin, Haihong Lin, Jing Liu. Cinnamaldehyde as a dietary modulator of gut microbiota and growth in broilers under low-protein feeding conditionsScientific Reports 2025; 15(1) doi: 10.1038/s41598-025-20576-8
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Walter J. Lukiw. The microbiome, microbial-generated proinflammatory neurotoxins, and Alzheimer's diseaseJournal of Sport and Health Science 2016; 5(4) doi: 10.1016/j.jshs.2016.08.008
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Yosra Doghri, Fabien Chetaneau, Moez Rhimi, Aicha Kriaa, Valérie Lalanne, Chantal Thorin, Emmanuelle Maguin, M. Yassine Mallem, Jean-Claude Desfontis, Frank T. Spradley. Sildenafil citrate long-term treatment effects on cardiovascular reactivity in a SHR experimental model of metabolic syndromePLOS ONE 2019; 14(11) doi: 10.1371/journal.pone.0223914
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Nan Wu, Xizhi Li, He Ma, Xue Zhang, Bin Liu, Yuan Wang, Qi Zheng, Xueli Fan. The role of the gut microbiota and fecal microbiota transplantation in neuroimmune diseasesFrontiers in Neurology 2023; 14 doi: 10.3389/fneur.2023.1108738
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Typhaine Le Doujet, Peik Haugen. The Microbiota of the Outer Gut Mucus Layer of the Migrating Northeast Arctic Cod (Gadus morhua) as Determined by Shotgun DNA SequencingMicroorganisms 2024; 12(11) doi: 10.3390/microorganisms12112204
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Iris Trefflich, Afraa Jabakhanji, Juliane Menzel, Michael Blaut, Andreas Michalsen, Alfonso Lampen, Klaus Abraham, Cornelia Weikert. Is a vegan or a vegetarian diet associated with the microbiota composition in the gut? Results of a new cross-sectional study and systematic reviewCritical Reviews in Food Science and Nutrition 2020; 60(17) doi: 10.1080/10408398.2019.1676697
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Hye-Jin Ku, You-Tae Kim, Ju-Hoon Lee. Microbiome Study of Initial Gut Microbiota from Newborn Infants to Children Reveals that Diet Determines Its Compositional DevelopmentJournal of Microbiology and Biotechnology 2020; 30(7) doi: 10.4014/jmb.2002.02042
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Marielen de Souza, Venessa Eeckhaut, Evy Goossens, Richard Ducatelle, Filip Van Nieuwerburgh, Karl Poulsen, Ana Angelita Sampaio Baptista, Ana Paula Frederico Rodrigues Loureiro Bracarense, Filip Van Immerseel. Guar gum as galactomannan source induces dysbiosis and reduces performance in broiler chickens and dietary β-mannanase restores the gut homeostasisPoultry Science 2023; 102(8) doi: 10.1016/j.psj.2023.102810
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Marija Dukić, Tijana Radonjić, Igor Jovanović, Marija Zdravković, Zoran Todorović, Nemanja Kraišnik, Bojana Aranđelović, Olga Mandić, Višeslav Popadić, Novica Nikolić, Slobodan Klašnja, Andrea Manojlović, Anica Divac, Jasna Gačić, Milica Brajković, Svetlana Oprić, Maja Popović, Marija Branković. Alcohol, Inflammation, and Microbiota in Alcoholic Liver DiseaseInternational Journal of Molecular Sciences 2023; 24(4) doi: 10.3390/ijms24043735
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Susan Cornell. Diabetes, Part 1: Disease State ReviewThe Senior Care Pharmacist 2022; 37(4) doi: 10.4140/TCP.n.2022.139
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Carolina Marques Lopes, Cristina Sofia de Jesus Monteiro, Ana Paula Duarte, Jorge Luiz dos Santos. Probiotics and Prebiotics for the Treatment of Irritable Bowel Syndrome—A Narrative ReviewJournal of Clinical Medicine 2024; 13(21) doi: 10.3390/jcm13216337
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Valeria Sagheddu, Vania Patrone, Francesco Miragoli, Edoardo Puglisi, Lorenzo Morelli. Infant Early Gut Colonization by Lachnospiraceae: High Frequency of Ruminococcus gnavusFrontiers in Pediatrics 2016; 4 doi: 10.3389/fped.2016.00057
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Emily M. Borsom, Keehoon Lee, Emily K. Cope. Do the Bugs in Your Gut Eat Your Memories? Relationship between Gut Microbiota and Alzheimer’s DiseaseBrain Sciences 2020; 10(11) doi: 10.3390/brainsci10110814
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Raluca Paula Popa, Alexandru Flaviu Tabaran. A Systematic Review of the Toxicokinetics of Micro- and Nanoplastics in Mammals Following Digestive ExposureApplied Sciences 2025; 15(11) doi: 10.3390/app15116135
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Thibault Cuisiniere, Annie Calvé, Gabriela Fragoso, Manon Oliero, Roy Hajjar, Emmanuel Gonzalez, Manuela M. Santos. Oral iron supplementation after antibiotic exposure induces a deleterious recovery of the gut microbiotaBMC Microbiology 2021; 21(1) doi: 10.1186/s12866-021-02320-0
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Barbara Zapała, Justyna Pustelnik, Alicja Dudek, Tomasz Milewicz. Differences in the Composition of Akkermansia Species and Families of Christensenellaceae and Ruminococcaceae Bacteria in the Gut Microbiota of Healthy Polish Women following a Typical Western DietDiversity 2023; 15(10) doi: 10.3390/d15101103
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Ivan Kushkevych, Michaela Dvořáková, Dani Dordevic, Bożena Futoma-Kołoch, Márió Gajdács, Lamiaa A. Al-Madboly, Mohamed Abd El-Salam. Advances in gut microbiota functions in inflammatory bowel disease: Dysbiosis, management, cytotoxicity assessment, and therapeutic perspectivesComputational and Structural Biotechnology Journal 2025; 27 doi: 10.1016/j.csbj.2025.02.026
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Gut microbiota and geriatric healthReviews and Research in Medical Microbiology 2025; 36(2) doi: 10.1097/MRM.0000000000000398
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Xin-Ying Lin, Hong-Bo Li, Duo-Duo Jiao, Lu Zhou, Bo Xu, Albert Juhasz, Lena Q. Ma, Dongmei Zhou. Balancing efficacy and safety: Inorganic and organic Fe-Ca Co-interventions reduce oral Cd bioavailability from rice and their impacts on gut healthJournal of Hazardous Materials 2026; 509 doi: 10.1016/j.jhazmat.2026.141983
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Xiao-jing Guo, Shi-xuan Dai, Jin-di Lou, Xu-xiang Ma, Xiao-juan Hu, Li-ping Tu, Ji Cui, Hao Lu, Tao Jiang, Jia-tuo Xu. Distribution characteristics of oral microbiota and its relationship with intestinal microbiota in patients with type 2 diabetes mellitusFrontiers in Endocrinology 2023; 14 doi: 10.3389/fendo.2023.1119201
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Gayatri Suresh, Madhu Nath, Abhishek Tiwari, Nabanita Halder, Rohan Chawla, Thirumurthy Velpandian. Gut microbiome dysbiosis in uveitis – mechanistic insights and emerging therapeutic strategiesExperimental Eye Research 2026; 270 doi: 10.1016/j.exer.2026.111073
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Md. Mizanur Rahaman, Phurpa Wangchuk, Subir Sarker. A systematic review on the role of gut microbiome in inflammatory bowel disease: Spotlight on virome and plant metabolitesMicrobial Pathogenesis 2025; 205 doi: 10.1016/j.micpath.2025.107608
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Shuai Wang, Wei Shi, Zhichu Huang, Nihong Zhou, Yanling Xie, Yu Tang, Fuliang Hu, Guangxu Liu, Huoqing Zheng. Complete digestion/biodegradation of polystyrene microplastics by greater wax moth (Galleria mellonella) larvae: Direct in vivo evidence, gut microbiota independence, and potential metabolic pathwaysJournal of Hazardous Materials 2022; 423 doi: 10.1016/j.jhazmat.2021.127213
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Chunjiang Zhang, Amanpreet Kaur Virk, Israr Khan, Haoran Qin. Gut Remediation of Environmental Pollutants2020;  doi: 10.1007/978-981-15-4759-1_2
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Douae Nihed Habiballah, Fanzhu Li, Lai Jiang. Immune metabolic restoration in systemic lupus erythematosus: the impact of gut microbiota, probiotics, and nutritional synergyFrontiers in Immunology 2025; 16 doi: 10.3389/fimmu.2025.1602235
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Deborah Adewole, Fisayo Akinyemi. Gut Microbiota Dynamics, Growth Performance, and Gut Morphology in Broiler Chickens Fed Diets Varying in Energy Density with or without Bacitracin Methylene Disalicylate (BMD)Microorganisms 2021; 9(4) doi: 10.3390/microorganisms9040787
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Amanda Cuevas-Sierra, Omar Ramos-Lopez, Jose I Riezu-Boj, Fermin I Milagro, J Alfredo Martinez. Diet, Gut Microbiota, and Obesity: Links with Host Genetics and Epigenetics and Potential ApplicationsAdvances in Nutrition 2019; 10 doi: 10.1093/advances/nmy078
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Vivien Deloule, Claire Boisset, Dalil Hannani, Antonia Suau, Audrey Le Gouellec, Jadwiga Chroboczek, Cyrille Botté, Yoshiki Yamaryo-Botté, Christine Chirat, Bertrand Toussaint. Prebiotic role of softwood hemicellulose in healthy mice modelJournal of Functional Foods 2020; 64 doi: 10.1016/j.jff.2019.103688
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Shayan Shahriar, Tamim Ahsan, Abira Khan, Sharif Akhteruzzaman, Saadlee Shehreen, Abu Ashfaqur Sajib. Aspartame, acesulfame K and sucralose- influence on the metabolism of Escherichia coliMetabolism Open 2020; 8 doi: 10.1016/j.metop.2020.100072
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Lina J. Suárez, Silie Arboleda, Nikola Angelov, Roger M. Arce. Oral Versus Gastrointestinal Mucosal Immune Niches in Homeostasis and AllostasisFrontiers in Immunology 2021; 12 doi: 10.3389/fimmu.2021.705206
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Xinhao Duan, Lei Zhang, Yi Liao, Zijing Lin, Changxin Guo, Sen Luo, Fu Wang, Zhen Zou, Zhijun Zeng, Chengzhi Chen, Jingfu Qiu. Semaglutide alleviates gut microbiota dysbiosis induced by a high-fat dietEuropean Journal of Pharmacology 2024; 969 doi: 10.1016/j.ejphar.2024.176440
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Sonakshi Rastogi, Sneha Mohanty, Sapna Sharma, Prabhanshu Tripathi. Possible role of gut microbes and host’s immune response in gut–lung homeostasisFrontiers in Immunology 2022; 13 doi: 10.3389/fimmu.2022.954339
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Mariantonia Logozzi, Rossella Di Raimo, Davide Mizzoni, Mauro Andreotti, Massimo Spada, Daniele Macchia, Stefano Fais. Beneficial Effects of Fermented Papaya Preparation (FPP®) Supplementation on Redox Balance and Aging in a Mouse ModelAntioxidants 2020; 9(2) doi: 10.3390/antiox9020144
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Sharlize Pedroza Matute, Sasitaran Iyavoo. Exploring the gut microbiota: lifestyle choices, disease associations, and personal genomicsFrontiers in Nutrition 2023; 10 doi: 10.3389/fnut.2023.1225120
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Katongo H. Mutengo, Sepiso K. Masenga, Aggrey Mweemba, Wilbroad Mutale, Annet Kirabo. Gut microbiota dependant trimethylamine N-oxide and hypertensionFrontiers in Physiology 2023; 14 doi: 10.3389/fphys.2023.1075641
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Dae Sung Kim. Therapeutic Response Prediction of Fecal Microbiota Transplantation for Patients with Irritable Bowel Syndrome: In Terms of Gut MicrobiotaThe Korean Journal of Gastroenterology 2022; 80(5) doi: 10.4166/kjg.2022.126
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Jorge Alberto Escoto, Beatriz Elina Martínez-Carrillo, Ninfa Ramírez-Durán, Hugo Ramírez-Saad, José Félix Aguirre-Garrido, Roxana Valdés-Ramos. Consumo crónico de edulcorantes en ratones y su efecto sobre el sistema inmunitario y la microbiota del intestino delgadoBiomédica 2021; 41(3) doi: 10.7705/biomedica.5806
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Marcello Candelli, Laura Franza, Rossella Cianci, Giulia Pignataro, Giuseppe Merra, Andrea Piccioni, Veronica Ojetti, Antonio Gasbarrini, Francesco Franceschi. The Interplay between Helicobacter pylori and Gut Microbiota in Non-Gastrointestinal Disorders: A Special Focus on AtherosclerosisInternational Journal of Molecular Sciences 2023; 24(24) doi: 10.3390/ijms242417520
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Błażej Misiak, Igor Łoniewski, Wojciech Marlicz, Dorota Frydecka, Agata Szulc, Leszek Rudzki, Jerzy Samochowiec. The HPA axis dysregulation in severe mental illness: Can we shift the blame to gut microbiota?Progress in Neuro-Psychopharmacology and Biological Psychiatry 2020; 102 doi: 10.1016/j.pnpbp.2020.109951
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Lea Gnatzy, George Ismailos, Maria Vertzoni, Christos Reppas. Managing the clinical effects of drug-induced intestinal dysbiosis with a focus to antibiotics: Challenges and opportunitiesEuropean Journal of Pharmaceutical Sciences 2023; 188 doi: 10.1016/j.ejps.2023.106510
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I. N. Zakharova, E. Yu. Borzova, M. A. Simakova. <i>Lactobacillus rhamnosus GG:</i> experience in pediatric gastroenterologyRossiyskiy Vestnik Perinatologii i Pediatrii (Russian Bulletin of Perinatology and Pediatrics) 2020; 64(6) doi: 10.21508/1027-4065-2019-64-6-20-29
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Jasminka Talapko, Aleksandar Včev, Tomislav Meštrović, Emina Pustijanac, Melita Jukić, Ivana Škrlec. Homeostasis and Dysbiosis of the Intestinal Microbiota: Comparing Hallmarks of a Healthy State with Changes in Inflammatory Bowel DiseaseMicroorganisms 2022; 10(12) doi: 10.3390/microorganisms10122405
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Saebom Yun, Kyu-Sung Choi, Heonhae Min, Yun Kee Jo, Sungho Jang. Development strategies for engineered live biotherapeutic products for metabolic diseasesCritical Reviews in Biotechnology 2026; 46(5) doi: 10.1080/07388551.2026.2653692
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Joshua Smyth, Julien Godet, Anisa Choudhary, Anubrata Das, Georgios V. Gkoutos, Animesh Acharjee. Microbiome‐Based Colon Cancer Patient Stratification and Survival AnalysisCancer Medicine 2024; 13(22) doi: 10.1002/cam4.70434
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Uchechukwu Edna Obianwuna, Nenna Agbai Kalu, Jing Wang, Haijun Zhang, Guanghai Qi, Kai Qiu, Shugeng Wu. Recent Trends on Mitigative Effect of Probiotics on Oxidative-Stress-Induced Gut Dysfunction in Broilers under Necrotic Enteritis Challenge: A ReviewAntioxidants 2023; 12(4) doi: 10.3390/antiox12040911
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Nisha Chandel, Pramod R. Somvanshi, Vivek Thakur. Characterisation of Indian gut microbiome for B-vitamin production and its comparison with Chinese cohortBritish Journal of Nutrition 2024; 131(4) doi: 10.1017/S0007114523002179
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Suprabhat Mukherjee, Nikhilesh Joardar, Subhasree Sengupta, Santi P. Sinha Babu. Gut microbes as future therapeutics in treating inflammatory and infectious diseases: Lessons from recent findingsThe Journal of Nutritional Biochemistry 2018; 61 doi: 10.1016/j.jnutbio.2018.07.010
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Xiufang Cui, Haiyang Wang, Ziping Ye, Yi Li, Xinyun Qiu, Hongjie Zhang. Fecal microbiota profiling in irritable bowel syndrome and inflammatory bowel disease patients with irritable bowel syndrome-type symptomsBMC Gastroenterology 2021; 21(1) doi: 10.1186/s12876-021-02015-w
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Xiaopeng Tang, Kai Zhang, Kangning Xiong. Fecal Microbial Changes in Response to Finishing Pigs Directly Fed With Fermented FeedFrontiers in Veterinary Science 2022; 9 doi: 10.3389/fvets.2022.894909
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Yonggan Sun, Qixing Nie. Dietary Fiber, Gut Microbiota, and Health2025;  doi: 10.1016/B978-0-443-21630-5.00013-7
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Kaede Kachi, Takaaki Sato, Maina Nagasawa, Isaac Cann, Haruyuki Atomi, Nicole R. Buan. The Lreu_1276 protein from Limosilactobacillus reuteri represents a third family of dihydroneopterin triphosphate pyrophosphohydrolases in bacteria Applied and Environmental Microbiology 2024; 90(7) doi: 10.1128/aem.00814-24
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Meiling Hong, Na Li, Lingyue Liang, Jiliang Zhang, Dongmei Wang, Haitao Shi, Li Ding. Change in gut histomorphology and microbiota in Chinese strip‐necked turtle hatchlingsAquaculture Research 2021; 52(6) doi: 10.1111/are.15119
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Deepak Joshi, Komal Chauhan, H. S. Oberoi, Dinesh Kumar, N. K. Taneja. Roles of human gut microbiota in metabolic, neurodegenerative, cardiovascular and gastrointestinal diseasesDiscover Biotechnology 2026; 3(1) doi: 10.1007/s44340-026-00053-2
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Gaetano Leto, Pietro Crispino, Antonello Viceconti, Valentina Camardo. Diabetes and Gastroparesis: New Concepts and InsightsDiabetology 2026; 7(5) doi: 10.3390/diabetology7050093
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Anna Duda-Madej, Szymon Viscardi, Jakub Piotr Łabaz, Ewa Topola, Wiktoria Szewczyk, Przemysław Gagat. Berberine in Bowel Health: Anti-Inflammatory and Gut Microbiota Modulatory EffectsInternational Journal of Molecular Sciences 2025; 26(24) doi: 10.3390/ijms262412021
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Tianshu Feng, Mian Gul Hilal, Yijie Wang, Rui Zhou, Qiaoling Yu, Jiapeng Qu, Huan Li. Differences in Gut Microbiome Composition and Antibiotic Resistance Gene Distribution between Chinese and Pakistani University Students from a Common Peer GroupMicroorganisms 2021; 9(6) doi: 10.3390/microorganisms9061152
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Pieter Van den Abbeele, Jonas Ghyselinck, Massimo Marzorati, Agusti Villar, Andrea Zangara, Carsten R. Smidt, Ester Risco. In Vitro Evaluation of Prebiotic Properties of a Commercial Artichoke Inflorescence Extract Revealed Bifidogenic EffectsNutrients 2020; 12(6) doi: 10.3390/nu12061552
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Evelyn Takyi, Khemlal Nirmalkar, James Adams, Rosa Krajmalnik-Brown. Interventions targeting the gut microbiota and their possible effect on gastrointestinal and neurobehavioral symptoms in autism spectrum disorderGut Microbes 2025; 17(1) doi: 10.1080/19490976.2025.2499580
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Manuel Garrido-Romero, Marina Díez-Municio, Francisco Javier Moreno. Exploring the Impact of Olive-Derived Bioactive Components on Gut Microbiota: Implications for Digestive HealthFoods 2025; 14(14) doi: 10.3390/foods14142413
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Titilayo Olotu, Jessica M. Ferrell. Lactobacillus sp. for the Attenuation of Metabolic Dysfunction-Associated Steatotic Liver Disease in MiceMicroorganisms 2024; 12(12) doi: 10.3390/microorganisms12122488
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Jin-Li Luo, Wen-Qi Jin, Li Wang, Qi Zhang, Yu Wang, Cui Wu, Yue Qu, Yu-Ting Peng, Li-Wei Sun, Chun-Li Piao. Jiedutongluotiaogan Formula Improves Pancreatic Dysfunction in db/db Mice through Modulating the Gut Microbiota-Short Chain Fatty Acids-NLR Family, Pyrin Domain–Containing Protein 3 InflammasomeWorld Journal of Traditional Chinese Medicine 2025; 11(2) doi: 10.4103/wjtcm.wjtcm_99_24
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Wen Li, Aimin Li. Exploring the causal relationship between gut microbiota and atopic dermatitis: A Mendelian randomization studyMedicine 2024; 103(52) doi: 10.1097/MD.0000000000040193
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C. Priscilla, Santosh Kumar, C.P. Girish Kumar, Sreejith Parameswaran, Pragasam Viswanathan, Rajesh Nachiappa Ganesh. Pre-transplant Ratio of Firmicutes/Bacteroidetes of Gut Microbiota as a Potential Biomarker of Allograft Rejection in Renal Transplant RecipientsJournal of Pure and Applied Microbiology 2022; 16(3) doi: 10.22207/JPAM.16.3.23
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G.D. Fadieienko, I.E. Kushnir, V.M. Chernova, T.A. Solomentseva, Ya.V. Nikiforova, O.H. Kurinna, V.Yu. Galchynska, T.N. Bondar. Dependence of Intestinal Microbiota Composition on Distribution and Activity of Adipose Tissue in Nonalcoholic Fatty Liver DiseaseMikrobiolohichnyi Zhurnal 2022; 84(3) doi: 10.15407/microbiolj84.03.051
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Shi-Qi Yao, Xiayin Yang, Ling-Ping Cen, Shaoying Tan. The Role of Gut Microbiota in Neuromyelitis Optica Spectrum DisorderInternational Journal of Molecular Sciences 2024; 25(6) doi: 10.3390/ijms25063179
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Xin Wang, Dongmei Jiang, Xiaoguang An, Shuo Li, Yuxin Qi, Yujie Yang, Zelong Wang, Qian Sun, Weikang Ling, Chengweng Ji, Yuxuan Qi, Hengyong Xu, Chunchun Han, Hua Zhao, Bo Kang. Effects of wheat germ diet on intestinal antioxidant capacity, immunological function and gut microbiota of Sichuan white geeseFrontiers in Microbiology 2024; 15 doi: 10.3389/fmicb.2024.1435454
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Francesco Crudo, Georg Aichinger, Jovana Mihajlovic, Elisabeth Varga, Luca Dellafiora, Benedikt Warth, Chiara Dall’Asta, David Berry, Doris Marko. In vitro interactions of Alternaria mycotoxins, an emerging class of food contaminants, with the gut microbiota: a bidirectional relationshipArchives of Toxicology 2021; 95(7) doi: 10.1007/s00204-021-03043-x
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Kenneth Alibek, Luiza Niyazmetova, Sean Farmer, Terence Isakov. Persistent Inflammation Initiated by TORCH Infections and Dysbiotic Microbiome in Autism Spectrum Disorders: A Prospect for Future InterventionsResearch Ideas and Outcomes 2022; 8 doi: 10.3897/rio.8.e91179
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Yue Yin, Jian Wan, Jingmin Yu, Kaichun Wu. Molecular Pathogenesis of Colitis-associated Colorectal Cancer: Immunity, Genetics, and Intestinal MicroecologyInflammatory Bowel Diseases 2023; 29(10) doi: 10.1093/ibd/izad081
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Marcos Antônio Ferreira Caetano, Patricia Castelucci. Role of short chain fatty acids in gut health and possible therapeutic approaches in inflammatory bowel diseasesWorld Journal of Clinical Cases 2022; 10(28): 9985-10003 doi: 10.12998/wjcc.v10.i28.9985
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Mrunalini Lotankar, Noora Houttu, Kati Mokkala, Kirsi Laitinen. Diet–Gut Microbiota Relations: Critical Appraisal of Evidence From Studies Using MetagenomicsNutrition Reviews 2025; 83(7) doi: 10.1093/nutrit/nuae192
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Xiao-Juan Yang, Dan Liu, Hong-Yan Ren, Xiao-Ya Zhang, Jun Zhang, Xiao-Jun Yang. Effects of sepsis and its treatment measures on intestinal flora structure in critical care patientsWorld Journal of Gastroenterology 2021; 27(19): 2376-2393 doi: 10.3748/wjg.v27.i19.2376
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Anna Elizabeth Wittwer, Simon Gardner Lee, Chaminda Senaka Ranadheera. Potential associations between organic dairy products, gut microbiome, and gut health: A reviewFood Research International 2023; 172 doi: 10.1016/j.foodres.2023.113195
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Rogers A. Ñahui Palomino, Christophe Vanpouille, Paolo E. Costantini, Leonid Margolis, Julia Oh. Microbiota–host communications: Bacterial extracellular vesicles as a common languagePLOS Pathogens 2021; 17(5) doi: 10.1371/journal.ppat.1009508
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Na-Ri Choi, Seok-Jae Ko, Joo-Hyun Nam, Woo-Gyun Choi, Jong-Hwan Lee, Seung-Yeol Nah, Jae-Woo Park, Byung-Joo Kim. Study on the Therapeutic Effects and Mechanisms of Gintonin in Irritable Bowel Syndrome and Its Relationship with TRPV1, TRPV4, and NaV1.5Pharmaceuticals 2024; 17(9) doi: 10.3390/ph17091170
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Concetta Panebianco, Angelo Andriulli, Valerio Pazienza. Pharmacomicrobiomics: exploiting the drug-microbiota interactions in anticancer therapiesMicrobiome 2018; 6(1) doi: 10.1186/s40168-018-0483-7
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Zhipeng Li, Xiyang Ke, Dan Zuo, Zhicheng Wang, Fang Fang, Bo Li. New Insights into the Relationship between Gut Microbiota and Radiotherapy for CancerNutrients 2022; 15(1) doi: 10.3390/nu15010048
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Hamsika Moparty, Manya Pala, Sahaja Ampolu, Swapna Gayam. Diet for Human and Planetary Health: Why We Should Consider Limiting Meat?International Journal of Environmental Research and Public Health 2025; 22(10) doi: 10.3390/ijerph22101499
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Ningning Li, Liwei Gao, Yuping Ge, Lin Zhao, Yingyi Wang, Chunmei Bai. Impact of the gut microbiome on response and toxicity to chemotherapy in advanced esophageal cancerHeliyon 2024; 10(12) doi: 10.1016/j.heliyon.2024.e32770
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Manon Jardou, Clarisse Brossier, Pierre Marquet, Nicolas Picard, Anne Druilhe, Roland Lawson. Solid organ transplantation and gut microbiota: a review of the potential immunomodulatory properties of short-chain fatty acids in graft maintenanceFrontiers in Cellular and Infection Microbiology 2024; 14 doi: 10.3389/fcimb.2024.1342354
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Julia Groestlinger, Carina Seidl, Elisabeth Varga, Giorgia Del Favero, Doris Marko. Combinatory Exposure to Urolithin A, Alternariol, and Deoxynivalenol Affects Colon Cancer Metabolism and Epithelial Barrier Integrity in vitroFrontiers in Nutrition 2022; 9 doi: 10.3389/fnut.2022.882222
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Hanghai Zhou, Zhendong Li, Zhou Wu, Lihua Zou, Hong Sun, Hua Li, Xin Wang, Yuan Wang, Junwei Jin, Thilo Hofmann, Jiangwu Tang. Zinc accumulation as a primary contributor to co-exposure toxicity with 6PPD-quinone in earthworms: Multi-level evidenceJournal of Hazardous Materials 2026; 514 doi: 10.1016/j.jhazmat.2026.142749
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Debora Compare, Alba Rocco, Marco Sanduzzi Zamparelli, Gerardo Nardone. The Gut Bacteria-Driven Obesity DevelopmentDigestive Diseases 2016; 34(3) doi: 10.1159/000443356
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Tomasz Gosiewski, Tomasz Mróz, Dorota Ochońska, Wojciech Pabian, Malgorzata Bulanda, Monika Brzychczy-Wloch. A study of the effects of therapeutic doses of ionizing radiation in vitro on Lactobacillus isolates originating from the vagina - a pilot studyBMC Microbiology 2016; 16(1) doi: 10.1186/s12866-016-0716-5
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Arun Jose, Senu Apewokin, Walaa E. Hussein, Nicholas J. Ollberding, Jean M. Elwing, David B. Haslam. A unique gut microbiota signature in pulmonary arterial hypertension: A pilot studyPulmonary Circulation 2022; 12(1) doi: 10.1002/pul2.12051
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Yanping Wang, Yang Zhang, Jingnan Yang, Haoran Li, Jinju Wang, Weitao Geng. Lactobacillus plantarum MA2 Ameliorates Methionine and Choline-Deficient Diet Induced Non-Alcoholic Fatty Liver Disease in Rats by Improving the Intestinal Microecology and Mucosal BarrierFoods 2021; 10(12) doi: 10.3390/foods10123126
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Deniz Ilgun Gurel, Aikaterini Anagnostou, Alessandro Fiocchi, Chinthrajah Sharon, Umit Sahiner, Sayantani Sindher, Stefania Arasi. New approaches in childhood IgE-mediated food allergy treatmentCurrent Opinion in Allergy & Clinical Immunology 2025; 25(2) doi: 10.1097/ACI.0000000000001058
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Ward J. van den Hoogen, Jon D. Laman, Bert A. ’t Hart. Modulation of Multiple Sclerosis and Its Animal Model Experimental Autoimmune Encephalomyelitis by Food and Gut MicrobiotaFrontiers in Immunology 2017; 8 doi: 10.3389/fimmu.2017.01081
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Zhijie Huang, Yisheng Huang, Jun Chen, Zhengming Tang, Yuanxin Chen, Hongyu Liu, Mingshu Huang, Ling Qing, Li Li, Qin Wang, Bo Jia. The role and therapeutic potential of gut microbiome in severe burnFrontiers in Cellular and Infection Microbiology 2022; 12 doi: 10.3389/fcimb.2022.974259
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Santiago Rosas-Plaza, Luisa Mainou, Gabriela Delgado, Rosario Morales, Ariana Aguilar-Romero, Ana E. Escalante, Rene Cerritos, Dario Piombino-Mascali. Microbiome characterization of a pre-Hispanic man from Zimapán, Mexico: Insights into ancient gut microbial communitiesPLOS One 2025; 20(10) doi: 10.1371/journal.pone.0331137
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Sarah Altajar, Alan Moss. Inflammatory Bowel Disease Environmental Risk Factors: Diet and Gut MicrobiotaCurrent Gastroenterology Reports 2020; 22(12) doi: 10.1007/s11894-020-00794-y
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Exploration of the Characteristics of Intestinal Microbiota and Metabolomics in Different Rat Models of Mongolian MedicineEvidence-Based Complementary and Alternative Medicine 2021; 2021 doi: 10.1155/2021/5532069
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Angela Dziedzic, Karina Maciak, Katarzyna Bliźniewska-Kowalska, Małgorzata Gałecka, Weronika Kobierecka, Joanna Saluk. The Power of Psychobiotics in Depression: A Modern Approach through the Microbiota–Gut–Brain Axis: A Literature ReviewNutrients 2024; 16(7) doi: 10.3390/nu16071054
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Arnau Rocabert, Joan Martín-Pérez, Laia Pareras, Raquel Egea, Mohamed Alaraby, Jordi Manuel Cabrera-Gumbau, Iris Sarmiento, Jaime Martínez-Urtaza, Laura Rubio, Irene Barguilla, Ricard Marcos, Alba García-Rodríguez, Alba Hernández. Nanoplastic exposure affects the intestinal microbiota of adult Drosophila fliesScience of The Total Environment 2025; 980 doi: 10.1016/j.scitotenv.2025.179545
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Zhihua Liu, Jiahao Zhao, Shuyuan Yang, Yu Zhang, Lu Song, Na Wu, Zhenguo Liu. Network Pharmacology and Absolute Bacterial Quantification-Combined Approach to Explore the Mechanism of Tianqi Pingchan Granule Against 6-OHDA-Induced Parkinson’s Disease in RatsFrontiers in Nutrition 2022; 9 doi: 10.3389/fnut.2022.836500
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Muzahidul I. Anik, Niaz Mahmud, Abdullah Al Masud, Md Ishak Khan, Md Nurul Islam, Shihab Uddin, M. Khalid Hossain. Role of Reactive Oxygen Species in Aging and Age-Related Diseases: A ReviewACS Applied Bio Materials 2022; 5(9) doi: 10.1021/acsabm.2c00411
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Yue-Xing Yuan, Shou-Rui Feng, Ai-Yu Wu, Wei-Hao Wu, Pan Tian, Ai-Zhen Chen, Xiao-Mei Ma, Ling-Ling Huang, Lian Yu. Influence of TNF-α Inhibitors on Gut Microbiota and Immune Modulation in Treating Ankylosing Spondylitis: Insights into Therapeutic Mechanisms and Clinical ImplicationsJournal of Inflammation Research 2024;  doi: 10.2147/JIR.S496991
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Bingbing Guo, Bo Yang, Xiaoyang Pang, Tianpeng Chen, Feng Chen, Ka-Wing Cheng. Fucoxanthin modulates cecal and fecal microbiota differently based on dietFood & Function 2019; 10(9) doi: 10.1039/C9FO01018A
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Yujiao Liang, Mengyao Liu, Yingxue Cheng, Xinchang Wang, Weijie Wang. Prevention and treatment of rheumatoid arthritis through traditional Chinese medicine: role of the gut microbiotaFrontiers in Immunology 2023; 14 doi: 10.3389/fimmu.2023.1233994
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Kanan Alshammari, Faizah M. Alotaibi, Futoon Alsugheir, Mohammad Aldawoud, Ashwaq Alolayan, Mohammed Ahmad Algarni, Fouad Sabatin, Mohammad F. Mohammad, Abdulaziz Alosaimi, Faisal M. Sanai, Hassan Odah, Ahmed Saleh Alshehri, Omar S. Aldibasi, Samah Alrehaily, Abdullah S. Al Saleh. Antibiotic Exposure Concurrently with Anti-PD1 Blockade Therapy Reduces Overall Survival in Patients with Child–Pugh Class A Advanced Hepatocellular CarcinomaCancers 2023; 16(1) doi: 10.3390/cancers16010133
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Huimin Zhang, Zhenxia Xu, Wenchao Chen, Fenghong Huang, Shouwen Chen, Xu Wang, Chen Yang. Algal oil alleviates antibiotic-induced intestinal inflammation by regulating gut microbiota and repairing intestinal barrierFrontiers in Nutrition 2023; 9 doi: 10.3389/fnut.2022.1081717
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Komal Marwaha, Ryan Cain, Katherine Asmis, Katya Czaplinski, Nathan Holland, Darly C. Ghislaine Mayer, Jessica Chacon. Exploring the complex relationship between psychosocial stress and the gut microbiome: implications for inflammation and immune modulationJournal of Applied Physiology 2025; 138(2) doi: 10.1152/japplphysiol.00652.2024
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Ana Bačić, Jelisaveta Gavrilović, Mirjana Rajilić-Stojanović. Polyphenols as a new class of prebiotics for gut microbiota manipulationArhiv za farmaciju 2023; 73(6) doi: 10.5937/arhfarm73-46900
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Yonggan Sun, Shanshan Zhang, Qixing Nie, Huijun He, Huizi Tan, Fang Geng, Haihua Ji, Jielun Hu, Shaoping Nie. Gut firmicutes: Relationship with dietary fiber and role in host homeostasisCritical Reviews in Food Science and Nutrition 2023; 63(33) doi: 10.1080/10408398.2022.2098249
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Zhengli Wang, Jianjun Zhu, Yan Ma, Tingting Liu, Shuaihu Chen, Mingyang Gao, Sijia Wang, Jungang Wang, Hong Shen. Effects of Isalo scorpion cytotoxic peptide on growth, immune performance, and intestinal flora of yellow-feathered broilersFrontiers in Veterinary Science 2024; 11 doi: 10.3389/fvets.2024.1511680
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M. Salavrakos, S. Leclercq, P. De Timary, G. Dom. Microbiome and substances of abuseProgress in Neuro-Psychopharmacology and Biological Psychiatry 2021; 105 doi: 10.1016/j.pnpbp.2020.110113
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Zihao Zhang, Jiayi Xiong, Lin Chen, Gang Wang, Ruomeng Dong, Fengxuan Wang, Yingjie Huang, Xia Meng, Tiantian Li, Qing Gu, Ping Li. Potential probiotic characteristics and genomic analysis of a new folate‐producing lactic acid bacteria Lactiplantibacillus plantarum ZFM55Journal of the Science of Food and Agriculture 2024; 104(12) doi: 10.1002/jsfa.13552
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Bufu Tang, Tong Jiang, Yaling Lin, Wei Zhang, Hongjie Fan, Minjie Yang, Bingzhe Li, Yaozu Liu, Changyu Li, Xuran Jin, Wen Zhang, Zhiping Yan, Qianqian Zhao, Xuefeng Kan, Xudong Qu. Targeting the intratumoral microbiota to overcome cancer immunotherapy resistanceInterdisciplinary Medicine 2026;  doi: 10.1002/inmd.70155
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Lijing Huang, Yanchu Zheng, Shaohua Feng, Bangyuan Wu, Li Chen, Xiaoqin Xu, Bin Wang, Wanhong Li, Caiquan Zhou, Long Zhang. Seasonal Changes and Age-Related Effects on the Intestinal Microbiota of Captive Chinese Monals (Lophophorus lhuysii)Animals 2024; 14(23) doi: 10.3390/ani14233418
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María Antonieta Tuna, José Roberto Salazar. Is Microbiota Making You Fat? From Microbiota and Immune System to Obesity and DiseaseCurrent Tropical Medicine Reports 2017; 4(3) doi: 10.1007/s40475-017-0112-8
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Cinzia Myriam Calabrese, Alessia Valentini, Giorgio Calabrese. Gut Microbiota and Type 1 Diabetes Mellitus: The Effect of Mediterranean DietFrontiers in Nutrition 2021; 7 doi: 10.3389/fnut.2020.612773
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Sonakshi Rastogi, Sneha Mohanty, Prabhanshu Tripathi. Autophagy and Metabolism2022;  doi: 10.1016/B978-0-323-99879-6.00007-9
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Celia Carbonne, Sead Chadi, Camille Kropp, Lise Molimard, Florian Chain, Philippe Langella, Rebeca Martin. Ligilactobacillus salivarius CNCM I-4866, a potential probiotic candidate, shows anti-inflammatory properties in vitro and in vivoFrontiers in Microbiology 2023; 14 doi: 10.3389/fmicb.2023.1270974
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Chaowei Fu, Yu Zhao, Xiang Zhou, Jing Lv, Shengkai Jin, Yuhua Zhou, Fengping Liu, Ninghan Feng. Gut microbiota and interstitial cystitis: exploring the gut-bladder axis through mendelian randomization, biological annotation and bulk RNA sequencingFrontiers in Immunology 2024; 15 doi: 10.3389/fimmu.2024.1395580
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Anna Duda-Madej, Joanna Kozłowska, Dagmara Baczyńska, Paweł Krzyżek. Ether Derivatives of Naringenin and Their Oximes as Factors Modulating Bacterial AdhesionAntibiotics 2023; 12(6) doi: 10.3390/antibiotics12061076
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Elisa M. Sinibaldi, Ana María Zelaya. Is the Diet Industry Disrupting Your Microbiota?Current Tropical Medicine Reports 2019; 6(4) doi: 10.1007/s40475-019-00189-8
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Maria Chiara Ditto, Simone Parisi, Gianpiero Landolfi, Richard Borrelli, Cristina Realmuto, Annacarla Finucci, Gian Paolo Caviglia, Davide Giuseppe Ribaldone, Marco Astegiano, Anna Zanetti, Greta Carrara, Carlo Alberto Scirè, Marco Antivalle, Piercarlo Sarzi-Puttini, Enrico Fusaro. Intestinal microbiota changes induced by TNF-inhibitors in IBD-related spondyloarthritisRMD Open 2021; 7(3) doi: 10.1136/rmdopen-2021-001755
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Kerri L. Glassner, Bincy P. Abraham, Eamonn M.M. Quigley. The microbiome and inflammatory bowel diseaseJournal of Allergy and Clinical Immunology 2020; 145(1) doi: 10.1016/j.jaci.2019.11.003
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Xiao-Bo Liu, Zi-Ye Gao, Wen Xu, Jian-Chao Meng, Jian-Rui Zhou, Hui Wen, Qiang Tong, Shui-Xiang He. Tissue source may affect the esophageal flora in patients with esophageal squamous cell carcinomaOncology Letters 2024; 29(1) doi: 10.3892/ol.2024.14802
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Junwen Zhu, Lan He. The Modulatory Effects of Curcumin on the Gut Microbiota: A Potential Strategy for Disease Treatment and Health PromotionMicroorganisms 2024; 12(4) doi: 10.3390/microorganisms12040642
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Flavio De Maio, Giacomo Grotti, Francesco Mariani, Danilo Buonsenso, Giulia Santarelli, Delia Mercedes Bianco, Brunella Posteraro, Maurizio Sanguinetti, Claudia Rendeli. Profiling the Urobiota in a Pediatric Population with Neurogenic Bladder Secondary to Spinal DysraphismInternational Journal of Molecular Sciences 2023; 24(9) doi: 10.3390/ijms24098261
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Leqi Lin, Jacob George, Guozhen Liu. Biomarker Quantification of Gut Dysbiosis-Derived Inflammation: A ReviewJournal of Inflammation Research 2025;  doi: 10.2147/JIR.S539155
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Sonia Mirjam Rizzo, Giulia Alessandri, Gabriele Andrea Lugli, Federico Fontana, Chiara Tarracchini, Leonardo Mancabelli, Alice Viappiani, Massimiliano G. Bianchi, Ovidio Bussolati, Douwe van Sinderen, Marco Ventura, Francesca Turroni, Giordano Rampioni. Exploring Molecular Interactions between Human Milk Hormone Insulin and BifidobacteriaMicrobiology Spectrum 2023; 11(3) doi: 10.1128/spectrum.00665-23
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Yohan Joe Roy, Yeshaa Mirani, Jinoy Raju, Ahmed Hashim Mohamed Ali, Ashlin Anna Gigi, Ayomide Fawunmi, Joel Saju Kombara. The Role of Colonic Microbiota in Constipation Predominant Irritable Bowel Syndrome: A Literature ReviewBritish Journal of Hospital Medicine 2025; 86(10) doi: 10.12968/hmed.2025.0184
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Siliang Zhang, Aixia Chen, Hongzhang Deng, Ling Jiang, Xiaoli Liu, Lihong Chai. Intestinal response of Rana chensinensis larvae exposed to Cr and Pb, alone and in combinationEcotoxicology and Environmental Safety 2023; 255 doi: 10.1016/j.ecoenv.2023.114774
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Wu Xiaoming, Liu Jing, Pan Yuchen, Liu Huili, Zhang Miao, Shu Jing. Characteristics of the vaginal microbiomes in prepubertal girls with and without vulvovaginitisEuropean Journal of Clinical Microbiology & Infectious Diseases 2021; 40(6) doi: 10.1007/s10096-021-04152-2
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TianRong Ma, XiaoLei Xue, Hui Tian, XinXiu Zhou, JunKe Wang, ZhiWen Zhao, MingFei Wang, JiYuan Song, RenXiang Feng, Leping Li, Changqing Jing, Feng Tian. Effect of the gut microbiota and their metabolites on postoperative intestinal motility and its underlying mechanismsJournal of Translational Medicine 2023; 21(1) doi: 10.1186/s12967-023-04215-2
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Edwin K. Jackson, Stevan P. Tofovic, Yuanyuan Chen, Lori A. Birder. 8-Aminopurines in the Cardiovascular and Renal Systems and BeyondHypertension 2023; 80(11) doi: 10.1161/HYPERTENSIONAHA.123.20582
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Dana Šumilo, Krishnarajah Nirantharakumar, Brian H Willis, Gavin M Rudge, James Martin, Krishna Gokhale, Rasiah Thayakaran, Nicola J Adderley, Joht Singh Chandan, Kelvin Okoth, Isobel M Harris, Ruth Hewston, Magdalena Skrybant, Jonathan J Deeks, Peter Brocklehurst. Long-term impact of pre-incision antibiotics on children born by caesarean section: a longitudinal study based on UK electronic health recordsHealth Technology Assessment 2022; 26(30) doi: 10.3310/ZYZC8514
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Ioanna Aggeletopoulou, Markos Marangos, Stelios F. Assimakopoulos, Athanasia Mouzaki, Konstantinos Thomopoulos, Christos Triantos. Vitamin D and MicrobiomeThe American Journal of Pathology 2023; 193(6) doi: 10.1016/j.ajpath.2023.02.004
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Hadi Nasiri, Zahra Valedkarimi, Morteza Akbari. Gut–brain–immune axis implications for mental health and diseaseMolecular and Cellular Biochemistry 2025; 480(10) doi: 10.1007/s11010-025-05325-9
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Frederik K L Spijkervet, Michael T Brennan, Douglas E Peterson, Max J H Witjes, Arjan Vissink. Research Frontiers in Oral Toxicities of Cancer Therapies: Osteoradionecrosis of the JawsJNCI Monographs 2019; 2019(53) doi: 10.1093/jncimonographs/lgz006
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Caitlin R. Gabor, Melissa Villatoro-Castañeda, Camila Carlos-Shanley, Nikolett Ujhegyi, Veronika Bókony. Gut Bacterial Communities Vary across Habitats and Their Diversity Increases with Increasing Glucocorticoids in Toad TadpolesDiversity 2022; 15(1) doi: 10.3390/d15010023
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Nairita Ahsan Faruqui, Durdana Hossain Prium, Sadrina Afrin Mowna, Md. Asad Ullah, Yusha Araf, Bishajit Sarkar, Umme Salma Zohora, Mohammad Shahedur Rahman. Gut Microorganisms and Neurological Disease PerspectivesFuture Neurology 2021; 16(1) doi: 10.2217/fnl-2020-0026
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Rui Li, Kang Feng, Yu Du, Xuebin Fan, Yaqin Zhang, Chenli Wang, Jingdi Zhang, Sheraz Ahmad, Rafique Amna, Ci Liu, Ruiyan Niu, Zilong Sun. Identification of potential natural compounds to relieve deoxynivalenol-induced intestinal damage based on bioinformatics and reverse network pharmacologyFood and Chemical Toxicology 2025; 202 doi: 10.1016/j.fct.2025.115551
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Amy Botta, Nicole G. Barra, Nhat Hung Lam, Samantha Chow, Kostas Pantopoulos, Jonathan D. Schertzer, Gary Sweeney. Iron Reshapes the Gut Microbiome and Host MetabolismJournal of Lipid and Atherosclerosis 2021; 10(2) doi: 10.12997/jla.2021.10.2.160
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Mariana F. Fernández, Iris Reina-Pérez, Juan Manuel Astorga, Andrea Rodríguez-Carrillo, Julio Plaza-Díaz, Luis Fontana. Breast Cancer and Its Relationship with the MicrobiotaInternational Journal of Environmental Research and Public Health 2018; 15(8) doi: 10.3390/ijerph15081747
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Neel Jayesh Shah, Onkar C. Swami. Role of Probiotics in Diabetes: A Review of Their Rationale and EfficacyEMJ Diabetes 2017;  doi: 10.33590/emjdiabet/10310327
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Xuan Liu, Zhenhua Ma, Yanfei Wang, Li Li, Hao Jia, Lihuan Zhang. Compound probiotics can improve intestinal health by affecting the gut microbiota of broilersJournal of Animal Science 2023; 101 doi: 10.1093/jas/skad388
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Lalit Bharadia, Neha Agrawal, Nandan Joshi. Development and Functions of the Infant Gut Microflora: Westernvs. Indian InfantsInternational Journal of Pediatrics 2020; 2020 doi: 10.1155/2020/7586264
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Fangjia Zhao, Min Li, Mingyue Luo, Meng Zhang, Yahong Yuan, Haili Niu, Tianli Yue. The dose-dependent mechanism behind the protective effect of lentinan against acute alcoholic liver injury via proliferating intestinal probioticsFood & Function 2024; 15(19) doi: 10.1039/D4FO02256D
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Pui Yin Wong, Carmen Yip, Daniel A. Lemberg, Andrew S. Day, Steven T. Leach. Evolution of a Pathogenic MicrobiomeJournal of Clinical Medicine 2023; 12(22) doi: 10.3390/jcm12227184
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Ligang Liu, Anlin Wang, Hekai Shi, Heqing Tao, Milap C. Nahata. Efficacy and safety of probiotics and synbiotics for functional constipation in children: A systematic review and meta-analysis of randomized clinical trialsClinical Nutrition 2023; 42(10) doi: 10.1016/j.clnu.2023.08.015
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Asiya Nazir, Fathima Hasnain Nadeem Hussain, Afsheen Raza. Advancing microbiota therapeutics: the role of synthetic biology in engineering microbial communities for precision medicineFrontiers in Bioengineering and Biotechnology 2024; 12 doi: 10.3389/fbioe.2024.1511149
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Zhipeng Li, Qixing Nie. Dietary Fiber, Gut Microbiota, and Health2025;  doi: 10.1016/B978-0-443-21630-5.00011-3
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Patrick G. Gavin, Justin Wong, Dorothy Loo, Danny Zipris, Michelle M. Hill, Emma E. Hamilton-Williams. Metaproteomic sample preparation methods bias the recovery of host and microbial proteins according to taxa and cellular compartmentJournal of Proteomics 2021; 240 doi: 10.1016/j.jprot.2021.104219
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Mizuho Ito, Miori Tanaka, Midori Date, Saeko Nagao, Kumiko Miura, Katsumi Mizuno. Microbiota in human breast milk: Noninfectious mastitis versus without mastitisPediatrics International 2023; 65(1) doi: 10.1111/ped.15677
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Sara Alvarez-Gonzalez, Jose Rodriguez-Fernandez, Ana Belen Porto-Pazos, Alejandro Pazos, Francisco Cedron. First Multiplatform Application for Pharmacies in Spain, Which Guides the Prescription of Probiotics According to PathologyApplied Sciences 2021; 11(4) doi: 10.3390/app11041572
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Omolanke T. Oyedemi, Sophie Shaw, Jennifer C. Martin, Funmilola A. Ayeni, Karen P. Scott, Erwin G Zoetendal. Changes in the gut microbiota of Nigerian infants within the first year of lifePLOS ONE 2022; 17(3) doi: 10.1371/journal.pone.0265123
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Jérôme Laisney, Mireille Chevallet, Caroline Fauquant, Camille Sageot, Yohann Moreau, Daniela Predoi, Nathalie Herlin-Boime, Colette Lebrun, Isabelle Michaud-Soret. Ligand-Promoted Surface Solubilization of TiO2 Nanoparticles by the Enterobactin Siderophore in Biological MediumBiomolecules 2022; 12(10) doi: 10.3390/biom12101516
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Chiara Ferrario, Christian Milani, Leonardo Mancabelli, Gabriele Andrea Lugli, Sabrina Duranti, Marta Mangifesta, Alice Viappiani, Francesca Turroni, Abelardo Margolles, Patricia Ruas-Madiedo, Douwe van Sinderen, Marco Ventura, Julian Marchesi. Modulation of theeps-ome transcription of bifidobacteria through simulation of human intestinal environmentFEMS Microbiology Ecology 2016; 92(4) doi: 10.1093/femsec/fiw056
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Zhenlu Wang, Jiang Zhou, Junyi Li, Jixing Zou, Lanfen Fan. The immune defense response of Pacific white shrimp (Litopenaeus vannamei) to temperature fluctuationFish & Shellfish Immunology 2020; 103 doi: 10.1016/j.fsi.2020.04.053
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Ron Gilat, Allen A. Yazdi, Alexander C. Weissman, Kaitlyn M. Joyce, Fatima A. Bouftas, Sarah A. Muth, Emanuele Chisari, Noam Shohat, Brian J. Cole. The Gut Microbiome and Joint Microbiome Show Alterations in Patients With Knee Osteoarthritis Versus Controls: A Systematic ReviewArthroscopy 2025; 41(4) doi: 10.1016/j.arthro.2024.05.010
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Bilal El-Mansoury, Kamal Smimih, Youssef Ait Hamdan, Abdelaati El Khiat, Samia Elouali, Hanane El Fatimi, Ahmed Draoui, Omar El Hiba, Arumugam Radhakrishnan Jayakumar. Ecological and Evolutionary Perspectives on Infections and MorbidityAdvances in Human Services and Public Health 2023;  doi: 10.4018/978-1-7998-9414-8.ch008
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Yida Xu, Yongli Ye, Jia-Sheng Wang, Lili Tang, Xiao Ning, Xiulan Sun. Effects of chronic ethanol exposure on citrinin metabolism and gut-liver-kidney-brain related injuries in miceFood Bioscience 2024; 62 doi: 10.1016/j.fbio.2024.105514
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Seika Hashimoto-Hill, Theresa Alenghat. Inflammation-Associated Microbiota Composition Across Domestic AnimalsFrontiers in Genetics 2021; 12 doi: 10.3389/fgene.2021.649599
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Victoria Bell, Jorge Ferrão, Lígia Pimentel, Manuela Pintado, Tito Fernandes. One Health, Fermented Foods, and Gut MicrobiotaFoods 2018; 7(12) doi: 10.3390/foods7120195
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Francesca Albonico, Claudia Barelli, Davide Albanese, Mattia Manica, Erika Partel, Fausta Rosso, Silvia Ripellino, Massimo Pindo, Claudio Donati, Alfonso Zecconi, Michele Mortarino, Heidi C. Hauffe, Alex V. Chaves. Raw milk and fecal microbiota of commercial Alpine dairy cows varies with herd, fat content and dietPLOS ONE 2020; 15(8) doi: 10.1371/journal.pone.0237262
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You Lv, Zi Yan, Xue Zhao, Xiaokun Gang, Guangyu He, Lin Sun, Zhuo Li, Guixia Wang. The effects of gut microbiota on metabolic outcomes in pregnant women and their offspringFood & Function 2018; 9(9) doi: 10.1039/C8FO00601F
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Tianhu Shan, Jiawen Wang, Yanyang Liu, Huaqi Zhang, Zhe Zhang, Lanwei Zhang, Hui Liang, Xi Liang. FXR‐Mediated Atherosclerosis Alleviation by B. animalis F1‐7 Through Bile Acid Metabolism‐Driven Gut–Liver Axis ModulationFood Frontiers 2026; 7(2) doi: 10.1002/fft2.70252
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Yuying Liu, Dat Q. Tran, J. Marc Rhoads. Probiotics in Disease Prevention and TreatmentThe Journal of Clinical Pharmacology 2018; 58(S10) doi: 10.1002/jcph.1121
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Yoshikuni Sugimura, Yichi Yang, Akira Kanda, Akihiro Mawatari, Yoshinori Tamada, Tatsuya Mikami, Shigeyuki Nakaji, Kazushige Ihara. Association between Gut Microbiota and Muscle Strength in Japanese General Population of the Iwaki Health Promotion ProjectMicroorganisms 2024; 12(3) doi: 10.3390/microorganisms12030622
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Yonglin Chen, Keer Yang, Mingxin Xu, Yishuo Zhang, Xiquan Weng, Jiaji Luo, Yanshuo Li, Yu-Heng Mao. Dietary Patterns, Gut Microbiota and Sports Performance in Athletes: A Narrative ReviewNutrients 2024; 16(11) doi: 10.3390/nu16111634
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Jin-Hui Rao, Wen-Da Zhang, Cheng-Peng Zha, Min-Yue Zhang, Yu-Jie Xing, Zai-Hui Wang, Jun-Xian Yu, Dong-Yan He, Chuan-Zheng Sun, Lei Li. Plasma proteins mediate the effects of the gut microbiota on the development of head and neck cancer: a two-sample and mediated Mendelian randomized studyDiscover Oncology 2025; 16(1) doi: 10.1007/s12672-025-01983-9
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Samantha N. Peltak, Tomoko Y. Steen. The Impact of Antibiotic Use on the Human Gut Microbiome: A ReviewGeorgetown Medical Review 2025;  doi: 10.52504/001c.143628
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Poria Kousik, Bhatta Shampa, Das Sanatan, Dey Madhumita, Halder Chandan, Datta Sankalita, Chakraborty Asit Kumar. Mechanism of multi-resistant bacterial pathogenesis: MDR genes are not so deadly unless plasmid-mediated toxin, virulence and regulatory genes are activatedOpen Journal of Bacteriology 2020; 4(1) doi: 10.17352/ojb.000013
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Martin Soldán, Ľubica Argalášová, Lucia Hadvinová, Bonzel Galileo, Jana Babjaková. The Effect of Dietary Types on Gut Microbiota Composition and Development of Non-Communicable Diseases: A Narrative ReviewNutrients 2024; 16(18) doi: 10.3390/nu16183134
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Eleonora Rubini, Nicole Schenkelaars, Melek Rousian, Kevin D. Sinclair, Lieske Wekema, Marijke M. Faas, Régine P.M. Steegers-Theunissen, Sam Schoenmakers. Maternal obesity during pregnancy leads to derangements in one-carbon metabolism and the gut microbiota: implications for fetal development and offspring wellbeingAmerican Journal of Obstetrics and Gynecology 2022; 227(3) doi: 10.1016/j.ajog.2022.04.013
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Ma. Concepción Peña-Juárez, Omar Rodrigo Guadarrama-Escobar, Pablo Serrano-Castañeda, Abraham Méndez-Albores, Alma Vázquez-Durán, Ricardo Vera-Graziano, Betsabé Rodríguez-Pérez, Mariana Salgado-Machuca, Ericka Anguiano-Almazán, Miriam Isabel Morales-Florido, Isabel Marlene Rodríguez-Cruz, José Juan Escobar-Chávez. Synergistic Effect of Retinoic Acid and Lactoferrin in the Maintenance of Gut HomeostasisBiomolecules 2024; 14(1) doi: 10.3390/biom14010078
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Kajari Das, M. Dhanalakshmi, Medha Pandya, D. Sruthi, Sushma Dave. Recent Frontiers of Phytochemicals2023;  doi: 10.1016/B978-0-443-19143-5.00006-2
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Hongyu Cheng, Xiong Guan, Dekun Chen, Wentao Ma. The Th17/Treg Cell Balance: A Gut Microbiota-Modulated StoryMicroorganisms 2019; 7(12) doi: 10.3390/microorganisms7120583
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Juan Carlos Ayala-García, Cinthya Estefhany Díaz-Benítez, Alfredo Lagunas-Martínez, Yaneth Citlalli Orbe-Orihuela, Ana Cristina Castañeda-Márquez, Eduardo Ortiz-Panozo, Víctor Hugo Bermúdez-Morales, Miguel Cruz, Ana Isabel Burguete-García. Mediation Analysis of Waist Circumference in the Association of Gut Microbiota with Insulin Resistance in ChildrenChildren 2023; 10(8) doi: 10.3390/children10081382
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Vikash Kumar, Basanta Kumar Das, Souvik Dhar, Kampan Bisai, Gde Sasmita Julyantoro Pande, Xiaoting Zheng, Satya Narayan Parida, Anupam Adhikari, Asim Kumar Jana. Ecytonucleospora hepatopenaei (EHP) disease prevalence and mortality in Litopenaeus vannamei: a comparative study from Eastern India shrimp farmsBMC Microbiology 2024; 24(1) doi: 10.1186/s12866-024-03681-y
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Bea R.H. Van den Bergh, Marion I. van den Heuvel, Marius Lahti, Marijke Braeken, Susanne R. de Rooij, Sonja Entringer, Dirk Hoyer, Tessa Roseboom, Katri Räikkönen, Suzanne King, Matthias Schwab. Prenatal developmental origins of behavior and mental health: The influence of maternal stress in pregnancyNeuroscience & Biobehavioral Reviews 2020; 117 doi: 10.1016/j.neubiorev.2017.07.003
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Konstantina Kontopoulou, Elias Iosifidis, Eleni Antoniadou, Polychronis Tasioudis, Efthymia Petinaki, Ergina Malli, Symeon Metallidis, Alkiviadis Vatopoulos, Nicolaos Malisiovas. The clinical significance of carbapenem-resistant Klebsiella pneumoniae rectal colonization in critically ill patients: from colonization to bloodstream infection Journal of Medical Microbiology 2019; 68(3) doi: 10.1099/jmm.0.000921
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Christian Höcht, Miguel A Allo, Ariel Héctor Polizio, Marcela A Morettón, Andrea Carranza, Diego A Chiappetta, Marcelo Roberto Choi. New and developing pharmacotherapies for hypertensionExpert Review of Cardiovascular Therapy 2022; 20(8) doi: 10.1080/14779072.2022.2105204
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Verena Schmitt, Rebecca Katharina Masanetz, Martin Weidenfeller, Lara Savannah Ebbinghaus, Patrick Süß, Stephan P. Rosshart, Stephan von Hörsten, Friederike Zunke, Jürgen Winkler, Wei Xiang. Gut-to-brain spreading of pathology in synucleinopathies: A focus on molecular signalling mediatorsBehavioural Brain Research 2023; 452 doi: 10.1016/j.bbr.2023.114574
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Emma Murray, Rupali Sharma, Kevin B. Smith, Kendall D. Mar, Rudra Barve, Matthew Lukasik, Atiqa F. Pirwani, Etienne Malette-Guyon, Sanjeevani Lamba, Bronwen J. Thomas, Homa Sadeghi-Emamchaie, Jacky Liang, Jean-François Mallet, Chantal Matar, Nafissa Ismail. Probiotic consumption during puberty mitigates LPS-induced immune responses and protects against stress-induced depression- and anxiety-like behaviors in adulthood in a sex-specific mannerBrain, Behavior, and Immunity 2019; 81 doi: 10.1016/j.bbi.2019.06.016
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Gloria Serena, Paolo D'Avino, Alessio Fasano. Celiac Disease and Non-celiac Wheat Sensitivity: State of Art of Non-dietary TherapiesFrontiers in Nutrition 2020; 7 doi: 10.3389/fnut.2020.00152
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Marina Fortea, Mercé Albert-Bayo, Mar Abril-Gil, John-Peter Ganda Mall, Xavier Serra-Ruiz, Alejandro Henao-Paez, Elba Expósito, Ana María González-Castro, Danila Guagnozzi, Beatriz Lobo, Carmen Alonso-Cotoner, Javier Santos. Present and Future Therapeutic Approaches to Barrier DysfunctionFrontiers in Nutrition 2021; 8 doi: 10.3389/fnut.2021.718093
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Elle C. Lindsay, Neil B. Metcalfe, Martin S. Llewellyn, Andy Fenton. The potential role of the gut microbiota in shaping host energetics and metabolic rateJournal of Animal Ecology 2020; 89(11) doi: 10.1111/1365-2656.13327
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Mohamed Sabri Bensaad, Dhiya Eddine Bensaad, Mohamed Amine Kahoul, Dania S. Waggas, Roua S. Baty, Rokayya Sami, Hamsa Jameel Banjer, Siraj B. Alharthi, Ruqaiah I. Bedaiwi, Zeyad M. Alharbi, Mohammad A. Alanazi, Nouf H. Alsubhi, Ashwaq M. Al-Nazawi, Nada Alqadri, Helal F. Al-Harthi. Integrated Computational Analysis of Physicochemical Features, Biological Properties, Kinase Target Prediction and Biotransformation Pathways in Drug DiscoveryInternational Journal of Pharmacology 2024; 20(5) doi: 10.3923/ijp.2024.748.767
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María Ruiz-Rico, Simone Renwick, Sarah J. Vancuren, Avery V. Robinson, Connor Gianetto-Hill, Emma Allen-Vercoe, José M. Barat. Impact of food preservatives based on immobilized phenolic compounds on an in vitro model of human gut microbiotaFood Chemistry 2023; 403 doi: 10.1016/j.foodchem.2022.134363
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El Bethel Lalthavel Hmar, Sujata Paul, Hemanta Kumar Sharma. The role of Shigella spp. in propagating bacillary dysentery in humans and the prominence of nanotechnology in disease preventionFuture Journal of Pharmaceutical Sciences 2024; 10(1) doi: 10.1186/s43094-024-00676-4
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Debarghya Kumar Chakraborty, Triparna Roy, Shyuan Thieu Ngo, Ammar Al-Chalabi, Ahmad Al Khleifat. Gut microbiota and ALS: cause, consequence or correlation? - a systematic reviewFrontiers in Neuroscience 2026; 20 doi: 10.3389/fnins.2026.1774417
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Etik Sulistyowati, Dian Handayani, Setyawati Soeharto, Xu F. Huang, Ahmad Rudijanto. Indonesian Brown rice improves obesity parameters and dysbiosis of gut microbiotaMediterranean Journal of Nutrition and Metabolism 2023; 16(2) doi: 10.3233/MNM-220108
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Youming He, Xiaobing Chen, Yongchun Li, Yunyi Liang, Ting Hong, Jie Yang, Zhuo Cao, Haiyan Mai, Jiale Yao, Tong Zhang, Kaize Wu, Jun Zou, Dan Feng. Curcumin supplementation alleviates hepatic fat content associated with modulation of gut microbiota-dependent bile acid metabolism in patients with nonalcoholic simple fatty liver disease: a randomized controlled trialThe American Journal of Clinical Nutrition 2024; 120(1) doi: 10.1016/j.ajcnut.2024.05.017
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Sandra Bermudez Sanchez, Rachel Pilla, Benjamin Sarawichitr, Alessandro Gramenzi, Fulvio Marsilio, Joerg M. Steiner, Jonathan A. Lidbury, Georgiana R. T. Woods, Jan S. Suchodolski, Alexander J. German. Untargeted fecal metabolome analysis in obese dogs after weight loss achieved by feeding a high-fiber-high-protein dietMetabolomics 2021; 17(7) doi: 10.1007/s11306-021-01815-1
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Yaman Sulaiman, Ingrida Marija Pacauskienė, Renata Šadzevičienė, Rugile Anuzyte. Oral and Gut Microbiota Dysbiosis Due to Periodontitis: Systemic Implications and Links to Gastrointestinal Cancer: A Narrative ReviewMedicina 2024; 60(9) doi: 10.3390/medicina60091416
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Kate Mills, Joelle Tan, Tahlia Guneratne, Lindsay Keir, Maya Goldstein, Cécile Ventola, Maureen Makama, Anne Ammerdorffer, A. Metin Gülmezoglu, Joshua P. Vogel, Annie R. A. McDougall, Zaky A. Zaky. Maternal gut microbiome interventions to improve maternal and perinatal health outcomes: Target product profile expert consensus and pipeline analysisPLOS One 2025; 20(7) doi: 10.1371/journal.pone.0321543
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Yang Wu, Yue Zhang, Wenwen Zhang, Yuanxi Huang, Xiangshi Lu, Lingmin Shang, Zhaoyue Zhou, Xiaolu Chen, Shuhui Li, Shaoqiang Cheng, Yanni Song. The tremendous clinical potential of the microbiota in the treatment of breast cancer: the next frontierJournal of Cancer Research and Clinical Oncology 2023; 149(13) doi: 10.1007/s00432-023-05014-4
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Jannike L. Krause, Beatrice Engelmann, David J. D. Lallinger, Ulrike Rolle-Kampczyk, Martin von Bergen, Hyun-Dong Chang. Multi-Omics Analysis Unravels the Impact of Stool Sample Logistics on Metabolites and Microbial CompositionMicroorganisms 2024; 12(10) doi: 10.3390/microorganisms12101998
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Claudia Manca, Besma Boubertakh, Nadine Leblanc, Thomas Deschênes, Sebastien Lacroix, Cyril Martin, Alain Houde, Alain Veilleux, Nicolas Flamand, Giulio G. Muccioli, Frédéric Raymond, Patrice D. Cani, Vincenzo Di Marzo, Cristoforo Silvestri. Germ-free mice exhibit profound gut microbiota-dependent alterations of intestinal endocannabinoidome signalingJournal of Lipid Research 2020; 61(1) doi: 10.1194/jlr.RA119000424
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Hao Dan, Wentong Wang, Xuhong Chen, Mariam N. Goda, Mohamed S. Kisha, Quanquan Cao. Fish cancer and its assistance to human cancer research: A fresh perspectiveComparative Biochemistry and Physiology Part C: Toxicology & Pharmacology 2026; 299 doi: 10.1016/j.cbpc.2025.110369
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Cailan Li, Gaoxiang Ai, Yongfu Wang, Qiang Lu, Chaodan Luo, Lihua Tan, Guosheng Lin, Yuhong Liu, Yucui Li, Huifang Zeng, Jiannan Chen, Zhixiu Lin, Yanfang Xian, Xiaoqi Huang, Jianhui Xie, Ziren Su. Oxyberberine, a novel gut microbiota-mediated metabolite of berberine, possesses superior anti-colitis effect: Impact on intestinal epithelial barrier, gut microbiota profile and TLR4-MyD88-NF-κB pathwayPharmacological Research 2020; 152 doi: 10.1016/j.phrs.2019.104603
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Narjess Bostanghadiri, Pardis Ziaeefar, Fatemeh Sameni, Mohammad Mahmoudi, Ali Hashemi, Davood Darban-Sarokhalil. The controversial association of gut and urinary microbiota with kidney stone formationMicrobial Pathogenesis 2021; 161 doi: 10.1016/j.micpath.2021.105257
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Masaki Maekawa, Kenji Yoshitani, Musashi Yahagi, Takashi Asahara, Yoshiyuki Shishido, Satsuki Fukushima, Naoki Tadokoro, Tomoyuki Fujita, Yoshihiko Ohnishi. Association between postoperative changes in the gut microbiota and pseudopsia after cardiac surgery: prospective observational studyBMC Surgery 2020; 20(1) doi: 10.1186/s12893-020-00907-4
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Łukasz Dobrek. POTENTIAL THERAPEUTIC OPTIONS TARGETING THE GUT DYSBIOSIS IN CHRONIC KIDNEY DISEASEWiadomości Lekarskie 2022; 75(7) doi: 10.36740/WLek202207127
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Paulina Żebrowska, Izabela Łaczmańska, Łukasz Łaczmański. Future Directions in Reducing Gastrointestinal Disorders in Children With ASD Using Fecal Microbiota TransplantationFrontiers in Cellular and Infection Microbiology 2021; 11 doi: 10.3389/fcimb.2021.630052
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Payal Kapoor, Apoorv Tiwari, Saloni Sharma, Vandita Tiwari, Bhawna Sheoran, Usman Ali, Monika Garg. Effect of anthocyanins on gut health markers, Firmicutes-Bacteroidetes ratio and short-chain fatty acids: a systematic review via meta-analysisScientific Reports 2023; 13(1) doi: 10.1038/s41598-023-28764-0
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Jiahua Zhang, Jiayao Feng, Yan Bai, Qishi Che, Hua Cao, Jiao Guo, Zhengquan Su. Ameliorating the effect and mechanism of chitosan oligosaccharide on nonalcoholic fatty liver disease in miceFood & Function 2023; 14(23) doi: 10.1039/D3FO03745B
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Wei-Ting Lee, Ya-Na Wu, Yi-Hsuan Chen, Shang-Rung Wu, Tsai-Miao Shih, Tsung-Ju Li, Li-Xing Yang, Chen-Sheng Yeh, Pei-Jane Tsai, Dar-Bin Shieh. Octahedron Iron Oxide Nanocrystals Prohibited Clostridium difficile Spore Germination and Attenuated Local and Systemic InflammationScientific Reports 2017; 7(1) doi: 10.1038/s41598-017-08387-y
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Wen-qiao He, Yi-quan Xiong, Jing Ge, Yan-xia Chen, Xue-jiao Chen, Xue-shan Zhong, Ze-jin Ou, Yu-han Gao, Ming-ji Cheng, Yun Mo, Yu-qi Wen, Min Qiu, Shu-ting Huo, Shao-wei Chen, Xue-yan Zheng, Huan He, Yong-zhi Li, Fang-fei You, Min-yi Zhang, Qing Chen. Composition of gut and oropharynx bacterial communities in Rattus norvegicus and Suncus murinus in ChinaBMC Veterinary Research 2020; 16(1) doi: 10.1186/s12917-020-02619-6
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Maria Lorella Giannì, Daniela Morniroli, Fabio Mosca, Maria Rescigno. Probiotics and Child Gastrointestinal HealthAdvances in Experimental Medicine and Biology 2024; 1449 doi: 10.1007/978-3-031-58572-2_3
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Julia Doroszkiewicz, Magdalena Groblewska, Barbara Mroczko. The Role of Gut Microbiota and Gut–Brain Interplay in Selected Diseases of the Central Nervous SystemInternational Journal of Molecular Sciences 2021; 22(18) doi: 10.3390/ijms221810028
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Wenxia Wang, Songlin Huang, Liangliang Yang, Guogang Zhang. Comparative Analysis of the Fecal Bacterial Microbiota of Wintering Whooper Swans (Cygnus Cygnus)Frontiers in Veterinary Science 2021; 8 doi: 10.3389/fvets.2021.670645
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Yetong Xu, Ludovic Lahaye, Zhengxiao He, Jinxiao Zhang, Chengbo Yang, Xiangshu Piao. Micro-encapsulated essential oils and organic acids combination improves intestinal barrier function, inflammatory responses and microbiota of weaned piglets challenged with enterotoxigenic Escherichia coli F4 (K88+)Animal Nutrition 2020; 6(3) doi: 10.1016/j.aninu.2020.04.004
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Jianghua Chen, Shilin Li, Jing Zhu, Wei Su, Congcong Jian, Jie Zhang, Jianhong Wu, Tingting Wang, Weihua Zhang, Fanwei Zeng, Shengjia Chang, Lihua Jia, Jiang Su, Yi Zhao, Jing Wang, Fanxin Zeng. Multi-omics profiling reveals potential alterations in rheumatoid arthritis with different disease activity levelsArthritis Research & Therapy 2023; 25(1) doi: 10.1186/s13075-023-03049-z
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Denise Chac, Chelsea N. Dunmire, Jasneet Singh, Ana A. Weil. Update on Environmental and Host Factors Impacting the Risk of Vibrio cholerae InfectionACS Infectious Diseases 2021; 7(5) doi: 10.1021/acsinfecdis.0c00914
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Shudan Liu, Ting Wang, Yuanyuan Liu, Yiwei Li, Junbai Ma, Qikuan Hu, Hao Wang, Xiaoxia Zhang, Jiajie She. Human placental mesenchymal stem cells ameliorates premature ovarian insufficiency via modulating gut microbiota and suppressing the inflammation in ratsPLOS ONE 2025; 20(3) doi: 10.1371/journal.pone.0313763
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Jinping Zhou, Rui Zhang, Pengpeng Guo, Peixia Li, Xixi Huang, Ye Wei, Chunxiao Yang, Jiali Zhou, Tingyu Yang, Yani Liu, Shaojun Shi. Effects of intestinal microbiota on pharmacokinetics of cyclosporine a in ratsFrontiers in Microbiology 2022; 13 doi: 10.3389/fmicb.2022.1032290
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Pan-Pan Jia, Muhammad Junaid, Ping-Ping Wen, Yi-Fan Yang, Wei-Guo Li, Xian-Guang Yang, De-Sheng Pei. Role of germ-free animal models in understanding interactions of gut microbiota to host and environmental health: A special reference to zebrafishEnvironmental Pollution 2021; 279 doi: 10.1016/j.envpol.2021.116925
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L. Twhigg, H.M. Ng, T. Glyn, C. Wall, R. Purcell. Fibre, microbes and radiotherapy: unravelling the gut’s impact on radiotherapy in cancerESMO Gastrointestinal Oncology 2025; 9 doi: 10.1016/j.esmogo.2025.100174
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Jintao Yuan, Shiqiong Sun, Essam H. Ibrahim, Muhammad Azhar Ud Din, Fei Mao, Suping Du. Gut microbiota and pattern recognition receptors in polycystic ovary syndromeJournal of Reproductive Immunology 2026; 175 doi: 10.1016/j.jri.2026.104882
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Efthalia Moustakli, Themos Grigoriadis, Anastasios Potiris, Eirini Drakaki, Athanasios Zikopoulos, Ismini Anagnostaki, Athanasios Zachariou, Ekaterini Domali, Peter Drakakis, Sofoklis Stavros. The Impact of Endocrine Disruptors on the Female Genital Tract Microbiome: A Narrative ReviewLife 2025; 15(8) doi: 10.3390/life15081177
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Karolina Skonieczna-Żydecka, Ewa Stachowska, Dominika Maciejewska, Karina Ryterska, Joanna Palma, Maja Czerwińska-Rogowska, Mariusz Kaczmarczyk, Anna Gudan, Honorata Mruk, Barbara Świniarska, Justyna Kałduńska, Zofia Stachowska, Przemysław Mijal, Tomasz Mazur, Maciej Kupczyński, Wojciech Marlicz. The Digestive Health among Participants of the Woodstock Rock Festival in Poland—A Cross-Sectional SurveyInternational Journal of Environmental Research and Public Health 2018; 15(10) doi: 10.3390/ijerph15102256
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Xinpei Li, Shijie Shang, Meng Wu, Qian Song, Dawei Chen. Gut microbial metabolites in lung cancer development and immunotherapy: Novel insights into gut-lung axisCancer Letters 2024; 598 doi: 10.1016/j.canlet.2024.217096
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Jenni Firrman, Stef Deyaert, Karley K. Mahalak, LinShu Liu, Aurélien Baudot, Marie Joossens, Jonas Poppe, Simon J. S. Cameron, Pieter Van den Abbeele. The Bifidogenic Effect of 2’Fucosyllactose Is Driven by Age-Specific Bifidobacterium Species, Demonstrating Age as an Important Factor for Gut Microbiome Targeted Precision MedicineNutrients 2024; 17(1) doi: 10.3390/nu17010151
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Gabriela Pustiglione Marinsek, Marcos Antônio de Oliveira, Isabelly Cristina Correia dos Santos de Oliveira, Anella Saggese, Anna Capaldo, Renata de Britto Mari. Intestinal microbiota and enteric alterations in Poecilia reticulata exposed to environmentally relevant azithromycin concentrationsAquatic Toxicology 2026; 298 doi: 10.1016/j.aquatox.2026.107913
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Stefania Vaga, Sunjae Lee, Boyang Ji, Anna Andreasson, Nicholas J. Talley, Lars Agréus, Gholamreza Bidkhori, Petia Kovatcheva-Datchary, Junseok Park, Doheon Lee, Gordon Proctor, Stanislav Dusko Ehrlich, Jens Nielsen, Lars Engstrand, Saeed Shoaie. Compositional and functional differences of the mucosal microbiota along the intestine of healthy individualsScientific Reports 2020; 10(1) doi: 10.1038/s41598-020-71939-2
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Hanwen Li, Changwei Zhao, Yang Yang, Zhixiong Zhou, Jingwei Qi, Chuanren Li, Julie Urban. The Influence of Gut Microbiota on the Fecundity of Henosepilachna vigintioctopunctata (Coleoptera: Coccinellidae)Journal of Insect Science 2021; 21(4) doi: 10.1093/jisesa/ieab061
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Magdy El‐Salhy, Tarek Mazzawi, Trygve Hausken, Jan Gunnar Hatlebakk. Irritable bowel syndrome patients who are not likely to respond to fecal microbiota transplantationNeurogastroenterology & Motility 2022; 34(9) doi: 10.1111/nmo.14353
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Ellie Chen, Nadim J. Ajami, Donna L. White, Yanhong Liu, Shawn Gurwara, Kristi Hoffman, David Y. Graham, Hashem B. El-Serag, Joseph F. Petrosino, Li Jiao. Dairy Consumption and the Colonic Mucosa-Associated Gut Microbiota in Humans—A Preliminary InvestigationNutrients 2025; 17(3) doi: 10.3390/nu17030567
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Arox W. Kamng’ona, Rebecca Young, Charles D. Arnold, Emma Kortekangas, Noel Patson, Josh M. Jorgensen, Elizabeth L. Prado, David Chaima, Chikondi Malamba, Ulla Ashorn, Yue-Mei Fan, Yin B. Cheung, Per Ashorn, Kenneth Maleta, Kathryn G. Dewey. The association of gut microbiota characteristics in Malawian infants with growth and inflammationScientific Reports 2019; 9(1) doi: 10.1038/s41598-019-49274-y
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Serena Boscaini, Peter Skuse, Kanishka N. Nilaweera, John F. Cryan, Paul D. Cotter. The ‘Whey’ to good health: Whey protein and its beneficial effect on metabolism, gut microbiota and mental healthTrends in Food Science & Technology 2023; 133 doi: 10.1016/j.tifs.2022.12.009
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Witold Czarnik, Piotr Fularski, Agata Gajewska, Paulina Jakubowska, Zofia Uszok, Ewelina Młynarska, Jacek Rysz, Beata Franczyk. The Role of Intestinal Microbiota and Diet as Modulating Factors in the Course of Alzheimer’s and Parkinson’s DiseasesNutrients 2024; 16(2) doi: 10.3390/nu16020308
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Tushar Mishra, Vikrant Rahi, Ashwini Kamble, Ravinder K. Kaundal. Microbiota-Gut-Brain Axis and CNS Disorders2025;  doi: 10.1016/B978-0-443-21680-0.00014-6
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Gianluca Morroni, Andrea Brenciani, Alice Litta-Mulondo, Carla Vignaroli, Gianmarco Mangiaterra, Simona Fioriti, Barbara Citterio, Oscar Cirioni, Eleonora Giovanetti, Francesca Biavasco. Characterization of a new transferable MDR plasmid carrying thepbp5gene from a clade B commensalEnterococcus faeciumJournal of Antimicrobial Chemotherapy 2019; 74(4) doi: 10.1093/jac/dky549
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Stephen Obol Opiyo, Peace Proscovia Aber. Integrating GIS and Genomics for AMR One Health Drug Target Discovery in Imipenem-Resistant Escherichia coliWellcome Open Research 2026; 10 doi: 10.12688/wellcomeopenres.23819.2
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Patric U. B. Vogel, Günter A. Schaub. Interaction of Bacteria and Fleas, Focusing on the Plague Bacterium—A ReviewMicroorganisms 2025; 13(11) doi: 10.3390/microorganisms13112619
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Shiyu Niu, Lihong Ren. Treatment of obesity by acupuncture combined with medicine based on pathophysiological mechanism: A reviewMedicine 2023; 102(48) doi: 10.1097/MD.0000000000036071
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Oliwia Zakerska-Banaszak, Joanna Zuraszek-Szymanska, Piotr Eder, Karolina Ladziak, Ryszard Slomski, Marzena Skrzypczak-Zielinska. The Role of Host Genetics and Intestinal Microbiota and Metabolome as a New Insight into IBD PathogenesisInternational Journal of Molecular Sciences 2024; 25(17) doi: 10.3390/ijms25179589
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Oumaima Zidi, Nessrine Souai, Henda Raies, Farhat Ben Ayed, Amel Mezlini, Sonia Mezrioui, Fabrice Tranchida, Jean-Marc Sabatier, Amor Mosbah, Ameur Cherif, Laetitia Shintu, Soumaya Kouidhi. Fecal Metabolic Profiling of Breast Cancer Patients during Neoadjuvant Chemotherapy Reveals Potential BiomarkersMolecules 2021; 26(8) doi: 10.3390/molecules26082266
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Apurva Kakade, Monika Sharma, El-Sayed Salama, Peng Zhang, Lihong Zhang, Xiaohong Xing, Jianwei Yue, Zhongzhong Song, Lan Nan, Su Yujun, Xiangkai Li. Heavy metals (HMs) pollution in the aquatic environment: Role of probiotics and gut microbiota in HMs remediationEnvironmental Research 2023; 223 doi: 10.1016/j.envres.2022.115186
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Debora Compare, Costantino Sgamato, Alba Rocco, Pietro Coccoli, Carmen Ambrosio, Gerardo Nardone. The Leaky Gut and Human Diseases: “Can’t Fill the Cup if You Don’t Plug the Holes First”Digestive Diseases 2024; 42(6) doi: 10.1159/000540379
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Yanbin Zhu, Guangming Sun, Yangji Cidan, Bin Shi, Zhankun Tan, Jian Zhang, Wangdui Basang. Comprehensive Multi-Omic Evaluation of the Microbiota and Metabolites in the Colons of Diverse Swine BreedsAnimals 2024; 14(8) doi: 10.3390/ani14081221
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Pei-Wen Wang, Wei-Ting Lee, Ya-Na Wu, Dar-Bin Shieh. Opportunities for Nanomedicine in Clostridioides difficile InfectionAntibiotics 2021; 10(8) doi: 10.3390/antibiotics10080948
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María Velasco-Galilea, Miriam Piles, Marc Viñas, Oriol Rafel, Olga González-Rodríguez, Miriam Guivernau, Juan P. Sánchez. Rabbit Microbiota Changes Throughout the Intestinal TractFrontiers in Microbiology 2018; 9 doi: 10.3389/fmicb.2018.02144
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Mackenzie R. Bowden, Cresten B. Mansfeldt. Chemical Mixture Toxicity and Metagenomic Profiles Temporally Covary in Wastewater from a Municipal SewerACS ES&T Water 2026; 6(7) doi: 10.1021/acsestwater.6c00095
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Sajid Ali, Muhammad Hamayun, Muhammad Siraj, Sumera Afzal Khan, Ho-Youn Kim, Bokyung Lee. Recent advances in prebiotics: Classification, mechanisms, and health applicationsFuture Foods 2025; 12 doi: 10.1016/j.fufo.2025.100680
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Shvetank Bhatt, Rohini Pujari, Yuvraj Patil, Satish Shilpi, K. Anitha. Synbiotics in Human Health: Biology to Drug Delivery2024;  doi: 10.1007/978-981-99-5575-6_4
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Dongdong Duan, Mingyu Wang, Jinyi Han, Mengyu Li, Zhenyu Wang, Shenping Zhou, Wenshui Xin, Xinjian Li. Advances in multi-omics integrated analysis methods based on the gut microbiome and their applicationsFrontiers in Microbiology 2025; 15 doi: 10.3389/fmicb.2024.1509117
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Hannah S. Rackers, Stephanie Thomas, Kelsey Williamson, Rachael Posey, Mary C. Kimmel. Emerging literature in the Microbiota-Brain Axis and Perinatal Mood and Anxiety DisordersPsychoneuroendocrinology 2018; 95 doi: 10.1016/j.psyneuen.2018.05.020
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Martina Ferrillo, Amerigo Giudice, Mario Migliario, Filippo Renó, Lorenzo Lippi, Dario Calafiore, Nicola Marotta, Roberto de Sire, Leonzio Fortunato, Antonio Ammendolia, Marco Invernizzi, Alessandro de Sire. Oral–Gut Microbiota, Periodontal Diseases, and Arthritis: Literature Overview on the Role of ProbioticsInternational Journal of Molecular Sciences 2023; 24(5) doi: 10.3390/ijms24054626
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Qi Huang, Fei You, Fengxia Liang, Chaoyang Ma. Dietary microbes and functional dyspepsia: modulating the gut microecology for therapeutic benefitFrontiers in Nutrition 2025; 12 doi: 10.3389/fnut.2025.1625987
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Hadi Mansour, Hasan Slika, Suzanne A. Nasser, Gianfranco Pintus, Maha Khachab, Amirhossein Sahebkar, Ali H. Eid. Flavonoids, gut microbiota and cardiovascular disease: Dynamics and interplayPharmacological Research 2024; 209 doi: 10.1016/j.phrs.2024.107452
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Lee Wanyi, Goro HANYA. Ecological and Social Factors Shaping Primate Gut MicrobiomePrimate Research 2025; 41(1) doi: 10.2354/psj.41.005
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Fabine Correia Passos, Lucas Matheus Gonçalves de Oliveira, Fabíola Ramos Jesus, Dalila Lucíola Zanette, Odilon Lobão Leal Neto, Margarida Célia Lima Costa Neves, Antônio Carlos Moreira Lemos, Gyselle Chrystina Baccan. Beneficial Bacteria in the Gut Microbiota May Lead to Improved Metabolic and Immunological Status in Chronic Obstructive Pulmonary DiseaseMedical Sciences 2024; 12(3) doi: 10.3390/medsci12030041
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Angeliki Katsarou, Ioannis I Moustakas, Iryna Pyrina, Panagiotis Lembessis, Michael Koutsilieris, Antonios Chatzigeorgiou. Metabolic inflammation as an instigator of fibrosis during non-alcoholic fatty liver diseaseWorld Journal of Gastroenterology 2020; 26(17): 1993-2011 doi: 10.3748/wjg.v26.i17.1993
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Shuna Hou, Jiachen Yu, Yongshuang Li, Duoyi Zhao, Zhiyu Zhang. Advances in Fecal Microbiota Transplantation for Gut Dysbiosis‐Related DiseasesAdvanced Science 2025; 12(13) doi: 10.1002/advs.202413197
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Dilyara Khusnutdinova, Tatiana Grigoryeva, Sayar Abdulkhakov, Dilyara Safina, Maria Siniagina, Maria Markelova, Eugenia Boulygina, Sergey Malanin, Alexander Tyakht, Boris Kovarsky, Ruzilya Ismagilova, Rustam Abdulkhakov, Vladislav Chernov. Gut Microbiome Shotgun Sequencing in Assessment of Microbial Community Changes Associated with H. pylori Eradication TherapyBioNanoScience 2016; 6(4) doi: 10.1007/s12668-016-0285-y
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Joshua R. Barton, Annie K. Londregan, Tyler D. Alexander, Ariana A. Entezari, Manuel Covarrubias, Scott A. Waldman. Enteroendocrine cell regulation of the gut-brain axisFrontiers in Neuroscience 2023; 17 doi: 10.3389/fnins.2023.1272955
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Yuan Xia, Chang Liang, Hesheng Luo, Yan Zhang. Therapeutic Potential of Flavonoids and Flavonoid-Rich Compounds in Irritable Bowel SyndromeDrug Design, Development and Therapy 2025;  doi: 10.2147/DDDT.S515004
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Nazi ZINATIZADEH, Farzad KHALILI, Parviz FALLAH, Malihe FARID, Maryam GERAVAND, Somayeh YASLIANIFARD. POTENTIAL PREVENTIVE EFFECT OF LACTOBACILLUS ACIDOPHILUS AND LACTOBACILLUS PLANTARUM IN PATIENTS WITH POLYPS OR COLORECTAL CÂNCERArquivos de Gastroenterologia 2018; 55(4) doi: 10.1590/s0004-2803.201800000-87
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Gerardo N. Guerrero-Flores, Belén Carlino, Rocío V. Gili, Sara Leeson, Martin L. Mayta. Medicinal Applications of Phytopharmaceuticals2024;  doi: 10.1007/978-3-031-63677-6_4
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E. Angela Murphy, Kandy T. Velázquez. Diet, Inflammation, and Health2022;  doi: 10.1016/B978-0-12-822130-3.00017-X
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Haiyan Chen, Jiamin Cao, Feng Zhang, Wei Xiong. Significance of Gut Microbiota on Graves’ DiseaseInternational Journal of General Medicine 2024;  doi: 10.2147/IJGM.S467888
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Cheng Zhang, Fengwei Chen, Yane Shen, Yuqing Chen, Jing Ma. Sleep apnea is associated with the increase of certain genera of Ruminococcaceae and Lachnospiraceae in the gut microbiome of hypertensive patientsExpert Review of Respiratory Medicine 2022; 16(11-12) doi: 10.1080/17476348.2022.2147509
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Man Zhao, Shuo Li, Fengyang Wu, Zhaohong Tang, Lijun Hou, Junai Guo, Yuchun Xin, Xiang Chen, Baojiang Chen. Effects of curcumin on antioxidant-related genes and caecal flora in rabbitsItalian Journal of Animal Science 2024; 23(1) doi: 10.1080/1828051X.2023.2297557
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Ying Zhou, Mei Yang, Xiangji Yan, Lingmin Zhang, Ning Lu, Yana Ma, Yuanyuan Zhang, Manli Cui, Mingzhen Zhang, Mingxin Zhang. Oral Nanotherapeutics of Andrographolide/Carbon Monoxide Donor for Synergistically Anti-inflammatory and Pro-resolving Treatment of Ulcerative ColitisACS Applied Materials & Interfaces 2023; 15(30) doi: 10.1021/acsami.3c09342
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Caroline Jensen, Marie Fagervik Antonsen, Gülen Arslan Lied. Gut Microbiota and Fecal Microbiota Transplantation in Patients with Food Allergies: A Systematic ReviewMicroorganisms 2022; 10(10) doi: 10.3390/microorganisms10101904
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Panagiota Kakni, Barry Jutten, Daniel Teixeira Oliveira Carvalho, John Penders, Roman Truckenmüller, Pamela Habibovic, Stefan Giselbrecht. Hypoxia-tolerant apical-out intestinal organoids to model host-microbiome interactionsJournal of Tissue Engineering 2023; 14 doi: 10.1177/20417314221149208
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Daniela Ratto, Elisa Roda, Marcello Romeo, Maria Teresa Venuti, Anthea Desiderio, Giuseppe Lupo, Enrica Capelli, Anna Sandionigi, Paola Rossi. The Many Ages of Microbiome–Gut–Brain AxisNutrients 2022; 14(14) doi: 10.3390/nu14142937
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Vanessa Nadia Dargenio, Costantino Dargenio, Stefania Castellaneta, Andrea De Giacomo, Marianna Laguardia, Federico Schettini, Ruggiero Francavilla, Fernanda Cristofori. Intestinal Barrier Dysfunction and Microbiota–Gut–Brain Axis: Possible Implications in the Pathogenesis and Treatment of Autism Spectrum DisorderNutrients 2023; 15(7) doi: 10.3390/nu15071620
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Jie Zhou, Xiao Yun, Jiting Wang, Qi Li, Yanli Wang, Wenjing Zhang, Zhicheng Fan. Biological toxicity of sulfamethoxazole in aquatic ecosystem on adult zebrafish (Danio rerio)Scientific Reports 2024; 14(1) doi: 10.1038/s41598-024-59971-y
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Ishwarpreet Kaur, Vanita Suri, Naresh Sachdeva, Satya Vati Rana, Bikas Medhi, Nancy Sahni, Jayesh Ahire, Amarjeet Singh. Efficacy of multi-strain probiotic along with dietary and lifestyle modifications on polycystic ovary syndrome: a randomised, double-blind placebo-controlled studyEuropean Journal of Nutrition 2022; 61(8) doi: 10.1007/s00394-022-02959-z
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Carmela Colica, Immacolata Vecchio. Gut microbiota: origin or panacea for all ills? Immune and metabolic diseases, nutrition, and microbiota-based interventionsMicrobial Pathogenesis 2026; 212 doi: 10.1016/j.micpath.2025.108213
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Claudia Muñoz Yañez, Alejandra Méndez Hernández, Alondra Martínez Sandoval, María Aurora Maravilla Domínguez, Soraya Amalí Zavaleta Muñiz, Janeth Oliva Guangorena Gómez. Prevalence of Blastocystis and its association with Firmicutes/Bacteroidetes ratio in clinically healthy and metabolically ill subjectsBMC Microbiology 2021; 21(1) doi: 10.1186/s12866-021-02402-z
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Angelika Krumina, Marina Bogdanova, Sandra Gintere, Ludmila Viksna. Gut–Lung Microbiota Interaction in COPD Patients: A Literature ReviewMedicina 2022; 58(12) doi: 10.3390/medicina58121760
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Maximilian Budin, Nemandra A. Sandiford, Thorsten Gehrke, Mustafa Citak. Body mass index matters: morbid obese patients have different microorganism profiles in the setting of periprosthetic hip joint infectionsInternational Orthopaedics 2025; 49(6) doi: 10.1007/s00264-025-06513-4
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Wanzi Yao, Qiuhong Kong, Lijun You, Saiyi Zhong, Kseniya Hileuskaya. Polysaccharides from brown seaweed: Physicochemical properties, absorption in the intestine, and beneficial effects on intestinal barrierFood Frontiers 2023; 4(4) doi: 10.1002/fft2.288
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Marta Molska, Kinga Mruczyk, Angelika Cisek-Woźniak, Wojciech Prokopowicz, Patrycja Szydełko, Zuzanna Jakuszewska, Karolina Marzec, Martyna Trocholepsza. The Influence of Intestinal Microbiota on BDNF LevelsNutrients 2024; 16(17) doi: 10.3390/nu16172891
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Zhenming Hao, Yongqiang Xie, Ru Zhang, Hui Sang, Luxi Li, Yulin Liu, Jinbo Hu, Jijun Wang, Keqiang Chai, Qiang Zhao. Gut microbiota as a multifaceted modulator of prostate cancer: Mechanistic insights, therapeutic opportunities and clinical challenges (Review)Molecular Medicine Reports 2025; 33(2) doi: 10.3892/mmr.2025.13775
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Anas Ahmad Khan, Tanveer Ahmad, Nasir Mukhtar. Optimizing gut health in the era of antimicrobial stewardshipWorld's Poultry Science Journal 2024; 80(2) doi: 10.1080/00439339.2024.2308232
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Dikonketso Shirley‐may Matjuda, Olayinka Ayobami Aiyegoro. Analysis of bacteriological pollution and the detection of antibiotic resistance genes of prevailing bacteria emanating from pig farm seepageMicrobiologyOpen 2019; 8(5) doi: 10.1002/mbo3.737
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Ishwari Gyawali, Guilian Zhou, Guli Xu, Genghui Li, Yujun Wang, Yuxian Zeng, Jincheng Li, Jingjing Zhou, Canjun Zhu, Gang Shu, Qingyan Jiang. Supplementation of microencapsulated probiotics modulates gut health and intestinal microbiotaFood Science & Nutrition 2023; 11(8) doi: 10.1002/fsn3.3414
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Kaifeng Meng, Xing Lin, Yuanyuan Chen, Meidi Hu, Wei Hu, Daji Luo. Integrated analysis of the digestive tract bacterial community on individual growth in sibling generation of Swamp Eels (Monopterus albus)Aquaculture 2023; 566 doi: 10.1016/j.aquaculture.2023.739228
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Praveen Kumar, Viswanath Bandi. The Sleep–Gut–Brain Axis and Its Role in Early Childhood Development: A Standard Narrative ReviewJournal of Pediatric Neurosciences 2026; 21(1) doi: 10.4103/jpn.jpn_67_25
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Richard LJ Day, Ashton J Harper, Rachel M Woods, Owen G Davies, Liam M Heaney. Probiotics: Current Landscape and Future HorizonsFuture Science OA 2019; 5(4) doi: 10.4155/fsoa-2019-0004
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Denease Francis, Anupama Chawla, Joseph F. LaComb, Katherine Markarian, Charles E. Robertson, Daniel N. Frank, Grace N. Gathungu. Gastroesophageal reflux and PPI exposure alter gut microbiota in very young infantsFrontiers in Pediatrics 2023; 11 doi: 10.3389/fped.2023.1254329
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Lei Li, Shan Jing, Yun Tang, Dayong Li, Mingsen Qin. The effects of food provisioning on the gut microbiota community and antibiotic resistance genes of Yunnan snub-nosed monkeyFrontiers in Microbiology 2024; 15 doi: 10.3389/fmicb.2024.1361218
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Guangpei Xu, Chuanbo Sun, Ping Jing, Yanfei He, Lei Yang, Xinghua Zhao. The effect of plant crude extract on fecal microbiota in dogs with diarrhea induced by senna leavesArquivo Brasileiro de Medicina Veterinária e Zootecnia 2025; 77(5) doi: 10.1590/1678-4162-13425
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Betul Koc, Nazli Tunca Sanlier, Nevin Sanlier. Relationship with food allergies and birth mode and microbiotaEgyptian Pediatric Association Gazette 2025; 73(1) doi: 10.1186/s43054-025-00363-w
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Maurizio Mennini, Renato Tambucci, Carla Riccardi, Francesca Rea, Paola De Angelis, Alessandro Fiocchi, Amal Assa’ad. Eosinophilic Esophagitis and Microbiota: State of the ArtFrontiers in Immunology 2021; 12 doi: 10.3389/fimmu.2021.595762
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Hong-Yu Cheng, Meng-Xia Ning, De-Kun Chen, Wen-Tao Ma. Interactions Between the Gut Microbiota and the Host Innate Immune Response Against PathogensFrontiers in Immunology 2019; 10 doi: 10.3389/fimmu.2019.00607
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Marie Beitelshees, Andrew Hill, Charles H. Jones, Blaine A. Pfeifer. Phenotypic Variation during Biofilm Formation: Implications for Anti-Biofilm Therapeutic DesignMaterials 2018; 11(7) doi: 10.3390/ma11071086
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Yiqing Zheng, Shasha Xiang, Hongxing Zhang, Kun Ye, Yalin Zhang, Yin Ge, Xiao Feng, Xuan Bao, Jie Chen, Xuan Zhu. Vitamin B12 Enriched in Spinach and its Effects on Gut MicrobiotaJournal of Agricultural and Food Chemistry 2021; 69(7) doi: 10.1021/acs.jafc.0c07597
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Xuan Zhou, Jian Zhou, Qingfeng Ban, Mei Zhang, Bo Ban. Effects of metformin on the glucose regulation, lipid levels and gut microbiota in high-fat diet with streptozotocin induced type 2 diabetes mellitus ratsEndocrine 2024; 86(1) doi: 10.1007/s12020-024-03843-y
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Helen T. Groves, Leah Cuthbertson, Phillip James, Miriam F. Moffatt, Michael J. Cox, John S. Tregoning. Respiratory Disease following Viral Lung Infection Alters the Murine Gut MicrobiotaFrontiers in Immunology 2018; 9 doi: 10.3389/fimmu.2018.00182
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Zhenghao Li, Zhengwei Luo, Defu Hu. Assessing Fecal Microbial Diversity and Hormone Levels as Indicators of Gastrointestinal Health in Reintroduced Przewalski’s Horses (Equus ferus przewalskii)Animals 2024; 14(17) doi: 10.3390/ani14172616
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Karen P. Gomez, Emma Clay-Barbour, Giselle Z. Schiet, Samantha Stubbs, Mohammed AbuBakar, Rhyan B. Shanker, Erica E. Schultz. Hydrodechlorination of Aryl Chlorides Under Biocompatible ConditionsACS Omega 2022; 7(18) doi: 10.1021/acsomega.2c01204
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Kaija Harlow, Elizabeth K. Service, Jace E. Geiger, Bradley E. Carlson, Steven J.A. Kimble, Bernd Schierwater. The relationships between box turtle gut microbiomes and personalityPLOS One 2025; 20(12) doi: 10.1371/journal.pone.0339132
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Diego Sandoval-Vargas, Nataly D. Concha-Rubio, Paola Navarrete, Matías Castro, Daniel A. Medina. Short Communication: Obesity Intervention Resulting in Significant Changes in the Human Gut Viral CompositionApplied Sciences 2021; 11(21) doi: 10.3390/app112110039
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Deok-Seo Yoon, Jin-Hyoung Kim, Il-Chan Kim, Youji Wang, Zhou Yang, Min-Chul Lee, Jae-Seong Lee. Effects of environmental factors on host-microbiota interactions in the guts of aquatic organisms: A reviewComparative Biochemistry and Physiology Part C: Toxicology & Pharmacology 2026; 300 doi: 10.1016/j.cbpc.2025.110381
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Yu Wang, Min Zhao, Chunzhi Xie, Lilang Li, Ling Lin, Qiji Li, Liangqun Li, Faju Chen, Xiaosheng Yang, Juan Yang, Ming Gao. Fermented Gastrodia elata Bl. Alleviates Cognitive Deficits by Regulating Neurotransmitters and Gut Microbiota in D-Gal/AlCl3-Induced Alzheimer’s Disease-like MiceFoods 2024; 13(13) doi: 10.3390/foods13132154
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Aline C. Fenneman, Elena Rampanelli, Yue S. Yin, Jesse Ames, Martin J. Blaser, Eric Fliers, Max Nieuwdorp. Gut microbiota and metabolites in the pathogenesis of endocrine diseaseBiochemical Society Transactions 2020; 48(3) doi: 10.1042/BST20190686
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Suleiman Ibrahim Mohammad, Yasir Mohammed Hammood, Asokan Vasudevan, Subasini Uthirapathy, Suhas Ballal, A. Sabarivani, Swati Mishra, Deepak Nathiya, Zahraa Haleem Al-qaim, Abed J. Kadhim. Mechanistic Interplay of Gut Microbiota and Blood–Brain Barrier Integrity in Neurodegenerative DiseasesMolecular Neurobiology 2026; 63(1) doi: 10.1007/s12035-025-05447-7
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Ece Tüsüz Önata, Öner Özdemir. Fecal microbiota transplantation in allergic diseasesWorld Journal of Methodology 2025; 15(2): 101430 doi: 10.5662/wjm.v15.i2.101430
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Liyuan Zhou, Xinhua Xiao, Qian Zhang, Jia Zheng, Mingqun Deng. Deciphering the Anti-obesity Benefits of Resveratrol: The “Gut Microbiota-Adipose Tissue” AxisFrontiers in Endocrinology 2019; 10 doi: 10.3389/fendo.2019.00413
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Tong Wang, Hong-Xia Wu, Wei-jie Li, Rong Xu, Fang Qiao, Zhen-Yu Du, Mei-Ling Zhang. Effects of dietary mannan oligosaccharides (MOS) supplementation on metabolism, inflammatory response and gut microbiota of juvenile Nile tilapia (Oreochromis niloticus) fed with high carbohydrate dietFish & Shellfish Immunology 2022; 130 doi: 10.1016/j.fsi.2022.09.052
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Tony D. Jung, Paul S. Jung, Lucshman Raveendran, Yasamin Farbod, Anna Dvorkin-Gheva, Boris Sakic, Michael G. Surette, Henry Szechtman. Changes in gut microbiota during development of compulsive checking and locomotor sensitization induced by chronic treatment with the dopamine agonist quinpiroleBehavioural Pharmacology 2018; 29(2 and 3) doi: 10.1097/FBP.0000000000000363
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Yue Yin, Weibo Feng, Xilang Chen, Jie Chen, Guodong Wang, Limin Xia, Kaichun Wu. Intestinal microecology dysbiosis in inflammatory bowel disease: Pathogenesis and therapeutic strategiesThe Innovation Medicine 2024; 2(4) doi: 10.59717/j.xinn-med.2024.100092
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Thomas Golda, Claudio Lazzara, Carla Zerpa, Lucia Sobrino, Valeria Fico, Esther Kreisler, Sebastiano Biondo. Risk factors for ileocolic anastomosis dehiscence; a cohort studyThe American Journal of Surgery 2020; 220(1) doi: 10.1016/j.amjsurg.2019.11.020
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Se-Ran Jun, Amrita Cheema, Chhanda Bose, Marjan Boerma, Philip T. Palade, Eugenia Carvalho, Sanjay Awasthi, Sharda P. Singh. Multi-Omic Analysis Reveals Different Effects of Sulforaphane on the Microbiome and Metabolome in Old Compared to Young MiceMicroorganisms 2020; 8(10) doi: 10.3390/microorganisms8101500
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Xin Wang, Haoyu Gao, Yiyao Zeng, Jie Chen. Exploring the relationship between gut microbiota and breast diseases using Mendelian randomization analysisFrontiers in Medicine 2024; 11 doi: 10.3389/fmed.2024.1450298
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Margaret M. Smith, James Melrose. Xylan Prebiotics and the Gut Microbiome Promote Health and Wellbeing: Potential Novel Roles for Pentosan PolysulfatePharmaceuticals 2022; 15(9) doi: 10.3390/ph15091151
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Silvia Vivarelli, Chiara Costa, Michele Teodoro, Federica Giambò, Aristidis Michael Tsatsakis, Concettina Fenga. Polyphenols: a route from bioavailability to bioactivity addressing potential health benefits to tackle human chronic diseasesArchives of Toxicology 2023; 97(1) doi: 10.1007/s00204-022-03391-2
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Aneela Gulnaz, Jawad Nadeem, Jong-Hun Han, Lee-Ching Lew, Jae-Dong Son, Yong-Ha Park, Irfan A. Rather, Yan-Yan Hor. Lactobacillus Sps in Reducing the Risk of Diabetes in High-Fat Diet-Induced Diabetic Mice by Modulating the Gut Microbiome and Inhibiting Key Digestive Enzymes Associated with DiabetesBiology 2021; 10(4) doi: 10.3390/biology10040348
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Elise Slevin, Sachiko Koyama, Kelly Harrison, Ying Wan, James E. Klaunig, Chaodong Wu, Ashok K. Shetty, Fanyin Meng. Dysbiosis in gastrointestinal pathophysiology: Role of the gut microbiome in Gulf War IllnessJournal of Cellular and Molecular Medicine 2023; 27(7) doi: 10.1111/jcmm.17631
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Soraya Mousavi, Stefan Bereswill, Markus M. Heimesaat. Fighting Campylobacter InfectionsCurrent Topics in Microbiology and Immunology 2021; 431 doi: 10.1007/978-3-030-65481-8_9
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Miloš Mitić, Tamara Lazarević-Pašti. Does the application of acetylcholinesterase inhibitors in the treatment of Alzheimer’s disease lead to depression?Expert Opinion on Drug Metabolism & Toxicology 2021; 17(7) doi: 10.1080/17425255.2021.1931681
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Ruixue Zhong, Ling Shen, Yilin Fan, Qiaomei Luo, Ran Hong, Xiaoli Sun, Xia Zhou, Jun Wan. Anti-aging mechanism and effect of treatment with raw and wine-steamed Polygonatum sibiricum on D-galactose-induced aging in mice by inhibiting oxidative stress and modulating gut microbiotaFrontiers in Pharmacology 2024; 15 doi: 10.3389/fphar.2024.1335786
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Wen Yao Mak, Qingfeng He, Wenyu Yang, Nuo Xu, Aole Zheng, Min Chen, Jiaying Lin, Yufei Shi, Xiaoqiang Xiang, Xiao Zhu. Application of MIDD to accelerate the development of anti-infectives: Current status and future perspectivesAdvanced Drug Delivery Reviews 2024; 214 doi: 10.1016/j.addr.2024.115447
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Nursyuhada Azzman. Crohn’s Disease: Potential Drugs for Modulation of AutophagyMedicina 2019; 55(6) doi: 10.3390/medicina55060224
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Kay D. Beharry, Magdalena Latkowska, Arwin M. Valencia, Ahreen Allana, Jatnna Soto, Charles L. Cai, Sergio Golombek, Ivan Hand, Jacob V. Aranda. Factors Influencing Neonatal Gut Microbiome and Health with a Focus on Necrotizing EnterocolitisMicroorganisms 2023; 11(10) doi: 10.3390/microorganisms11102528
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Esther Opeyemi Abolarinwa, Thierry Antoine Awono Edzili, Asmau Niwoye Abubakar, Hadiza Lami Muhammad, Anthony Hussaini Makun. Prebiotic potentials of plant-based foods: modulation of gut microbiota, short-chain fatty acid production, and functional health outcomesNutrire 2026; 51(1) doi: 10.1186/s41110-026-00464-5
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Greg Turner, Michael O’Grady, Daniel Hudson, Xochitl Morgan, Frank Frizelle, Rachel Purcell. Rectal swabs are a reliable method of assessing the colonic microbiomeInternational Journal of Medical Microbiology 2022; 312(2) doi: 10.1016/j.ijmm.2022.151549
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Zoi Iliodromiti, Anastasia-Rafaella Triantafyllou, Marina Tsaousi, Abraham Pouliakis, Chrysa Petropoulou, Rozeta Sokou, Paraskevi Volaki, Theodora Boutsikou, Nicoletta Iacovidou. Gut Microbiome and Neurodevelopmental Disorders: A Link Yet to Be DisclosedMicroorganisms 2023; 11(2) doi: 10.3390/microorganisms11020487
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Meng-Ling Ouyang, Shu-Peng Zou, Qian Cheng, Xuan Shi, Ya-Zheng Zhao, Ming-Hui Sun. Effect of potassium-competitive acid blockers on human gut microbiota: a systematic review and meta-analysisFrontiers in Pharmacology 2023; 14 doi: 10.3389/fphar.2023.1269125
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Wenhui Wang, Zirou Yu, Xindi Yin, Zijie Wang, Song Xu, Chenyu Shi, Jianjun Zang, Hu Liu, Fenglai Wang. Effect of Dietary Starch-to-Fat Ratio on Lipid Metabolism, Inflammation, and Microbiota of Multiparous Sow and Newborn PigletsAgriculture 2023; 13(5) doi: 10.3390/agriculture13051069
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Aleix Lluansí, Marc Llirós, Robert Carreras-Torres, Anna Bahí, Montserrat Capdevila, Anna Feliu, Laura Vilà-Quintana, Núria Elias-Masiques, Emilio Cueva, Laia Peries, Leyanira Torrealba, Josep Oriol Miquel-Cusachs, Míriam Sàbat, David Busquets, Carmen López, Sílvia Delgado-Aros, Librado Jesús Garcia-Gil, Isidre Elias, Xavier Aldeguer, Chia-Yen Dai. Impact of bread diet on intestinal dysbiosis and irritable bowel syndrome symptoms in quiescent ulcerative colitis: A pilot studyPLOS ONE 2024; 19(2) doi: 10.1371/journal.pone.0297836
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Katherine Bauer Estrada, Natalia Conde-Martínez, Alejandro Acosta-González, Luis Eduardo Díaz-Barrera, Gina Paola Rodríguez-Castaño, María Ximena Quintanilla-Carvajal. Synbiotics of encapsulated Limosilactobacillus fermentum K73 promotes in vitro favorable gut microbiota shifts and enhances short-chain fatty acid production in fecal samples of children with autism spectrum disorderFood Research International 2025; 209 doi: 10.1016/j.foodres.2025.116227
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Wenyang Tao, Wei Liu, Mingzhe Wang, Wanyi Zhou, Jianrong Xing, Jing Xu, Xionge Pi, Xiaotong Wang, Shengmin Lu, Ying Yang. Dendrobium officinale Polysaccharides Better Regulate the Microbiota of Women Than MenFoods 2022; 11(11) doi: 10.3390/foods11111641
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Roya Abedi Soleimani, Payam Gonbari Milani, Aziz Homayouni Rad. The role of gut microbiota on obesity management: a review of the evidenceGastrointestinal Nursing 2024; 22(1) doi: 10.12968/gasn.2024.22.1.26
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Sarah A. Knowler, Anya Shindler, Jennifer L. Wood, Asha Lakkavaram, Colleen J. Thomas, Tania F. de Koning-Ward, Elisa L. Hill-Yardin, Teresa G. Carvalho, Ashley E. Franks. Altered gastrointestinal tract structure and microbiome following cerebral malaria infectionParasitology Research 2023; 122(3) doi: 10.1007/s00436-022-07775-2
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Eun-Ju Im, Chan-Hyeong Lee, Pyong-Gon Moon, Gunassekaran Gowri Rangaswamy, Byungheon Lee, Jae Man Lee, Jae-Chul Lee, Jun-Goo Jee, Jong-Sup Bae, Taeg-Kyu Kwon, Keon-Wook Kang, Myeong-Seon Jeong, Joo-Eun Lee, Hyun-Suk Jung, Hyun-Joo Ro, Sangmi Jun, Wonku Kang, Seung-Yong Seo, Young-Eun Cho, Byoung-Joon Song, Moon-Chang Baek. Sulfisoxazole inhibits the secretion of small extracellular vesicles by targeting the endothelin receptor ANature Communications 2019; 10(1) doi: 10.1038/s41467-019-09387-4
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Nandita Ganesh, Azeena Saleem, Roja Babu, Praveenkumar Kochuthakidiyel Suresh. Gut brain axis and gut microbiome in glioblastoma. Associations, treatment and outcomesMedicine in Microecology 2025; 25 doi: 10.1016/j.medmic.2025.100131
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Ana Isabel Beltrán-Velasco, Vicente Javier Clemente-Suárez. Harnessing Gut Microbiota for Biomimetic Innovations in Health and BiotechnologyBiomimetics 2025; 10(2) doi: 10.3390/biomimetics10020073
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Liting Wan, Lin Li, Xia Zhang, Bing Li, Janette M. Harro, Mark E. Shirtliff. Effects of palm olein and palm stearin on cecal and fecal microbiota of C57BL/6J mice under low and high fat intakesFood Chemistry 2023; 404 doi: 10.1016/j.foodchem.2022.134693
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Wang Anlu, Cai Dongcheng, Zhang He, Li Qiuyi, Zhang Yan, Qiu Yu, Xu Hao, Chen Keji. Using herbal medicine to target the “microbiota-metabolism-immunity” axis as possible therapy for cardiovascular diseasePharmacological Research 2019; 142 doi: 10.1016/j.phrs.2019.02.018
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Yun Zhou, Yun Jie Sheng, Cheng Yan Li, Li Zou, Chao Ying Tong, Yang Zhang, Gang Cao, Dan Shou. Beneficial effect and mechanism of natural resourced polysaccharides on regulating bone metabolism through intestinal flora: A reviewInternational Journal of Biological Macromolecules 2023; 253 doi: 10.1016/j.ijbiomac.2023.127428
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A. A. Masharova, M. S. Arefeva, O. N. Tkacheva. The use of metabiotics in clinical geriatric practice (Guidelines of the Russian Association of Gerontologists and Geriatricians)Russian Journal of Geriatric Medicine 2026; (2) doi: 10.37586/2686-8636-2-2026-164-174
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Konstantinos Valtetsiotis, Alberto Di Martino, Matteo Brunello, Leonardo Tassinari, Claudio D’Agostino, Francesco Traina, Cesare Faldini. The Potential Role of Gut Bacteriome Dysbiosis as a Leading Cause of Periprosthetic Infection: A Comprehensive Literature ReviewMicroorganisms 2023; 11(7) doi: 10.3390/microorganisms11071778
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Shanmukha K, Vasavi Pasupuleti, Krishna Yadav, Shubhamkumar M Baviskar, Madhulika Pradhan, Lalitkumar K. Vora, Dharmendra Kumar Khatri. Natural and Biological Products Therapeutic Potential in Restoring Gut Microbiome: Mechanistic Insights and Clinical ImplicationsProbiotics and Antimicrobial Proteins 2026; 18(4) doi: 10.1007/s12602-025-10796-9
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Yiwei Wang, Bini Wang, Zhenquan Huo, Fuxin Zhang, Yufang Liu. Evaluation of the recovery effects of antibiotic-resistant Lactiplantibacillus plantarum subsp. plantarum ATCC14917 on the antibiotic-disturbed intestinal microbiota using a mice modelJournal of Applied Microbiology 2025; 136(2) doi: 10.1093/jambio/lxaf020
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Zhibo Zeng, Chuxian Quan, Shimeng Zhou, Saisai Gong, Mudassar Iqbal, Muhammad Fakhar-e-Alam Kulyar, Shah Nawaz, Kewei Li, Jiakui Li. Gut microbiota and metabolic modulation by supplementation of polysaccharide-producing Bacillus licheniformis from Tibetan Yaks: A comprehensive multi-omics analysisInternational Journal of Biological Macromolecules 2024; 254 doi: 10.1016/j.ijbiomac.2023.127808
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Monika Gawałko, Dominik Linz, Dobromir Dobrev. Gut-microbiota derived TMAO: A risk factor, a mediator or a bystander in the pathogenesis of atrial fibrillation?IJC Heart & Vasculature 2021; 34 doi: 10.1016/j.ijcha.2021.100818
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Asher Dixon, Kai Robertson, Amanda Yung, Michael Que, Hayden Randall, Don Wellalagodage, Tynan Cox, Dylan Robertson, Cheng Chi, Jing Sun. Efficacy of Probiotics in Patients of Cardiovascular Disease Risk: a Systematic Review and Meta-analysisCurrent Hypertension Reports 2020; 22(9) doi: 10.1007/s11906-020-01080-y
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Shumin Ma, Yanyan Sun, Xueting Zheng, Yang Yang. Gastrodin attenuates perfluorooctanoic acid-induced liver injury by regulating gut microbiota composition in miceBioengineered 2021; 12(2) doi: 10.1080/21655979.2021.2009966
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Kai Wang, Juan Tang, Dan Shen, Yansen Li, Kentaro Nagaoka, Chunmei Li. Bisphenol A Exposure Induces Small Intestine Damage Through Oxidative Stress, Inflammation, and Microbiota Alteration in RatsToxics 2025; 13(5) doi: 10.3390/toxics13050331
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Shaofeng Jiang, Cheng Liang, Xiaowei Wan, Keng Po Lai, Rong Li, Jian Chen, Jiaqi Liu. Integrative analysis reveals the anti-obesity roles of Poria cocos polysaccharides through beneficial effects on gut microbiotaJournal of Functional Foods 2024; 119 doi: 10.1016/j.jff.2024.106308
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Xuejun Zheng, Yahan Zhu, Wen Cui, Zhihui Wang, Chenyan Xia, Yingxin Zhi, Jin Shang, Zhanzheng Zhao. CD4+ T cell count mediates the association between gut microbiota and diabetic kidney disease progressionFrontiers in Cellular and Infection Microbiology 2026; 16 doi: 10.3389/fcimb.2026.1699989
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Andrew J Ordille, Sangita Phadtare. Intensity-specific considerations for exercise for patients with inflammatory bowel diseaseGastroenterology Report 2022; 11 doi: 10.1093/gastro/goad004
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Cheherazade Trouki, Beatrice Campanella, Massimo Onor, Andrea Vornoli, Luisa Pozzo, Vincenzo Longo, Emilia Bramanti. Probing the alterations in mice cecal content due to high-fat dietFood Chemistry 2024; 455 doi: 10.1016/j.foodchem.2024.139856
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Edward Jenner Tettevi, Mahmoud Maina, David Larbi Simpong, Mike Y. Osei-Atweneboana, Augustine Ocloo. A Review of African Medicinal Plants and Functional Foods for the Management of Alzheimer's Disease-related Phenotypes, Treatment of HSV-1 Infection and/or Improvement of Gut MicrobiotaJournal of Evidence-Based Integrative Medicine 2022; 27 doi: 10.1177/2515690X221114657
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Aline Corado Gomes, Christian Hoffmann, João Felipe Mota. The human gut microbiota: Metabolism and perspective in obesityGut Microbes 2018;  doi: 10.1080/19490976.2018.1465157
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Ida Heir Hovland. Kan tarmfloraen hjelpe oss med å forstå og behandle anorexia nervosa?Norsk tidsskrift for ernæring 2021; 19(3) doi: 10.18261/ntfe.19.3.2
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Yunxia Li, Siting Xia, Xiaohan Jiang, Can Feng, Saiming Gong, Jie Ma, Zhengfeng Fang, Jie Yin, Yulong Yin. Gut Microbiota and Diarrhea: An Updated ReviewFrontiers in Cellular and Infection Microbiology 2021; 11 doi: 10.3389/fcimb.2021.625210
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Arthid Thim-uam, Saowapha Surawut, Jiraphorn Issara-Amphorn, Thiranut Jaroonwitchawan, Pratsanee Hiengrach, Piraya Chatthanathon, Alisa Wilantho, Naraporn Somboonna, Tanapat Palaga, Prapaporn Pisitkun, Asada Leelahavanichkul. Leaky-gut enhanced lupus progression in the Fc gamma receptor-IIb deficient and pristane-induced mouse models of lupusScientific Reports 2020; 10(1) doi: 10.1038/s41598-019-57275-0
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Valery Danilenko, Andrey Devyatkin, Mariya Marsova, Madina Shibilova, Rustem Ilyasov, Vladimir Shmyrev. Common Inflammatory Mechanisms in COVID-19 and Parkinson’s Diseases: The Role of Microbiome, Pharmabiotics and Postbiotics in Their PreventionJournal of Inflammation Research 2021;  doi: 10.2147/JIR.S333887
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Zhiwei Wu, Zihan Yang, Chengzhen Lyu, Bo Sun, Ruikai Zhang, Hongbo Li, Jian Chen. Gut microbiota and neoadjuvant chemoradiotherapy in locally advanced rectal cancer: a review of current evidence and emerging insightsTherapeutic Advances in Medical Oncology 2026; 18 doi: 10.1177/17588359251413948
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Domenica Maria Di Palo, Gabriella Garruti, Agostino Di Ciaula, Emilio Molina-Molina, Harshitha Shanmugam, Maria De Angelis, Piero Portincasa. Increased Colonic Permeability and Lifestyles as Contributing Factors to Obesity and Liver SteatosisNutrients 2020; 12(2) doi: 10.3390/nu12020564
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Reza Ghotaslou, Edris Nabizadeh, Mohammad Yousef Memar, Wahid Mina Hama Law, Mahdi Asghari Ozma, Milad Abdi, Mina Yekani, Hiva Kadkhoda, Rasoul hosseinpour, Soleyman Bafadam, Anahita Ghotaslou, Hamed Ebrahimzadeh Leylabadlo, Javad Nezhadi. The metabolic, protective, and immune functions of Akkermansia muciniphilaMicrobiological Research 2023; 266 doi: 10.1016/j.micres.2022.127245
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Hao-Yu Chen, Cheng-Ye Wang, Bin Zhang, Zhao He, Ren-can Yang, Hong-hui Zhang, Qing-quan Hu, Zhi-Yong Zhao, Min Zhao, Nafiu Bala Sanda. Gut microbiota diversity in a dung beetle (Catharsius molossus) across geographical variations and brood ball-mediated microbial transmissionPLOS ONE 2024; 19(6) doi: 10.1371/journal.pone.0304908
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Shuo Li, Xiao-yao Miao, Jin-shui Zhang, Dong-dong Wei, Hua-jin Dong, Rui Xue, Jing-cao Li, Yang Zhang, Xiao-xing Feng, Jin Li, You-zhi Zhang. Far-infrared therapy promotes exercise capacity and glucose metabolism in mice by modulating microbiota homeostasis and activating AMPKScientific Reports 2024; 14(1) doi: 10.1038/s41598-024-67220-5