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For: Gaci N, Borrel G, Tottey W, O’Toole PW, Brugère JF. Archaea and the human gut: New beginning of an old story. World J Gastroenterol 2014; 20(43): 16062-16078 [PMID: 25473158 DOI: 10.3748/wjg.v20.i43.16062]
URL: https://www.wjgnet.com/1007-9327/full/v20/i43/16062.htm
Number Citing Articles
1
Mateus Laguardia-Nascimento, Kelly Moreira Grillo Ribeiro Branco, Marcela Ribeiro Gasparini, Silvia Giannattasio-Ferraz, Laura Rabelo Leite, Flávio Marcos Gomes Araujo, Anna Christina de Matos Salim, Jacques Robert Nicoli, Guilherme Corrêa de Oliveira, Edel Figueiredo Barbosa-Stancioli, Ramy K. Aziz. Vaginal Microbiome Characterization of Nellore Cattle Using Metagenomic AnalysisPLOS ONE 2015; 10(11) doi: 10.1371/journal.pone.0143294
2
Lan Zhao, William C.S. Cho, Jun-Li Luo. Exploring the patient-microbiome interaction patterns for pan-cancerComputational and Structural Biotechnology Journal 2022; 20 doi: 10.1016/j.csbj.2022.06.012
3
A. Krawczyk, T. Gosiewski, B. Zapała, K. Kowalska-Duplaga, D. Salamon. Alterations in intestinal Archaea composition in pediatric patients with Crohn’s disease based on next-generation sequencing – a pilot studyGut Microbes 2023; 15(2) doi: 10.1080/19490976.2023.2276806
4
Abhijit Rathi, Tejal Gaonkar, Debojyoti Dhar, Gopalakrishna Kallapura, Swati Jadhav. Study of amino acids absorption and gut microbiome on consumption of pea protein blended with enzymes-probiotics supplementFrontiers in Nutrition 2024; 11 doi: 10.3389/fnut.2024.1307734
5
Jean Paul Cerna-Vargas, Vadim M. Gumerov, Tino Krell, Igor B. Zhulin. Amine-recognizing domain in diverse receptors from bacteria and archaea evolved from the universal amino acid sensorProceedings of the National Academy of Sciences 2023; 120(42) doi: 10.1073/pnas.2305837120
6
Corina Andrei, Anca Zanfirescu, Victor-Pierre Ormeneanu, Simona Negreș. Evaluating the Efficacy of Secondary Metabolites in Antibiotic-Induced Dysbiosis: A Narrative Review of Preclinical StudiesAntibiotics 2025; 14(2) doi: 10.3390/antibiotics14020138
7
Rosario Lucas López, María José Grande Burgos, Antonio Gálvez, Rubén Pérez Pulido. The human gastrointestinal tract and oral microbiota in inflammatory bowel disease: a state of the science reviewAPMIS 2017; 125(1) doi: 10.1111/apm.12609
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Christoph Hoegenauer, Heinz F. Hammer, Alexander Mahnert, Christine Moissl-Eichinger. Methanogenic archaea in the human gastrointestinal tractNature Reviews Gastroenterology & Hepatology 2022; 19(12) doi: 10.1038/s41575-022-00673-z
9
Sonja Vanderhaeghen, Christophe Lacroix, Clarissa Schwab, Abelardo Margolles. Methanogen communities in stools of humans of different age and health status and co-occurrence with bacteriaFEMS Microbiology Letters 2015; 362(13) doi: 10.1093/femsle/fnv092
10
Alexander K. Umbach, Ashley A. Stegelmeier, Josh D. Neufeld, Carla Porto. Archaea Are Rare and Uncommon Members of the Mammalian Skin MicrobiomemSystems 2021; 6(4) doi: 10.1128/msystems.00642-21
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Enriqueta Garcia-Gutierrez, Lizbeth Sayavedra. Comprehensive Gut Microbiota2022;  doi: 10.1016/B978-0-12-819265-8.00089-9
12
Ruchi Mathur, Gillian M Barlow. Obesity and the microbiomeExpert Review of Gastroenterology & Hepatology 2015; 9(8) doi: 10.1586/17474124.2015.1051029
13
Sebastian D. Burz, Magali Monnoye, Catherine Philippe, William Farin, Vlad Ratziu, Francesco Strozzi, Jean-Michel Paillarse, Laurent Chêne, Hervé M. Blottière, Philippe Gérard. Fecal Microbiota Transplant from Human to Mice Gives Insights into the Role of the Gut Microbiota in Non-Alcoholic Fatty Liver Disease (NAFLD)Microorganisms 2021; 9(1) doi: 10.3390/microorganisms9010199
14
Saber Khelaifia, Pilliol Virginie, Souad Belkacemi, Herve Tassery, Elodie Terrer, Gérard Aboudharam. Culturing the Human Oral Microbiota, Updating Methodologies and Cultivation TechniquesMicroorganisms 2023; 11(4) doi: 10.3390/microorganisms11040836
15
Oleg S. Medvedev, Anastasiia Yu. Ivanova, Margarita A. Belousova, Stepan V. Toshchakov, Anastasia S. Krylova, Ivan V. Shirokov, Olga N. Obolenskaya, Tatiana A. Kuropatkina, Grigorii N. Bondarenko, Ilya B. Gartseev. Molecular Hydrogen in Health and DiseaseAdvances in Biochemistry in Health and Disease 2024; 27 doi: 10.1007/978-3-031-47375-3_20
16
Justyna Paulina Wielgosz-Grochowska, Nicole Domanski, Małgorzata Ewa Drywień. Identification of SIBO Subtypes along with Nutritional Status and Diet as Key Elements of SIBO TherapyInternational Journal of Molecular Sciences 2024; 25(13) doi: 10.3390/ijms25137341
17
Prem Prashant Chaudhary, Nadia Gaci, Guillaume Borrel, Paul W. O’Toole, Jean-François Brugère. Molecular methods for studying methanogens of the human gastrointestinal tract: current status and future directionsApplied Microbiology and Biotechnology 2015; 99(14) doi: 10.1007/s00253-015-6739-2
18
Beata Tokarz-Deptuła, Paulina Dudziak, Natalia Gurgacz, Wiesław Deptuła. Mikrobiom Przewodu Pokarmowego Człowieka – Wybrane DanePostępy Mikrobiologii - Advancements of Microbiology 2022; 61(4) doi: 10.2478/am-2022-023
19
Ahmed K. El Sherif, Dina M. Saleh, Omar A. Youssef. Children’s Inflammatory Bowel Disease and Methanogenic Archaea: Links to Disease Classification and ActivityBulletin of Pioneering Researches of Medical and Clinical Science 2022; 2(1) doi: 10.51847/I0V1glGDBV
20
Cynthia Maria Chibani, Alexander Mahnert, Guillaume Borrel, Alexandre Almeida, Almut Werner, Jean-François Brugère, Simonetta Gribaldo, Robert D. Finn, Ruth A. Schmitz, Christine Moissl-Eichinger. A catalogue of 1,167 genomes from the human gut archaeomeNature Microbiology 2021; 7(1) doi: 10.1038/s41564-021-01020-9
21
Ami Diakite, Grégory Dubourg, Didier Raoult. Updating the repertoire of cultured bacteria from the human beingMicrobial Pathogenesis 2021; 150 doi: 10.1016/j.micpath.2020.104698
22
Nombulelo Mntambo, Thilona Arumugam, Ashiq Pramchand, Kamlen Pillay, Veron Ramsuran. A Review of Global Patterns in Gut Microbiota Composition, Health and Disease: Locating South Africa in the ConversationMicroorganisms 2025; 13(12) doi: 10.3390/microorganisms13122831
23
Minghong Jiang, Andres Gomez, Davis M. Seelig, Daniel D. Gallaher. Prune (dried plum) consumption does not reduce colonic tumor formation but drives beneficial changes in the gut microbiome of ratsFood & Function 2026; 17(7) doi: 10.1039/D5FO03398E
24
Agata Anna Cisek, Edyta Szymańska, Tamara Aleksandrzak-Piekarczyk, Bożena Cukrowska. The Role of Methanogenic Archaea in Inflammatory Bowel Disease—A ReviewJournal of Personalized Medicine 2024; 14(2) doi: 10.3390/jpm14020196
25
Shrikant S. Bhute, Saroj S. Ghaskadbi, Yogesh S. Shouche. Mining of Microbial Wealth and MetaGenomics2017;  doi: 10.1007/978-981-10-5708-3_8
26
Zainab Alyousif, Daniela Rivero Mendoza, Jérémie Auger, Vanessa De Carvalho, Samantha Amos, Charles Sims, Wendy J Dahl. Gastrointestinal Tolerance and Microbiome Response to Snacks Fortified with Pea Hull Fiber: A Randomized Trial in Older AdultsCurrent Developments in Nutrition 2020; 4(2) doi: 10.1093/cdn/nzaa005
27
Maximilian Mora, Alexandra Perras, Tatiana A. Alekhova, Lisa Wink, Robert Krause, Alina Aleksandrova, Tatiana Novozhilova, Christine Moissl-Eichinger. Resilient microorganisms in dust samples of the International Space Station—survival of the adaptation specialistsMicrobiome 2016; 4(1) doi: 10.1186/s40168-016-0217-7
28
J.M.W. Wong, E.M. Comelli, C.W.C. Kendall, J.L. Sievenpiper, J.C. Noronha, D.J.A. Jenkins. The Microbiota in Gastrointestinal Pathophysiology2017;  doi: 10.1016/B978-0-12-804024-9.00022-7
29
Burkhardt Flemer, Nadia Gaci, Guillaume Borrel, Ian R. Sanderson, Prem P. Chaudhary, William Tottey, Paul W. O'Toole, Jean-François Brugère. Fecal microbiota variation across the lifespan of the healthy laboratory ratGut Microbes 2017; 8(5) doi: 10.1080/19490976.2017.1334033
30
Alexey S. Syutkin, Marleen van Wolferen, Alexey K. Surin, Sonja‐Verena Albers, Mikhail G. Pyatibratov, Oleg V. Fedorov, Tessa E. F. Quax. Salt‐dependent regulation of archaellins in Haloarcula marismortuiMicrobiologyOpen 2019; 8(5) doi: 10.1002/mbo3.718
31
Nicholas D. Youngblut, Georg H. Reischer, Silke Dauser, Sophie Maisch, Chris Walzer, Gabrielle Stalder, Andreas H. Farnleitner, Ruth E. Ley. Vertebrate host phylogeny influences gut archaeal diversityNature Microbiology 2021; 6(11) doi: 10.1038/s41564-021-00980-2
32
Cristian Morales, Gabriel Rojas, Camilo Rebolledo, Marcelo Rojas-Herrera, Raúl Arias-Carrasco, Sara Cuadros-Orellana, Vinicius Maracaja-Coutinho, Kathleen Saavedra, Pamela Leal, Fernando Lanas, Luis A. Salazar, Nicolás Saavedra. Characterization of microbial communities from gut microbiota of hypercholesterolemic and control subjectsFrontiers in Cellular and Infection Microbiology 2022; 12 doi: 10.3389/fcimb.2022.943609
33
Agata Anna Cisek, Edyta Szymańska, Aldona Wierzbicka-Rucińska, Tamara Aleksandrzak-Piekarczyk, Bożena Cukrowska. Methanogenic Archaea in the Pediatric Inflammatory Bowel Disease in Relation to Disease Type and ActivityInternational Journal of Molecular Sciences 2024; 25(1) doi: 10.3390/ijms25010673
34
Onur Kırtel, Eveline Lescrinier, Wim Van den Ende, Ebru Toksoy Öner. Discovery of fructans in ArchaeaCarbohydrate Polymers 2019; 220 doi: 10.1016/j.carbpol.2019.05.064
35
Quentin Perraud, Vanessa Sperandio, Jorn Coers. Enterohemorrhagic E. coli (EHEC) and the microbiomePLOS Pathogens 2025; 21(6) doi: 10.1371/journal.ppat.1013224
36
Sayaka Fujio-Vejar, Yessenia Vasquez, Pamela Morales, Fabien Magne, Patricia Vera-Wolf, Juan A. Ugalde, Paola Navarrete, Martin Gotteland. The Gut Microbiota of Healthy Chilean Subjects Reveals a High Abundance of the Phylum VerrucomicrobiaFrontiers in Microbiology 2017; 8 doi: 10.3389/fmicb.2017.01221
37
Ji Eun Kim, Yun Ju Choi, Su Jin Lee, Jeong Eun Gong, Ji Eun Seong, So Hae Park, Dae Youn Hwang, Muhammad Jan. Evaluation of Deodorizing Effects of Saccharina japonica in 10-Month-Old ICR Mice Using a Novel Odor Marker Associated with AgingEvidence-Based Complementary and Alternative Medicine 2022; 2022 doi: 10.1155/2022/1410144
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D. Swati. Biocommunication of Archaea2017;  doi: 10.1007/978-3-319-65536-9_17
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Miguel A. Ortega, Oscar Fraile-Martínez, Irene Naya, Natalio García-Honduvilla, Melchor Álvarez-Mon, Julia Buján, Ángel Asúnsolo, Basilio de la Torre. Type 2 Diabetes Mellitus Associated with Obesity (Diabesity). The Central Role of Gut Microbiota and Its Translational ApplicationsNutrients 2020; 12(9) doi: 10.3390/nu12092749
40
Nour El Houda Mathlouthi, Hamadou Oumarou Hama, Imen Belguith, Slim Charfi, Tahya Boudawara, Jean-Christophe Lagier, Leila Ammar Keskes, Ghiles Grine, Radhouane Gdoura. Colorectal Cancer Archaeome: A Metagenomic Exploration, TunisiaCurrent Issues in Molecular Biology 2023; 45(9) doi: 10.3390/cimb45090477
41
Nadia Gaci, Prem Prashant Chaudhary, William Tottey, Monique Alric, Jean-François Brugère. Functional amplification and preservation of human gut microbiotaMicrobial Ecology in Health and Disease 2017; 28(1) doi: 10.1080/16512235.2017.1308070
42
Jieting Peng, Xun Xiao, Min Hu, Xiangyu Zhang. Interaction between gut microbiome and cardiovascular diseaseLife Sciences 2018; 214 doi: 10.1016/j.lfs.2018.10.063
43
François Blachier. Metabolism of Alimentary Compounds by the Intestinal Microbiota and Health2023;  doi: 10.1007/978-3-031-26322-4_2
44
Lenka Tomasova, Leszek Dobrowolski, Halina Jurkowska, Maria Wróbel, Tomasz Huc, Karol Ondrias, Ryszard Ostaszewski, Marcin Ufnal. Intracolonic hydrogen sulfide lowers blood pressure in ratsNitric Oxide 2016; 60 doi: 10.1016/j.niox.2016.09.007
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G. Grine, M. A. Boualam, M. Drancourt. Methanobrevibacter smithii, a methanogen consistently colonising the newborn stomachEuropean Journal of Clinical Microbiology & Infectious Diseases 2017; 36(12) doi: 10.1007/s10096-017-3084-7
46
Lisa Gieg, Mohita Sharma, Jennifer Sargent, Yin Shen, Hitesh Bagaria, Danielle Kiesman, Trevor Place. Synergistic Effect of Biocide and Biodispersant to Mitigate Microbiologically Influenced Corrosion in Crude Oil Transmission PipelinesCORROSION 2020 2020;  doi: 10.5006/C2020-15090
47
Zhaoxi Liu, Meihua Liu, Jing Meng, Lushan Wang, Min Chen. A review of the interaction between diet composition and gut microbiota and its impact on associated diseaseJournal of Future Foods 2024; 4(3) doi: 10.1016/j.jfutfo.2023.07.004
48
David Avelar Rodriguez, Paul MacDaragh Ryan, Eamonn Martin Mary Quigley. Textbook of Pediatric Gastroenterology, Hepatology and Nutrition2022;  doi: 10.1007/978-3-030-80068-0_42
49
Charlotte Deschamps, Alexandre Tronel, Elodie Bailly, Maurice Raoul Sohnagou Tanfede, Sophie Gilibert, Sylvain Denis, Thomas Soranzo, Tom Van De Wiele, Ludovica Marinelli, Stéphanie Blanquet-Diot, Hauke Smidt. Small intestinal microbiome, the underrated maestro of SIMO diseaseFEMS Microbiology Reviews 2026; 50 doi: 10.1093/femsre/fuag016
50
Sayantanee Ray, Prakash Shankaran. Nutrition and the gut microbiome: a symbiotic dialogue influencing health and diseaseFrontiers in Nutrition 2026; 13 doi: 10.3389/fnut.2026.1761992
51
Christine Moissl-Eichinger, Alexander J. Probst, Giovanni Birarda, Anna Auerbach, Kaisa Koskinen, Peter Wolf, Hoi-Ying N. Holman. Human age and skin physiology shape diversity and abundance of Archaea on skinScientific Reports 2017; 7(1) doi: 10.1038/s41598-017-04197-4
52
B. Foxman, E. T. Martin. Use of the Microbiome in the Practice of Epidemiology: A Primer on -Omic TechnologiesAmerican Journal of Epidemiology 2015; 182(1) doi: 10.1093/aje/kwv102
53
Mark Pimentel, Richard J. Saad, Millie D. Long, Satish S. C. Rao. ACG Clinical Guideline: Small Intestinal Bacterial OvergrowthAmerican Journal of Gastroenterology 2020; 115(2) doi: 10.14309/ajg.0000000000000501
54
Mohamed Zeineldin, Ameer Megahed, Benjamin Blair, Brian Aldridge, James Lowe. Metagenomic Analysis of the Fecal Archaeome in Suckling Piglets Following Perinatal Tulathromycin MetaphylaxisAnimals 2021; 11(6) doi: 10.3390/ani11061825
55
Wajdi Ben Hania, Nathalie Ballet, Pascal Vandeckerkove, Bernard Ollivier, Paul W. O’Toole, Jean-François Brugère. Archaea - New Biocatalysts, Novel Pharmaceuticals and Various Biotechnological Applications2017;  doi: 10.5772/intechopen.69945
56
Olabisi Oluwabukola Coker, Jun Yu. Inflammation, Infection, and Microbiome in CancersPhysiology in Health and Disease 2021;  doi: 10.1007/978-3-030-67951-4_2
57
Joon Yong Kim, Tae Woong Whon, Mi Young Lim, Yeon Bee Kim, Namhee Kim, Min-Sung Kwon, Juseok Kim, Se Hee Lee, Hak-Jong Choi, In-Hyun Nam, Won-Hyong Chung, Jung-Ha Kim, Jin-Woo Bae, Seong Woon Roh, Young-Do Nam. The human gut archaeome: identification of diverse haloarchaea in Korean subjectsMicrobiome 2020; 8(1) doi: 10.1186/s40168-020-00894-x
58
Abigail S. Gancz, Andrew G. Farrer, Michelle P. Nixon, Sterling Wright, Luis Arriola, Christina Adler, Emily R. Davenport, Neville Gully, Alan Cooper, Kate Britton, Keith Dobney, Justin D. Silverman, Laura S. Weyrich. Ancient dental calculus reveals oral microbiome shifts associated with lifestyle and disease in Great BritainNature Microbiology 2023; 8(12) doi: 10.1038/s41564-023-01527-3
59
Riccardo Farinella, Cosmeri Rizzato, Daria Bottai, Alice Bedini, Federica Gemignani, Stefano Landi, Giulia Peduzzi, Sara Rosati, Antonella Lupetti, Armando Cuttano, Francesca Moscuzza, Cristina Tuoni, Luca Filippi, Massimiliano Ciantelli, Arianna Tavanti, Daniele Campa. Maternal anthropometric variables and clinical factors shape neonatal microbiomeScientific Reports 2022; 12(1) doi: 10.1038/s41598-022-06792-6
60
Panagiotis S Adam, Guillaume Borrel, Céline Brochier-Armanet, Simonetta Gribaldo. The growing tree of Archaea: new perspectives on their diversity, evolution and ecologyThe ISME Journal 2017; 11(11) doi: 10.1038/ismej.2017.122
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Jie Yang, Zhisheng Yu, Bobo Wang, Fabrice Ndayisenga. Gut region induces gastrointestinal microbiota community shift in Ujimqin sheep (Ovis aries): from a multi‐domain perspectiveEnvironmental Microbiology 2021; 23(12) doi: 10.1111/1462-2920.15782
62
Dorothy K. Superdock, Wei Zhang, Angela C. Poole. Processing and storage methods affect oral and gut microbiome compositionFrontiers in Microbiology 2023; 14 doi: 10.3389/fmicb.2023.1253570
63
Avehi Singh, Joshua J. Faber-Hammond, Cynthia F. O'Rourke, Suzy C.P. Renn. Gut microbial diversity increases with social rank in the African cichlid fish, Astatotilapia burtoniAnimal Behaviour 2019; 152 doi: 10.1016/j.anbehav.2019.04.003
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Cheick Oumar Guindo, Lynda Amir, Carine Couderc, Michel Drancourt, Ghiles Grine. Rapid identification of clinically interesting methanogens using an improved MALDI-TOF-MS assay Access Microbiology 2022; 4(7) doi: 10.1099/acmi.0.000372
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Rokhsareh Mohammadzadeh, Alexander Mahnert, Stefanie Duller, Christine Moissl-Eichinger. Archaeal key-residents within the human microbiome: characteristics, interactions and involvement in health and diseaseCurrent Opinion in Microbiology 2022; 67 doi: 10.1016/j.mib.2022.102146
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Gillian M. Barlow, Allen Yu, Ruchi Mathur. Role of the Gut Microbiome in Obesity and Diabetes MellitusNutrition in Clinical Practice 2015; 30(6) doi: 10.1177/0884533615609896
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Matan Shelomi, Shih-Shun Lin, Li-Yu Liu. Transcriptome and microbiome of coconut rhinoceros beetle (Oryctes rhinoceros) larvaeBMC Genomics 2019; 20(1) doi: 10.1186/s12864-019-6352-3
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Dorines Rosario, Gholamreza Bidkhori, Sunjae Lee, Janis Bedarf, Falk Hildebrand, Emmanuelle Le Chatelier, Mathias Uhlen, Stanislav Dusko Ehrlich, Gordon Proctor, Ullrich Wüllner, Adil Mardinoglu, Saeed Shoaie. Systematic analysis of gut microbiome reveals the role of bacterial folate and homocysteine metabolism in Parkinson’s diseaseCell Reports 2021; 34(9) doi: 10.1016/j.celrep.2021.108807
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Àngela Vidal-Verdú, Daniel Torrent, Alba Iglesias, Adriel Latorre-Pérez, Christian Abendroth, Paola Corbín-Agustí, Juli Peretó, Manuel Porcar. The highly differentiated gut of Pachnoda marginata hosts sequential microbiomes: microbial ecology and potential applicationsnpj Biofilms and Microbiomes 2024; 10(1) doi: 10.1038/s41522-024-00531-7
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Lei Xie, Yuhui Zhang, Jinshu Gao, Xinyi Li, Hongyuan Wang. Nitrate exposure induces intestinal microbiota dysbiosis and metabolism disorder in Bufo gargarizans tadpolesEnvironmental Pollution 2020; 264 doi: 10.1016/j.envpol.2020.114712
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Sohini Mukhopadhyay, Sunaina Sunaina, Tanuja Mohanty, Ankita Das, Arka Jyoti De, Isha Dwivedi, Palok Aich. Microbial Diversity in the Genomic Era2024;  doi: 10.1016/B978-0-443-13320-6.00031-7
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Pilar Calo-Mata, Jose Manuel Ageitos, Karola Böhme, Jorge Barros-Velázquez. New Weapons to Control Bacterial Growth2016;  doi: 10.1007/978-3-319-28368-5_12
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Larica Mohanta, Bhaskar C. Das, Manorama Patri. Microbial communities modulating brain functioning and behaviors in zebrafish: A mechanistic approachMicrobial Pathogenesis 2020; 145 doi: 10.1016/j.micpath.2020.104251
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Wenkang Gao, Yixin Zhu, Jin Ye, Huikuan Chu. Gut non-bacterial microbiota contributing to alcohol-associated liver diseaseGut Microbes 2021; 13(1) doi: 10.1080/19490976.2021.1984122
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Hong Yao, Bernadine M. Flanagan, Barbara A. Williams, Deirdre Mikkelsen, Michael J. Gidley. Lactate and buyrate proportions, methanogen growth and gas production during in vitro dietary fibre fermentation all depend on fibre concentrationFood Hydrocolloids 2023; 134 doi: 10.1016/j.foodhyd.2022.108061
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Dora Alejandra Trejo-Ramos, César Omar Rodríguez-Arana, Roberto Cruz-Flores, Mónica Hernández-Rodríguez. Effect of Oregano Essential Oil on Growth and Composition of Gut Prokaryote Microbiota on Striped Bass (Morone saxatilis)Microorganisms 2025; 13(2) doi: 10.3390/microorganisms13020264
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Jun Sun, Yinglin Xia. Microbiome in Colonic CarcinogenesisComprehensive Physiology 2023; 13(3) doi: 10.1002/j.2040-4603.2023.tb00265.x
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Prashant K. Dhakephalkar, Om Prakash, Vikram B. Lanjekar, Manasi P. Tukdeo, Dilip R. Ranade. Microbial Diversity in Ecosystem Sustainability and Biotechnological Applications2019;  doi: 10.1007/978-981-13-8487-5_21
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Maria J. Villanueva-Millan, Gabriela Leite, Jiajing Wang, Walter Morales, Gonzalo Parodi, Maya L. Pimentel, Gillian M. Barlow, Ruchi Mathur, Ali Rezaie, Maritza Sanchez, Sarah Ayyad, Daniel Cohrs, Christine Chang, Mohamad Rashid, Ava Hosseini, Alyson Fiorentino, Stacy Weitsman, Brennan Chuang, Bianca Chang, Nipaporn Pichetshote, Mark Pimentel. Methanogens and Hydrogen Sulfide Producing Bacteria Guide Distinct Gut Microbe Profiles and Irritable Bowel Syndrome SubtypesAmerican Journal of Gastroenterology 2022; 117(12) doi: 10.14309/ajg.0000000000001997
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Francesco Candeliere, Laura Sola, Stefano Raimondi, Maddalena Rossi, Alberto Amaretti. Good and bad dispositions between archaea and bacteria in the human gut: New insights from metagenomic survey and co-occurrence analysisSynthetic and Systems Biotechnology 2024; 9(1) doi: 10.1016/j.synbio.2023.12.007
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Farishta Saifi, Benscar Jeoboam, Michelle Demory Beckler, Joshua M Costin. The Association Between Lactational Infective Mastitis and the Microbiome: Development, Onset, and TreatmentsCureus 2024;  doi: 10.7759/cureus.62717
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Marc Cozannet, Guillaume Borrel, Erwan Roussel, Yann Moalic, Maxime Allioux, Amandine Sanvoisin, Laurent Toffin, Karine Alain. New Insights into the Ecology and Physiology of Methanomassiliicoccales from Terrestrial and Aquatic EnvironmentsMicroorganisms 2020; 9(1) doi: 10.3390/microorganisms9010030
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Charlotte Deschamps, Sylvain Denis, Delphine Humbert, Nathalie Priymenko, Sandrine Chalancon, Jana De Bodt, Tom Van de Wiele, Ignacio Ipharraguerre, Inma Alvarez-Acero, Caroline Achard, Emmanuelle Apper, Stéphanie Blanquet-Diot. Canine Mucosal Artificial Colon: development of a new colonic in vitro model adapted to dog sizesApplied Microbiology and Biotechnology 2024; 108(1) doi: 10.1007/s00253-023-12987-2
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Mor N. Lurie-Weinberger, Uri Gophna, Joseph Heitman. Archaea in and on the Human Body: Health Implications and Future DirectionsPLOS Pathogens 2015; 11(6) doi: 10.1371/journal.ppat.1004833
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Guillaume Borrel, Angela McCann, Jennifer Deane, Marta C Neto, Denise B Lynch, Jean- François Brugère, Paul W O’Toole. Genomics and metagenomics of trimethylamine-utilizing Archaea in the human gut microbiomeThe ISME Journal 2017; 11(9) doi: 10.1038/ismej.2017.72
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Yanyan Jiang, Zhongying Yuan, Yujuan Shen, Bruce A. Rosa, John Martin, Shengkui Cao, Yanjiao Zhou, Makedonka Mitreva, Jianping Cao. Alteration of the fecal microbiota in Chinese patients with Schistosoma japonicum infectionParasite 2021; 28 doi: 10.1051/parasite/2020074
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R. R. Yenikeyev, N. Y. Tatarinova, L. M. Zakharchuk. Mechanisms of Resistance to Clinically Significant Antibiotics of Bacterial Strains of the Genus Bacillus Isolated from Samples from the International Space StationMoscow University Biological Sciences Bulletin 2020; 75(4) doi: 10.3103/S0096392520040045
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Jun Sun, Yinglin Xia. Comprehensive Physiology2023;  doi: 10.1002/cphy.c210052
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Sanbao Zhang, Qinyang Jiang, Junjie Ma, Jianwei Zou, Fan Wang, Feifei Lv, Yanna Huang, Yongcheng Wang, Ziye Xu. A Single‐Cell Transcriptomic Atlas of the Ovine Rumen Microbiome Characterizes Lineage‐Specific Metabolic Shifts Associated with Host Heat ToleranceAdvanced Science 2026;  doi: 10.1002/advs.76152
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Dini Hu, Jianming Yang, Yingjie Qi, Boling Li, Kai Li, Kai Meng Mok. Metagenomic Analysis of Fecal Archaea, Bacteria, Eukaryota, and Virus in Przewalski's Horses Following Anthelmintic TreatmentFrontiers in Veterinary Science 2021; 8 doi: 10.3389/fvets.2021.708512
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Yuewen Zhou, Enfu Tao. The role of intestinal gases in pediatric functional constipation: a narrative review of pathophysiology and emerging therapeuticsFrontiers in Nutrition 2026; 12 doi: 10.3389/fnut.2025.1694831
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